RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 MCRIP1C9JLW8 97 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 LY6LH3BQJ8 138 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 AIREO43918 545 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 CRTAPO75718 401 aaPredicted RBP5.45□□□□□ -1.54
VPS52-219ENST00000493379 GABARAPO95166 117 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 TSPAN15O95858 294 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 RPS19P39019 145 aaKnown RBP5.45□□□□□ -1.54
VPS52-219ENST00000493379 RPL5P46777 297 aaKnown RBP5.45□□□□□ -1.54
VPS52-219ENST00000493379 DYNLT3P51808 116 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 SLURP1P55000 103 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 EDDM3BP56851 147 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 LOXL3P58215 753 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 SCN1BQ07699 218 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 TMEM30BQ3MIR4 351 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 PLAC9Q5JTB6 97 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 VAX1Q5SQQ9 334 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 MINOS1Q5TGZ0 78 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 OR10K2Q6IF99 312 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 RAB12Q6IQ22 244 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 SFXN4Q6P4A7 337 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 LDLRAD3Q86YD5 345 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 FAM185AQ8N0U4 392 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 LINC00311Q8N616 119 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 TPRX1Q8N7U7 411 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 ZDHHC22Q8N966 263 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 BEND2Q8NDZ0 799 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 OR13A1Q8NGR1 328 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 ZNF418Q8TF45 676 aaPredicted RBP5.45□□□□□ -1.54
VPS52-219ENST00000493379 DYRK2Q92630 601 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 LHX4Q969G2 390 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 MALSU1Q96EH3 234 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 CMTM3Q96MX0 182 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 BCL7BQ9BQE9 202 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 CHCHD6Q9BRQ6 235 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 URM1Q9BTM9 101 aaKnown RBP5.45□□□□□ -1.54
VPS52-219ENST00000493379 SUCNR1Q9BXA5 334 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 MS4A7Q9GZW8 240 aaPredicted RBP5.45□□□□□ -1.54
VPS52-219ENST00000493379 TOLLIPQ9H0E2 274 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 ABCG5Q9H222 651 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 TMEM133Q9H2Q1 129 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 GAL3ST2Q9H3Q3 398 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 RNF167Q9H6Y7 350 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 PLGRKTQ9HBL7 147 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 KIF25Q9UIL4 384 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 SPATA2Q9UM82 520 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 SLC45A2Q9UMX9 530 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 TBL2Q9Y4P3 447 aaKnown RBP5.45□□□□□ -1.54
VPS52-219ENST00000493379 PEX16Q9Y5Y5 336 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 POMT1Q9Y6A1 747 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 SESN1Q9Y6P5 492 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 MINOS1-NBL1R4GNA1 71 aa5.45□□□□□ -1.54
VPS52-219ENST00000493379 MEIKINA0A087WXM9 373 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 A0A0A6YYH2 397 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 TMEM30CPA0ZSE6 113 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 TMEM89A2RUT3 159 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 A6NJ64 397 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 NPFFO15130 113 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 SOCS1O15524 211 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 CLPXO76031 633 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 DIRAS3O95661 229 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 MELTFP08582 738 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 BLVRBP30043 206 aaPredicted RBP5.44□□□□□ -1.54
VPS52-219ENST00000493379 IER3P46695 156 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 EFNB2P52799 333 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 SNU13P55769 128 aaKnown RBP5.44□□□□□ -1.54
VPS52-219ENST00000493379 CLDN12P56749 244 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 RAP2BP61225 183 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 RPL15P61313 204 aaKnown RBP5.44□□□□□ -1.54
VPS52-219ENST00000493379 HTD2P86397 168 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 PLA2G7Q13093 441 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 ARL6IP1Q15041 203 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 P2RY14Q15391 338 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 DEFB112Q30KQ8 113 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 LDLRAD2Q5SZI1 272 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 ATAD3CQ5T2N8 411 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 TRAT1Q6PIZ9 186 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 CCBE1Q6UXH8 406 aaPredicted RBP5.44□□□□□ -1.54
VPS52-219ENST00000493379 Q6ZPA2 131 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 Q6ZS49 121 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 Q6ZTK2 550 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 OR56B1Q8NGI3 324 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 OR13D1Q8NGV5 346 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 OR10R2Q8NGX6 335 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 MRPL30Q8TCC3 161 aaKnown RBP5.44□□□□□ -1.54
VPS52-219ENST00000493379 PIFOQ8TCI5 191 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 FAM216AQ8WUB2 273 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 FAM46BQ96A09 425 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 SLC25A46Q96AG3 418 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 NEDD4LQ96PU5 975 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 SULT4A1Q9BR01 284 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 NICN1Q9BSH3 213 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 FAAP24Q9BTP7 215 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 ESM1Q9NQ30 184 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 SIRT7Q9NRC8 400 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 CALYQ9NYX4 217 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 ABRACLQ9P1F3 81 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 ONECUT1Q9UBC0 465 aa5.44□□□□□ -1.54
VPS52-219ENST00000493379 IGHV2-26A0A0B4J1V2 119 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 METTL21EPA6NDL7 271 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 FAM90A9PA6NNJ1 464 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms