RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 MOB3BQ86TA1 216 aa12.48□□□□□ -0.41
HDAC4-213ENST00000496347 PRR18Q8N4B5 295 aa12.48□□□□□ -0.41
HDAC4-213ENST00000496347 OR1L1Q8NH94 360 aa12.48□□□□□ -0.41
HDAC4-213ENST00000496347 MRPL30Q8TCC3 161 aaKnown RBP12.48□□□□□ -0.41
HDAC4-213ENST00000496347 NEDD4LQ96PU5 975 aa12.48□□□□□ -0.41
HDAC4-213ENST00000496347 TM2D1Q9BX74 207 aa12.48□□□□□ -0.41
HDAC4-213ENST00000496347 TAF9BQ9HBM6 251 aa12.48□□□□□ -0.41
HDAC4-213ENST00000496347 JPT1Q9UK76 154 aa12.48□□□□□ -0.41
HDAC4-213ENST00000496347 TCRBV4S1A1TA0A5B7 111 aa12.47□□□□□ -0.41
HDAC4-213ENST00000496347 UBE2QL1A1L167 161 aa12.47□□□□□ -0.41
HDAC4-213ENST00000496347 SH2D7A6NKC9 451 aaPredicted RBP12.47□□□□□ -0.41
HDAC4-213ENST00000496347 G3V4G9 280 aa12.47□□□□□ -0.41
HDAC4-213ENST00000496347 CPEP16870 476 aa12.47□□□□□ -0.41
HDAC4-213ENST00000496347 CD1BP29016 333 aa12.47□□□□□ -0.41
HDAC4-213ENST00000496347 VHLP40337 213 aa12.47□□□□□ -0.41
HDAC4-213ENST00000496347 UNC119Q13432 240 aa12.47□□□□□ -0.41
HDAC4-213ENST00000496347 TBCEQ15813 527 aaPredicted RBP12.47□□□□□ -0.41
HDAC4-213ENST00000496347 MOB1BQ7L9L4 216 aa12.47□□□□□ -0.41
HDAC4-213ENST00000496347 TGIF2LXQ8IUE1 241 aa12.47□□□□□ -0.41
HDAC4-213ENST00000496347 Q8N6K4 173 aa12.47□□□□□ -0.41
HDAC4-213ENST00000496347 OR8H1Q8NGG4 311 aa12.47□□□□□ -0.41
HDAC4-213ENST00000496347 OR10V1Q8NGI7 309 aa12.47□□□□□ -0.41
HDAC4-213ENST00000496347 OR2T10Q8NGZ9 312 aa12.47□□□□□ -0.41
HDAC4-213ENST00000496347 CHPT1Q8WUD6 406 aa12.47□□□□□ -0.41
HDAC4-213ENST00000496347 OR2S2Q9NQN1 319 aa12.47□□□□□ -0.41
HDAC4-213ENST00000496347 A0A1W2PRX2 142 aa12.46□□□□□ -0.41
HDAC4-213ENST00000496347 PSMB11A5LHX3 300 aa12.46□□□□□ -0.41
HDAC4-213ENST00000496347 TMEM14DPA8MWL7 114 aa12.46□□□□□ -0.41
HDAC4-213ENST00000496347 SLC31A2O15432 143 aa12.46□□□□□ -0.41
HDAC4-213ENST00000496347 LANCL1O43813 399 aa12.46□□□□□ -0.41
HDAC4-213ENST00000496347 RANBP1P43487 201 aa12.46□□□□□ -0.41
HDAC4-213ENST00000496347 RPS25P62851 125 aaKnown RBP12.46□□□□□ -0.41
HDAC4-213ENST00000496347 HTD2P86397 168 aa12.46□□□□□ -0.41
HDAC4-213ENST00000496347 HNF4GQ14541 408 aa12.46□□□□□ -0.41
HDAC4-213ENST00000496347 KHDC1LQ5JSQ8 128 aa12.46□□□□□ -0.41
HDAC4-213ENST00000496347 OR2W3Q7Z3T1 314 aa12.46□□□□□ -0.41
HDAC4-213ENST00000496347 FOXRED2Q8IWF2 684 aa12.46□□□□□ -0.41
HDAC4-213ENST00000496347 TMEM203Q969S6 136 aa12.46□□□□□ -0.41
HDAC4-213ENST00000496347 EAF1Q96JC9 268 aaPredicted RBP12.46□□□□□ -0.41
HDAC4-213ENST00000496347 SULT4A1Q9BR01 284 aa12.46□□□□□ -0.41
HDAC4-213ENST00000496347 ABHD14AQ9BUJ0 271 aa12.46□□□□□ -0.41
HDAC4-213ENST00000496347 CCDC90BQ9GZT6 254 aa12.46□□□□□ -0.41
HDAC4-213ENST00000496347 LIN7CQ9NUP9 197 aaKnown RBP12.46□□□□□ -0.41
HDAC4-213ENST00000496347 LRRC42Q9Y546 428 aa12.46□□□□□ -0.41
HDAC4-213ENST00000496347 DNAH3Q8TD57 4116 aa12.46□□□□□ -0.42
HDAC4-213ENST00000496347 ERICH4A6NGS2 130 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 SLC17A2O00624 439 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 RGS11O94810 467 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 MOSP00540 346 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 IGHG2P01859 326 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 QRFPP83859 136 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 HMGN3Q15651 99 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 CT45A1Q5HYN5 189 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 LY6G6FQ5SQ64 297 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 OR10K2Q6IF99 312 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 FAM53AQ6NSI3 398 aaPredicted RBP12.45□□□□□ -0.42
HDAC4-213ENST00000496347 TMEM91Q6ZNR0 172 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 ZNF367Q7RTV3 350 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 REC114Q7Z4M0 266 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 SLC35E3Q7Z769 313 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 SVOPQ8N4V2 548 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 COMMD1Q8N668 190 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 CT45A3Q8NHU0 189 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 GALMQ96C23 342 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 URM1Q9BTM9 101 aaKnown RBP12.45□□□□□ -0.42
HDAC4-213ENST00000496347 PLGRKTQ9HBL7 147 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 ACOT13Q9NPJ3 140 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 ABRACLQ9P1F3 81 aa12.45□□□□□ -0.42
HDAC4-213ENST00000496347 IGHV3-72A0A0B4J1Y9 119 aa12.44□□□□□ -0.42
HDAC4-213ENST00000496347 SERPINE3A8MV23 424 aa12.44□□□□□ -0.42
HDAC4-213ENST00000496347 NAPSAO96009 420 aa12.44□□□□□ -0.42
HDAC4-213ENST00000496347 PF4P02776 101 aa12.44□□□□□ -0.42
HDAC4-213ENST00000496347 ARSBP15848 533 aa12.44□□□□□ -0.42
HDAC4-213ENST00000496347 SLC6A1P30531 599 aa12.44□□□□□ -0.42
HDAC4-213ENST00000496347 ZNF134P52741 427 aa12.44□□□□□ -0.42
HDAC4-213ENST00000496347 SLC35B1P78383 322 aa12.44□□□□□ -0.42
HDAC4-213ENST00000496347 GNMTQ14749 295 aa12.44□□□□□ -0.42
HDAC4-213ENST00000496347 RAB11BQ15907 218 aa12.44□□□□□ -0.42
HDAC4-213ENST00000496347 MORN2Q502X0 79 aa12.44□□□□□ -0.42
HDAC4-213ENST00000496347 C6orf201Q7Z4U5 140 aa12.44□□□□□ -0.42
HDAC4-213ENST00000496347 CNBD2Q96M20 576 aa12.44□□□□□ -0.42
HDAC4-213ENST00000496347 MGLLQ99685 303 aa12.44□□□□□ -0.42
HDAC4-213ENST00000496347 NICN1Q9BSH3 213 aa12.44□□□□□ -0.42
HDAC4-213ENST00000496347 RIMS4Q9H426 269 aaPredicted RBP12.44□□□□□ -0.42
HDAC4-213ENST00000496347 KCNK15Q9H427 330 aa12.44□□□□□ -0.42
HDAC4-213ENST00000496347 NCBP2LA6PVI3 153 aaKnown RBP12.43□□□□□ -0.42
HDAC4-213ENST00000496347 AP4M1O00189 453 aa12.43□□□□□ -0.42
HDAC4-213ENST00000496347 YPEL1O60688 119 aa12.43□□□□□ -0.42
HDAC4-213ENST00000496347 CD33P20138 364 aa12.43□□□□□ -0.42
HDAC4-213ENST00000496347 CALRP27797 417 aaKnown RBP12.43□□□□□ -0.42
HDAC4-213ENST00000496347 PPP1CCP36873 323 aaKnown RBP12.43□□□□□ -0.42
HDAC4-213ENST00000496347 GPR12P47775 334 aa12.43□□□□□ -0.42
HDAC4-213ENST00000496347 LSAMPQ13449 338 aa12.43□□□□□ -0.42
HDAC4-213ENST00000496347 FAM71F2Q6NXP2 309 aa12.43□□□□□ -0.42
HDAC4-213ENST00000496347 C10orf99Q6UWK7 81 aa12.43□□□□□ -0.42
HDAC4-213ENST00000496347 FAM71E2Q8N5Q1 922 aa12.43□□□□□ -0.42
HDAC4-213ENST00000496347 Q8N9W7 124 aa12.43□□□□□ -0.42
HDAC4-213ENST00000496347 OR2AK2Q8NG84 335 aa12.43□□□□□ -0.42
HDAC4-213ENST00000496347 YPEL2Q96QA6 119 aa12.43□□□□□ -0.42
HDAC4-213ENST00000496347 GFI1Q99684 422 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms