RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ACTG1P63261 375 aa1.27□□□□□ -2.21
PSPC1-205ENST00000497722 GTF2BQ00403 316 aa1.27□□□□□ -2.21
PSPC1-205ENST00000497722 XRCC4Q13426 336 aa1.27□□□□□ -2.21
PSPC1-205ENST00000497722 OR4D1Q15615 310 aa1.27□□□□□ -2.21
PSPC1-205ENST00000497722 AADACL4Q5VUY2 407 aa1.27□□□□□ -2.21
PSPC1-205ENST00000497722 SDIM1Q6ZPB5 146 aa1.27□□□□□ -2.21
PSPC1-205ENST00000497722 SLC13A5Q86YT5 568 aaPredicted RBP1.27□□□□□ -2.21
PSPC1-205ENST00000497722 OR2Y1Q8NGV0 311 aa1.27□□□□□ -2.21
PSPC1-205ENST00000497722 OR4X1Q8NH49 305 aa1.27□□□□□ -2.21
PSPC1-205ENST00000497722 CD200R1Q8TD46 325 aa1.27□□□□□ -2.21
PSPC1-205ENST00000497722 SERPINB11Q96P15 392 aa1.27□□□□□ -2.21
PSPC1-205ENST00000497722 C11orf49Q9H6J7 331 aa1.27□□□□□ -2.21
PSPC1-205ENST00000497722 GLS2Q9UI32 602 aa1.27□□□□□ -2.21
PSPC1-205ENST00000497722 ZNF638Q14966 1978 aaKnown RBP1.27□□□□□ -2.21
PSPC1-205ENST00000497722 PTPRJQ12913 1337 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 MYO9BQ13459 2157 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 IGKV1-12A0A0C4DH73 117 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 C19orf71A6NCJ1 209 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 ZNF860A6NHJ4 632 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 SIGLEC16A6NMB1 481 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 ODF3BA8MYP8 253 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 C9J4A7 227 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 C8orf87E5RJ46 101 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 UBFD1O14562 309 aaKnown RBP1.26□□□□□ -2.21
PSPC1-205ENST00000497722 PHYHO14832 338 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 IGKV1D-12P01611 117 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 SYT1P21579 422 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 ATP6V0CP27449 155 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 LCN1P31025 176 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 PSMD7P51665 324 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 RAB8AP61006 207 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 USF2Q15853 346 aaPredicted RBP1.26□□□□□ -2.21
PSPC1-205ENST00000497722 PSG3Q16557 428 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 TMEM249Q2WGJ8 235 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 TRMT12Q53H54 448 aaKnown RBP1.26□□□□□ -2.21
PSPC1-205ENST00000497722 MTERF4Q7Z6M4 381 aaKnown RBP1.26□□□□□ -2.21
PSPC1-205ENST00000497722 SELENOHQ8IZQ5 122 aaKnown RBP1.26□□□□□ -2.21
PSPC1-205ENST00000497722 OR11H1Q8NG94 326 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 OR4X2Q8NGF9 303 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 C16orf78Q8WTQ4 265 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 ZNF75CPQ92670 426 aaPredicted RBP1.26□□□□□ -2.21
PSPC1-205ENST00000497722 CHST5Q9GZS9 411 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 GTSF1LQ9H1H1 148 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 SMDT1Q9H4I9 107 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 NDUFB11Q9NX14 153 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 MAT2BQ9NZL9 334 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 SNX12Q9UMY4 172 aa1.26□□□□□ -2.21
PSPC1-205ENST00000497722 BAHCC1Q9P281 2608 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 YLPM1P49750 1951 aaKnown RBP1.25□□□□□ -2.21
PSPC1-205ENST00000497722 LCTP09848 1927 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 IGHV3-73A0A0B4J1V6 119 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 A0A1B0GX12 115 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 LINC00862A6NCI5 91 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 ZNF879B4DU55 563 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 M0QYV0 167 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 SGCEO43556 437 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 SOD1P00441 154 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 GPX1P07203 203 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 ALOX5APP20292 161 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 ADORA1P30542 326 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 GABRA4P48169 554 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 ETV1P50549 477 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 C1DQ13901 141 aaKnown RBP1.25□□□□□ -2.21
PSPC1-205ENST00000497722 PDGFRLQ15198 375 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 SYCP1Q15431 976 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 KRTAP13-4Q3LI77 160 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 RASL11AQ6T310 242 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 ZFAND2AQ8N6M9 145 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 NATD1Q8N6N6 113 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 CCDC112Q8NEF3 446 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 SMIM12Q96EX1 92 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 ABHD14BQ96IU4 210 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 TMEM56Q96MV1 263 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 GPR22Q99680 433 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 ZNF251Q9BRH9 671 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 CDCA4Q9BXL8 241 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 PSORS1C2Q9UIG4 136 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 LINC00527Q9UJ94 153 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 SNX10Q9Y5X0 201 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 PUS1Q9Y606 427 aaKnown RBP eCLIP1.25□□□□□ -2.21
PSPC1-205ENST00000497722 ARAP3Q8WWN8 1544 aa1.25□□□□□ -2.21
PSPC1-205ENST00000497722 COL5A3P25940 1745 aaPredicted RBP1.24□□□□□ -2.21
PSPC1-205ENST00000497722 MAP3K19Q56UN5 1328 aa1.24□□□□□ -2.21
PSPC1-205ENST00000497722 DHRS12A0PJE2 317 aa1.24□□□□□ -2.21
PSPC1-205ENST00000497722 IGKV2-29A2NJV5 120 aaPredicted RBP1.24□□□□□ -2.21
PSPC1-205ENST00000497722 GRIFINA4D1Z8 144 aa1.24□□□□□ -2.21
PSPC1-205ENST00000497722 UBE2L6O14933 153 aa1.24□□□□□ -2.21
PSPC1-205ENST00000497722 UGT2B11O75310 529 aa1.24□□□□□ -2.21
PSPC1-205ENST00000497722 LY6HO94772 140 aa1.24□□□□□ -2.21
PSPC1-205ENST00000497722 S1PR2O95136 353 aa1.24□□□□□ -2.21
PSPC1-205ENST00000497722 EPPINO95925 133 aa1.24□□□□□ -2.21
PSPC1-205ENST00000497722 LIMS3P0CW19 117 aa1.24□□□□□ -2.21
PSPC1-205ENST00000497722 LIMS4P0CW20 117 aa1.24□□□□□ -2.21
PSPC1-205ENST00000497722 F8A1P23610 371 aa1.24□□□□□ -2.21
PSPC1-205ENST00000497722 PSMB3P49720 205 aa1.24□□□□□ -2.21
PSPC1-205ENST00000497722 EXOC3L4Q17RC7 722 aa1.24□□□□□ -2.21
PSPC1-205ENST00000497722 FAM229BQ4G0N7 80 aa1.24□□□□□ -2.21
PSPC1-205ENST00000497722 MRPL51Q4U2R6 128 aaKnown RBP1.24□□□□□ -2.21
PSPC1-205ENST00000497722 HES3Q5TGS1 186 aa1.24□□□□□ -2.21
PSPC1-205ENST00000497722 DCANP1Q8TF63 244 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms