RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 FAM90A18PA6NE21 464 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 FAM90A16PA6NEW6 464 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 FAM90A20PA6NIJ5 464 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 FAM90A8PA6NJQ4 464 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 FAM90A7PA6NKC0 464 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 FAM90A22PA8MWA6 464 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 FAM90A12PA8MX19 464 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 FAM90A5PA8MXJ8 464 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 FAM90A23PA8MXZ1 464 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 K7EPK0 472 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 IGHV3-9P01782 118 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 FAM90A15PP0C7V4 464 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 FAM90A13PP0C7W8 464 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 FAM90A14PP0C7W9 464 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 FAM90A24PP0C7X0 464 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 TAS2R46P59540 309 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 UBE2G2P60604 165 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 MIDNQ504T8 468 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 FAM71E2Q8N5Q1 922 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 BORCS8Q96FH0 119 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 PRSS50Q9UI38 385 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 TMED3Q9Y3Q3 217 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 MYO7BQ6PIF6 2116 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 A0A1W2PPE2 198 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 FIGNL2A6NMB9 653 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 TSPAN15O95858 294 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 HLA-HP01893 362 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 CRYGCP07315 174 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 LYL1P12980 280 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 TUBG1P23258 451 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 FPR2P25090 351 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 PTGER4P35408 488 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 NDUFA6P56556 154 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 SCGB2A2Q13296 93 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 AKR1C8PQ5T2L2 129 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 LHFPL1Q86WI0 220 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 VPS25Q9BRG1 176 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 TUBG2Q9NRH3 451 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 NAGKQ9UJ70 344 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 IFNA21P01568 189 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 BRS3P32247 399 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 EIF5AP63241 154 aaKnown RBP9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 PLP2Q04941 152 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 MALLQ13021 153 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 IL15RAQ13261 267 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 SP6Q3SY56 376 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 TMEM268Q5VZI3 342 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 EIF5AL1Q6IS14 154 aaKnown RBP9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 ELL3Q9HB65 397 aaPredicted RBP9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 ZNF701Q9NV72 531 aaPredicted RBP9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 SMPXQ9UHP9 88 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 SERPINA2P20848 420 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 BLVRBP30043 206 aaPredicted RBP9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 MC5RP33032 325 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 ASCL1P50553 236 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 RAB1AP62820 205 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 S100A7AQ86SG5 101 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 C1orf162Q8NEQ5 155 aaPredicted RBP9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 MRPL24Q96A35 216 aaKnown RBP9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 SARAFQ96BY9 339 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 HDHD3Q9BSH5 251 aaPredicted RBP9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 ALKBH7Q9BT30 221 aaPredicted RBP9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 LRFN3Q9BTN0 628 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 CNTNAP3Q9BZ76 1288 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 OSGIN2Q9Y236 505 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 RFNGQ9Y644 331 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 A0A096LPE4 126 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 A0A1W2PPZ6 126 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 PPP1R2P9O14990 202 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 CCL25O15444 150 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 OR13C7P0DN81 318 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 TMEM225BP0DP42 221 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 GZMBP10144 247 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 GZMHP20718 246 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 CHATP28329 748 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 PMP22Q01453 160 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 LYG1Q8N1E2 194 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 EMG1Q92979 244 aaKnown RBP9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 SMIM12Q96EX1 92 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 PARP11Q9NR21 331 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 SLC35D1Q9NTN3 355 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 SSUH2Q9Y2M2 353 aa9.88□□□□□ -0.83
SNRNP200-208ENST00000497539 FRYLO94915 3013 aa9.87□□□□□ -0.83
SNRNP200-208ENST00000497539 IGKV1-12A0A0C4DH73 117 aa9.87□□□□□ -0.83
SNRNP200-208ENST00000497539 IGKV1D-12P01611 117 aa9.87□□□□□ -0.83
SNRNP200-208ENST00000497539 COX5AP20674 150 aa9.87□□□□□ -0.83
SNRNP200-208ENST00000497539 ECI1P42126 302 aa9.87□□□□□ -0.83
SNRNP200-208ENST00000497539 GUK1Q16774 197 aa9.87□□□□□ -0.83
SNRNP200-208ENST00000497539 CEACAM21Q3KPI0 293 aa9.87□□□□□ -0.83
SNRNP200-208ENST00000497539 PLCXD3Q63HM9 321 aa9.87□□□□□ -0.83
SNRNP200-208ENST00000497539 FAM214BQ7L5A3 538 aa9.87□□□□□ -0.83
SNRNP200-208ENST00000497539 SCGB3A2Q96PL1 93 aa9.87□□□□□ -0.83
SNRNP200-208ENST00000497539 AHCTF1Q8WYP5 2266 aa9.87□□□□□ -0.83
SNRNP200-208ENST00000497539 FAM230AA0A1W2PPH8 454 aa9.87□□□□□ -0.83
SNRNP200-208ENST00000497539 C5orf49A4QMS7 147 aa9.87□□□□□ -0.83
SNRNP200-208ENST00000497539 PET100P0DJ07 73 aa9.87□□□□□ -0.83
SNRNP200-208ENST00000497539 RBMXP38159 391 aaKnown RBP9.87□□□□□ -0.83
SNRNP200-208ENST00000497539 RPL19P84098 196 aaKnown RBP9.87□□□□□ -0.83
SNRNP200-208ENST00000497539 DEFB109BQ30KR1 87 aa9.87□□□□□ -0.83
SNRNP200-208ENST00000497539 OR52M1Q8NGK5 317 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms