RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 C17orf50Q8WW18 174 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 CCL17Q92583 94 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 TMEM54Q969K7 222 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 CREB3L1Q96BA8 519 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 ARL5BQ96KC2 179 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 NAP1L5Q96NT1 182 aaPredicted RBP2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 RBBP8Q99708 897 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 KCNS3Q9BQ31 491 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 CRLF2Q9HC73 371 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 MS4A12Q9NXJ0 267 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 VPREB3Q9UKI3 123 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 FBXO5Q9UKT4 447 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 USH1CQ9Y6N9 552 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 TANC2Q9HCD6 1990 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 IGLV3-9A0A075B6K5 115 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 IGHV1-69DA0A0B4J2H0 117 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 CEACAM18A8MTB9 384 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 RNASEK-C17orf49H0YIS7 233 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 MRPL33O75394 65 aaKnown RBP2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 OR7A10O76100 309 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 IGHV1-69P01742 117 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 KLK1P06870 262 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 YAP1P46937 504 aaKnown RBP2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 RORCP51449 518 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 RAP1GDS1P52306 607 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 SLC35A2P78381 396 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 H3F3AP84243 136 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 ZNF92Q03936 586 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 RBMY1FQ15415 496 aaKnown RBP2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 HSP90AA5PQ58FG0 334 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 SPIN3Q5JUX0 258 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 HDDC2Q7Z4H3 204 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 VSTM4Q8IW00 320 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 ZNF101Q8IZC7 436 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 ZNF675Q8TD23 568 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 C10orf82Q8WW14 230 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 RAB1CQ92928 201 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 ISOC1Q96CN7 298 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 SERPINB12Q96P63 405 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 PPP1R2P1Q96PQ5 205 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 KCTD14Q9BQ13 255 aaPredicted RBP2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 NABP2Q9BQ15 211 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 EFCAB11Q9BUY7 163 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 TBL1XR1Q9BZK7 514 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 IL22Q9GZX6 179 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 OR51B6Q9H340 312 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 SAV1Q9H4B6 383 aaPredicted RBP2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 TAAR3PQ9P1P4 343 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 CFL2Q9Y281 166 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 LRP2P98164 4655 aa2.19□□□□□ -2.06
TOPBP1-206ENST00000508524 A0A0U1RQV1 116 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 A0A1W2PRD5 423 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 A0A1W2PRF3 423 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 A0A1W2PRM7 423 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 LGALS9O00182 355 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 UPK1AO00322 258 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 BANF1O75531 89 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 SCGNO76038 276 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 IGHV1-46P01743 117 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 HLA-HP01893 362 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 GYPCP04921 128 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 OR8G3PP0DMU2 310 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 CCL2P13500 99 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 CBR1P16152 277 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 CSNK2A2P19784 350 aaPredicted RBP2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 GLRXP35754 106 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 SERPINB5P36952 375 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 CFHR2P36980 270 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 TGFBR2P37173 567 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 UGT2B15P54855 530 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 MRPS22P82650 360 aaKnown RBP2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 IRF8Q02556 426 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 EMX1Q04741 257 aaPredicted RBP2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 MAB21L1Q13394 359 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 PDK3Q15120 406 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 TGFBIQ15582 683 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 OR4D1Q15615 310 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 SMUG1Q53HV7 270 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 FAM201AQ5SY85 155 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 PDZK1Q5T2W1 519 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 CCNJQ5T5M9 372 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 STEAP4Q687X5 459 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 MED27Q6P2C8 311 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 UNQ9165/PRO28630Q6UXU0 137 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 TMPPEQ6ZT21 453 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 CCDC121Q6ZUS5 278 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 LHFPL3Q86UP9 236 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 COMTD1Q86VU5 262 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 LRRC28Q86X40 367 aaPredicted RBP2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 RTN4IP1Q8WWV3 396 aaPredicted RBP2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 ANKRD7Q92527 254 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 RORBQ92753 470 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 TM2D3Q9BRN9 247 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 PARP12Q9H0J9 701 aaKnown RBP2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 CENPHQ9H3R5 247 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 NIPAL2Q9H841 368 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 SDHAF3Q9NRP4 125 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 TAS2R13Q9NYV9 303 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 EMC3Q9P0I2 261 aa2.18□□□□□ -2.06
TOPBP1-206ENST00000508524 OR5V1Q9UGF6 321 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms