RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 FAM189A2Q15884 450 aa9.06□□□□□ -0.96
ERCC8-208ENST00000497892 Q3ZCU0 254 aa9.06□□□□□ -0.96
ERCC8-208ENST00000497892 PLAC9Q5JTB6 97 aa9.06□□□□□ -0.96
ERCC8-208ENST00000497892 TPTE2P1Q5T6R2 138 aa9.06□□□□□ -0.96
ERCC8-208ENST00000497892 C12orf54Q6X4T0 127 aa9.06□□□□□ -0.96
ERCC8-208ENST00000497892 Q6ZPA2 131 aa9.06□□□□□ -0.96
ERCC8-208ENST00000497892 MOB1BQ7L9L4 216 aa9.06□□□□□ -0.96
ERCC8-208ENST00000497892 C8orf31Q8N9H6 132 aa9.06□□□□□ -0.96
ERCC8-208ENST00000497892 TAF15Q92804 592 aaKnown RBP eCLIP9.06□□□□□ -0.96
ERCC8-208ENST00000497892 ARHGAP5-AS1Q96IT6 56 aa9.06□□□□□ -0.96
ERCC8-208ENST00000497892 TAF9BQ9HBM6 251 aa9.06□□□□□ -0.96
ERCC8-208ENST00000497892 C12orf4Q9NQ89 552 aa9.06□□□□□ -0.96
ERCC8-208ENST00000497892 GFOD1Q9NXC2 390 aa9.06□□□□□ -0.96
ERCC8-208ENST00000497892 KCNIP1Q9NZI2 227 aa9.06□□□□□ -0.96
ERCC8-208ENST00000497892 AK3Q9UIJ7 227 aa9.06□□□□□ -0.96
ERCC8-208ENST00000497892 DAPK2Q9UIK4 370 aa9.06□□□□□ -0.96
ERCC8-208ENST00000497892 AMMECR1Q9Y4X0 333 aaPredicted RBP9.06□□□□□ -0.96
ERCC8-208ENST00000497892 TRBV6-6A0A0A6YYG2 114 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 OOSP1A8MZH6 123 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 CHST1O43916 411 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 AIREO43918 545 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 IGHV3-7P01780 117 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 MADCAM1Q13477 382 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 HMGN3Q15651 99 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 LY6EQ16553 131 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 MOGAT2Q3SYC2 334 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 DHRS7BQ6IAN0 325 aaPredicted RBP9.05□□□□□ -0.96
ERCC8-208ENST00000497892 ZNF880Q6PDB4 577 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 PRR18Q8N4B5 295 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 OR13F1Q8NGS4 319 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 OR4F5Q8NH21 305 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 OR1L1Q8NH94 360 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 RAB3CQ96E17 227 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 PECRQ9BY49 303 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 RIMS4Q9H426 269 aaPredicted RBP9.05□□□□□ -0.96
ERCC8-208ENST00000497892 ABCB10Q9NRK6 738 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 GNG12Q9UBI6 72 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 TCF19Q9Y242 345 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 MMP24Q9Y5R2 645 aa9.05□□□□□ -0.96
ERCC8-208ENST00000497892 IGHV3-43A0A0B4J1X8 118 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 METTL21EPA6NDL7 271 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 RAB27BO00194 218 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 MFNGO00587 321 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 CLEC2LP0C7M8 214 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 IGHV3-43DP0DP04 118 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 MDKP21741 143 aaPredicted RBP9.04□□□□□ -0.96
ERCC8-208ENST00000497892 RAB13P51153 203 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 ARHGDIBP52566 201 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 SCAND1P57086 179 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 HTD2P86397 168 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 OLFML2AQ68BL7 652 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 FAM53AQ6NSI3 398 aaPredicted RBP9.04□□□□□ -0.96
ERCC8-208ENST00000497892 CCDC144NLQ6NUI1 221 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 Q6ZTK2 550 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 LINC00311Q8N616 119 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 ZNF439Q8NDP4 499 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 OR10R2Q8NGX6 335 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 OR10X1Q8NGY0 326 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 LGALS14Q8TCE9 139 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 TOMM40LQ969M1 308 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 HDHD3Q9BSH5 251 aaPredicted RBP9.04□□□□□ -0.96
ERCC8-208ENST00000497892 FUNDC2Q9BWH2 189 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 CHMP1AQ9HD42 196 aaPredicted RBP9.04□□□□□ -0.96
ERCC8-208ENST00000497892 RAB18Q9NP72 206 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 JPT1Q9UK76 154 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 PITPNC1Q9UKF7 332 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 KCNK7Q9Y2U2 307 aa9.04□□□□□ -0.96
ERCC8-208ENST00000497892 A0A1B0GUS0 222 aa9.03□□□□□ -0.96
ERCC8-208ENST00000497892 A0A1W2PPE3 182 aa9.03□□□□□ -0.96
ERCC8-208ENST00000497892 A0A1W2PPI3 338 aa9.03□□□□□ -0.96
ERCC8-208ENST00000497892 A6NDX4 124 aa9.03□□□□□ -0.96
ERCC8-208ENST00000497892 TMEM127O75204 238 aa9.03□□□□□ -0.96
ERCC8-208ENST00000497892 HIST1H1DP16402 221 aaKnown RBP9.03□□□□□ -0.96
ERCC8-208ENST00000497892 BRS3P32247 399 aa9.03□□□□□ -0.96
ERCC8-208ENST00000497892 TGFBR1P36897 503 aa9.03□□□□□ -0.96
ERCC8-208ENST00000497892 MNDAP41218 407 aa9.03□□□□□ -0.96
ERCC8-208ENST00000497892 CCBE1Q6UXH8 406 aaPredicted RBP9.03□□□□□ -0.96
ERCC8-208ENST00000497892 Q6ZSV7 163 aa9.03□□□□□ -0.96
ERCC8-208ENST00000497892 SLC25A48Q6ZT89 311 aaKnown RBP9.03□□□□□ -0.96
ERCC8-208ENST00000497892 C3orf56Q8N813 242 aa9.03□□□□□ -0.96
ERCC8-208ENST00000497892 OR10V1Q8NGI7 309 aa9.03□□□□□ -0.96
ERCC8-208ENST00000497892 RPEQ96AT9 228 aa9.03□□□□□ -0.96
ERCC8-208ENST00000497892 GALMQ96C23 342 aa9.03□□□□□ -0.96
ERCC8-208ENST00000497892 CMSS1Q9BQ75 279 aaKnown RBP9.03□□□□□ -0.96
ERCC8-208ENST00000497892 MRPS26Q9BYN8 205 aaKnown RBP9.03□□□□□ -0.96
ERCC8-208ENST00000497892 ATG5Q9H1Y0 275 aa9.03□□□□□ -0.96
ERCC8-208ENST00000497892 RANBP3Q9H6Z4 567 aaPredicted RBP9.03□□□□□ -0.96
ERCC8-208ENST00000497892 OR2S2Q9NQN1 319 aa9.03□□□□□ -0.96
ERCC8-208ENST00000497892 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.03□□□□□ -0.96
ERCC8-208ENST00000497892 ABRACLQ9P1F3 81 aa9.03□□□□□ -0.96
ERCC8-208ENST00000497892 ETV7Q9Y603 341 aa9.03□□□□□ -0.96
ERCC8-208ENST00000497892 CLPSL1A2RUU4 121 aa9.02□□□□□ -0.97
ERCC8-208ENST00000497892 SERPINE3A8MV23 424 aa9.02□□□□□ -0.97
ERCC8-208ENST00000497892 HSD17B6O14756 317 aa9.02□□□□□ -0.97
ERCC8-208ENST00000497892 SLC31A2O15432 143 aa9.02□□□□□ -0.97
ERCC8-208ENST00000497892 TSPAN9O75954 239 aa9.02□□□□□ -0.97
ERCC8-208ENST00000497892 SCGNO76038 276 aa9.02□□□□□ -0.97
ERCC8-208ENST00000497892 RAB7AP51149 207 aa9.02□□□□□ -0.97
ERCC8-208ENST00000497892 ZNF137PP52743 207 aa9.02□□□□□ -0.97
ERCC8-208ENST00000497892 LSM3P62310 102 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms