RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 PRO1933Q9H354 126 aa12.97□□□□□ -0.33
TNFRSF1B-203ENST00000492361 DLL3Q9NYJ7 618 aa12.97□□□□□ -0.33
TNFRSF1B-203ENST00000492361 DCHS1Q96JQ0 3298 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 IGKV1-6A0A0C4DH72 117 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 RAC2P15153 192 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 EDDM3BP56851 147 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 FGF12P61328 243 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 ZNF573Q86YE8 665 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 ABHD14BQ96IU4 210 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 FGF23Q9GZV9 251 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 IFT22Q9H7X7 185 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 ZFHX4Q86UP3 3567 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 FOXI3A8MTJ6 420 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 TRGC2P03986 189 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 F2RP25116 425 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 OR8G1Q15617 311 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 CEACAM21Q3KPI0 293 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 Q6ZRM9 215 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 OR52L2PQ8NGH6 319 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 GALNT14Q96FL9 552 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 PFDN5Q99471 154 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 OR2D2Q9H210 308 aa12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 STRAPQ9Y3F4 350 aaKnown RBP12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 INTS1Q8N201 2190 aaKnown RBP12.96□□□□□ -0.33
TNFRSF1B-203ENST00000492361 TIMM8AO60220 97 aaPredicted RBP12.96□□□□□ -0.34
TNFRSF1B-203ENST00000492361 SRPXP78539 464 aa12.96□□□□□ -0.34
TNFRSF1B-203ENST00000492361 SRSF6Q13247 344 aaKnown RBP12.96□□□□□ -0.34
TNFRSF1B-203ENST00000492361 LRP11Q86VZ4 500 aa12.96□□□□□ -0.34
TNFRSF1B-203ENST00000492361 C15orf54Q8N8G6 183 aa12.96□□□□□ -0.34
TNFRSF1B-203ENST00000492361 OPA3Q9H6K4 179 aa12.96□□□□□ -0.34
TNFRSF1B-203ENST00000492361 RPRMQ9NS64 109 aa12.96□□□□□ -0.34
TNFRSF1B-203ENST00000492361 CFAP47Q6ZTR5 3102 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 CEP192Q8TEP8 1941 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 RRP8O43159 456 aaKnown RBP12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 CYTIPO60759 359 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 OPN1MWP04001 364 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 OPN1MW2P0DN77 364 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 OPN1MW3P0DN78 364 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 OR1L1Q8NH94 360 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 C10orf35Q96D05 121 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 CEACAM18A8MTB9 384 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 NEURL1O76050 574 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 ZFP36L1Q07352 338 aaKnown RBP12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 GFI1BQ5VTD9 330 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 WFIKKN1Q96NZ8 548 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 C9orf172C9J069 976 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 HEXAP06865 529 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 MMP7P09237 267 aaPredicted RBP12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 FABP4P15090 132 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 PMELP40967 661 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 ZNF709Q8N972 641 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 GNG12Q9UBI6 72 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 OR2W1Q9Y3N9 320 aa12.95□□□□□ -0.34
TNFRSF1B-203ENST00000492361 ARPC4-TTLL3A0A0A6YYG9 625 aa12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 RPS23P62266 143 aaKnown RBP12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 REPIN1Q9BWE0 567 aaKnown RBP12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 ANAPC10Q9UM13 185 aa12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 LNP1A1A4G5 178 aa12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 OR5H1A6NKK0 313 aa12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 ZNF705GA8MUZ8 300 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 SYNGR2O43760 224 aa12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 OR2H2O95918 312 aa12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 CD200P41217 278 aa12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 HMGN3Q15651 99 aa12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 SLC25A40Q8TBP6 338 aa12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 SNX22Q96L94 193 aa12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 TAAR9Q96RI9 348 aa12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 WISP2O76076 250 aa12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 CDS2O95674 445 aa12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 SNRPCP09234 159 aaKnown RBP12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 CD46P15529 392 aa12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 LILRB1Q8NHL6 650 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 GINS3Q9BRX5 216 aa12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 PSG11Q9UQ72 335 aa12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 ATP23Q9Y6H3 246 aa12.94□□□□□ -0.34
TNFRSF1B-203ENST00000492361 TNCP24821 2201 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 TRAV24A0A0B4J272 114 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 CRYAAP02489 173 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 MRPL49Q13405 166 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 OR8B8Q15620 311 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 TBC1D28Q2M2D7 210 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 VKORC1L1Q8N0U8 176 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 OR4F5Q8NH21 305 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 PLPPR1Q8TBJ4 325 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 LEAP2Q969E1 77 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 OR4F4Q96R69 305 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 WASF3Q9UPY6 502 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 CPAMD8Q8IZJ3 1885 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 TRGV5A0A0B4J1U4 118 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 A0A1W2PPQ1 181 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 WNT5AP41221 380 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 HIST1H3AP68431 136 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 FOXO1Q12778 655 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 EIF3IQ13347 325 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 OR4D5Q8NGN0 318 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 FRZBQ92765 325 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 GNPNAT1Q96EK6 184 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 SMIM7Q9BQ49 75 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 CABLES2Q9BTV7 478 aa12.93□□□□□ -0.34
TNFRSF1B-203ENST00000492361 ZNF703Q9H7S9 590 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms