RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 RNF133Q8WVZ7 376 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 TOP1MTQ969P6 601 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 TMIGD2Q96BF3 282 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 MYO15BQ96JP2 1530 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 UPK3BQ9BT76 320 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 FAAP24Q9BTP7 215 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 XKR8Q9H6D3 395 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 C11orf49Q9H6J7 331 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 RPRD1BQ9NQG5 326 aaKnown RBP0.51□□□□□ -2.33
SMAD1-203ENST00000502342 BABAM2Q9NXR7 383 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 SCML1Q9UN30 329 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 SOX21Q9Y651 276 aaPredicted RBP0.51□□□□□ -2.33
SMAD1-203ENST00000502342 ALG5Q9Y673 324 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 ZFHX2Q9C0A1 2572 aaPredicted RBP0.5□□□□□ -2.33
SMAD1-203ENST00000502342 GOLGA8IPA6NC78 632 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 MGAT4DA6NG13 374 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 C11orf86A6NJI1 115 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 E7EWF7 191 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 H3BPC8 53 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 hCG_2039718K7EN88 272 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 KDELR3O43731 214 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 TPM2P07951 284 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 STAG3L2P0CL84 134 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 ESDP10768 282 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 SULT1A2P50226 295 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 DYNLL1P63167 89 aaKnown RBP0.5□□□□□ -2.33
SMAD1-203ENST00000502342 ZNF90Q03938 601 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 RELAQ04206 551 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 FAM162BQ5T6X4 162 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 HES3Q5TGS1 186 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 EBLN2Q6P2I7 272 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 Q6ZTI0 123 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 PID1Q7Z2X4 250 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 ASCC1Q8N9N2 400 aaKnown RBP0.5□□□□□ -2.33
SMAD1-203ENST00000502342 OR5D18Q8NGL1 313 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 LHFPL5Q8TAF8 219 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 FGF13Q92913 245 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 PGLYRP3Q96LB9 341 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 MED18Q9BUE0 208 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 C16orf95Q9H693 158 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 TMBIM4Q9HC24 238 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 DDX18Q9NVP1 670 aaKnown RBP0.5□□□□□ -2.33
SMAD1-203ENST00000502342 TAS2R13Q9NYV9 303 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 PRO2289Q9P1D8 64 aa0.5□□□□□ -2.33
SMAD1-203ENST00000502342 DNMT1P26358 1616 aaKnown RBP0.49□□□□□ -2.33
SMAD1-203ENST00000502342 CLUHO75153 1309 aa0.49□□□□□ -2.33
SMAD1-203ENST00000502342 C2orf74A8MZ97 194 aa0.49□□□□□ -2.33
SMAD1-203ENST00000502342 GNRH2O43555 120 aa0.49□□□□□ -2.33
SMAD1-203ENST00000502342 ZMPSTE24O75844 475 aa0.49□□□□□ -2.33
SMAD1-203ENST00000502342 CDK14O94921 469 aa0.49□□□□□ -2.33
SMAD1-203ENST00000502342 VAPBO95292 243 aa0.49□□□□□ -2.33
SMAD1-203ENST00000502342 IGHV3-30-3P0DP02 117 aa0.49□□□□□ -2.33
SMAD1-203ENST00000502342 PRB4P10163 310 aaPredicted RBP0.49□□□□□ -2.33
SMAD1-203ENST00000502342 BGNP21810 368 aa0.49□□□□□ -2.33
SMAD1-203ENST00000502342 PDGFRLQ15198 375 aa0.49□□□□□ -2.33
SMAD1-203ENST00000502342 LRRC28Q86X40 367 aaPredicted RBP0.49□□□□□ -2.33
SMAD1-203ENST00000502342 SYS1Q8N2H4 156 aa0.49□□□□□ -2.33
SMAD1-203ENST00000502342 OR13C9Q8NGT0 318 aa0.49□□□□□ -2.33
SMAD1-203ENST00000502342 SPACA4Q8TDM5 124 aa0.49□□□□□ -2.33
SMAD1-203ENST00000502342 PRSS27Q9BQR3 290 aa0.49□□□□□ -2.33
SMAD1-203ENST00000502342 ZNF426Q9BUY5 554 aa0.49□□□□□ -2.33
SMAD1-203ENST00000502342 NCOR1P1Q9H4R4 102 aa0.49□□□□□ -2.33
SMAD1-203ENST00000502342 SNX12Q9UMY4 172 aa0.49□□□□□ -2.33
SMAD1-203ENST00000502342 MRPS16Q9Y3D3 137 aaKnown RBP0.49□□□□□ -2.33
SMAD1-203ENST00000502342 TNIKQ9UKE5 1360 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 ADAMTSL1Q8N6G6 1762 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 IGKV3D-7A0A0C4DH55 119 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 IGKV3OR2-268A0A0C4DH90 116 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 GOLGA6L7A0A1B0GV03 622 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 GRIFINA4D1Z8 144 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 LINC00862A6NCI5 91 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 TMEM235A6NFC5 223 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 RFPL4AA6NLU0 287 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 A8MUN3 132 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 C8orf87E5RJ46 101 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 RFPL4AL1F8VTS6 287 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 ZW10O43264 779 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 CYTH3O43739 400 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 HMMRO75330 724 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 SNAI1O95863 264 aaPredicted RBP0.48□□□□□ -2.33
SMAD1-203ENST00000502342 CRYGCP07315 174 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 ZNF705DP0CH99 300 aaPredicted RBP0.48□□□□□ -2.33
SMAD1-203ENST00000502342 ZNF705BP0CI00 300 aaPredicted RBP0.48□□□□□ -2.33
SMAD1-203ENST00000502342 CTSEP14091 401 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 IL9P15248 144 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 RCVRNP35243 200 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 ACTR1BP42025 376 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 ATP5J2P56134 94 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 VSNL1P62760 191 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 SLC38A11Q08AI6 406 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 PAFAH1B3Q15102 231 aaKnown RBP0.48□□□□□ -2.33
SMAD1-203ENST00000502342 PSG3Q16557 428 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 SSX6Q7RTT6 188 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 OR8B12Q8NGG6 310 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 OR11L1Q8NGX0 322 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 LGALS14Q8TCE9 139 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 IFT81Q8WYA0 676 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 CATSPER2Q96P56 530 aa0.48□□□□□ -2.33
SMAD1-203ENST00000502342 ZNF471Q9BX82 626 aaPredicted RBP0.48□□□□□ -2.33
SMAD1-203ENST00000502342 CDCA4Q9BXL8 241 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms