RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 RPL36A-HNRNPH2H7BZ11 118 aa13.14□□□□□ -0.31
C4A-259ENST00000498271 M0QZ24 198 aa13.14□□□□□ -0.31
C4A-259ENST00000498271 CA2P00918 260 aa13.14□□□□□ -0.31
C4A-259ENST00000498271 KIR3DL2P43630 455 aa13.14□□□□□ -0.31
C4A-259ENST00000498271 HINT1P49773 126 aaPredicted RBP13.14□□□□□ -0.31
C4A-259ENST00000498271 HSD17B10Q99714 261 aaKnown RBP13.14□□□□□ -0.31
C4A-259ENST00000498271 RSG1Q9BU20 258 aa13.14□□□□□ -0.31
C4A-259ENST00000498271 MRPS18BQ9Y676 258 aaKnown RBP13.14□□□□□ -0.31
C4A-259ENST00000498271 H3BMH7 237 aa13.14□□□□□ -0.31
C4A-259ENST00000498271 RHBDD2Q6NTF9 364 aa13.14□□□□□ -0.31
C4A-259ENST00000498271 VSTM2AQ8TAG5 236 aa13.14□□□□□ -0.31
C4A-259ENST00000498271 MOB3AQ96BX8 217 aa13.14□□□□□ -0.31
C4A-259ENST00000498271 PRSS27Q9BQR3 290 aa13.14□□□□□ -0.31
C4A-259ENST00000498271 C21orf140B9A014 251 aa13.14□□□□□ -0.31
C4A-259ENST00000498271 DOLPP1Q86YN1 238 aa13.14□□□□□ -0.31
C4A-259ENST00000498271 TM4SF19Q96DZ7 209 aa13.14□□□□□ -0.31
C4A-259ENST00000498271 PMCHL2Q9BQD1 86 aa13.14□□□□□ -0.31
C4A-259ENST00000498271 PCGF1Q9BSM1 259 aa13.14□□□□□ -0.31
C4A-259ENST00000498271 SEBOXQ9HB31 216 aaPredicted RBP13.14□□□□□ -0.31
C4A-259ENST00000498271 OOEPA6NGQ2 149 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 SIGLEC5O15389 551 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 BGLAPP02818 100 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 PSMB2P49721 201 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 RNPS1Q15287 305 aaKnown RBP13.13□□□□□ -0.31
C4A-259ENST00000498271 C19orf48Q6RUI8 117 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 OR13G1Q8NGZ3 307 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 AQP3Q92482 292 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 PSME4Q14997 1843 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 ZNF236Q9UL36 1845 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 DNASE2O00115 360 aaPredicted RBP13.13□□□□□ -0.31
C4A-259ENST00000498271 FOXS1O43638 330 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 CD74P04233 296 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 COX6B1P14854 86 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 LOC102724200A0A096LPH7 203 aaPredicted RBP13.13□□□□□ -0.31
C4A-259ENST00000498271 TRBV5-7A0A0A0MS05 114 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 KHDC1LQ5JSQ8 128 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 SMRP1Q8NCR6 262 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 SF3B5Q9BWJ5 86 aaKnown RBP13.13□□□□□ -0.31
C4A-259ENST00000498271 CSN3P07498 182 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 FZD5Q13467 585 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 OR1L1Q8NH94 360 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 SARGQ9BW04 601 aa13.13□□□□□ -0.31
C4A-259ENST00000498271 SLC22A20A6NK97 555 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 IGHV4-34P06331 123 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 SSPNQ14714 243 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 PIPOXQ9P0Z9 390 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 SCN3AQ9NY46 2000 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 P2RY4P51582 365 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 CBLN4Q9NTU7 201 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 LIPT2A6NK58 231 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 ZNF785A8K8V0 405 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 MELTFP08582 738 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 PNLIPP16233 465 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 COL8A1P27658 744 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 RND3P61587 244 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 GABRA6Q16445 453 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 SLC25A34Q6PIV7 304 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 TEPPQ6URK8 271 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 WFDC8Q8IUA0 241 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 C5orf17Q8NAS9 161 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 DEFB108BQ8NET1 73 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 ZNF519Q8TB69 540 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 OR4C12Q96R67 309 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 SLC25A33Q9BSK2 321 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 BTF3P20290 206 aaKnown RBP13.12□□□□□ -0.31
C4A-259ENST00000498271 Q5BKY6 102 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 SCGB1D4Q6XE38 83 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 APCDD1LQ8NCL9 501 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 NPTNQ9Y639 398 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 C4orf51C9J302 202 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 H0Y980 276 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 H0YL77 283 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 IGKV1D-16P01601 117 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 HIKESHIQ53FT3 197 aa13.12□□□□□ -0.31
C4A-259ENST00000498271 TMEM238LA0A1B0GVL6 79 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 A6NJY4 79 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 RPS4XP62701 263 aaKnown RBP13.11□□□□□ -0.31
C4A-259ENST00000498271 WIPI1Q5MNZ9 446 aaPredicted RBP13.11□□□□□ -0.31
C4A-259ENST00000498271 TMEM222Q9H0R3 208 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 PILRAQ9UKJ1 303 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 PRNDQ9UKY0 176 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 LINC00587B1AMM8 73 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 RBP4P02753 201 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 ISG15P05161 165 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 HOXA5P20719 270 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 RPS11P62280 158 aaKnown RBP eCLIP13.11□□□□□ -0.313e-6■■■■■ 46.6
C4A-259ENST00000498271 ROM1Q03395 351 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 RP1L1Q8IWN7 2480 aaPredicted RBP13.11□□□□□ -0.31
C4A-259ENST00000498271 ARL6IP6Q8N6S5 226 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 IGHV3-64DA0A0J9YX35 117 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 KLK2P20151 261 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 CA6P23280 308 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 GAMTQ14353 236 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 LYG1Q8N1E2 194 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 MRGPRFQ96AM1 343 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 ZDHHC8Q9ULC8 765 aa13.11□□□□□ -0.31
C4A-259ENST00000498271 ASCC3Q8N3C0 2202 aaKnown RBP13.1□□□□□ -0.31
C4A-259ENST00000498271 A0A087WWC5 75 aa13.1□□□□□ -0.31
C4A-259ENST00000498271 A0A1B0GV72 72 aa13.1□□□□□ -0.31
C4A-259ENST00000498271 TNFRSF1AP19438 455 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms