RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 Q8N9W7 124 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 OR52L2PQ8NGH6 319 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 CST11Q9H112 138 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 DCLRE1BQ9H816 532 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 RAB9BQ9NP90 201 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 PLSCR3Q9NRY6 295 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 SCN3BQ9NY72 215 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 KCNIP1Q9NZI2 227 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 GHRLQ9UBU3 117 aa9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 LSM2Q9Y333 95 aaKnown RBP9.42□□□□□ -0.9
CCHCR1-215ENST00000488920 VSIG8P0DPA2 414 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 SRMP19623 302 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 GPR12P47775 334 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 F2RL1P55085 397 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 AQP4P55087 323 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 RPL23AP62750 156 aaKnown RBP9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 SLC35A2P78381 396 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 SLC35B1P78383 322 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 GNMTQ14749 295 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 MED22Q15528 200 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 TMEM30BQ3MIR4 351 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 Q3ZCU0 254 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 MORN2Q502X0 79 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 RBM48Q5RL73 367 aaKnown RBP9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 GLT8D1Q68CQ7 371 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 OR2W3Q7Z3T1 314 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 STPG2Q8N412 459 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 MRPL30Q8TCC3 161 aaKnown RBP9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 NRG4Q8WWG1 115 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 PHYHIPQ92561 330 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 TMEM203Q969S6 136 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 NEDD4LQ96PU5 975 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 S1PR3Q99500 378 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 SULT4A1Q9BR01 284 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 FAAP24Q9BTP7 215 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 ABCG5Q9H222 651 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 KCNK15Q9H427 330 aa9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 MBNL3Q9NUK0 354 aaKnown RBP9.41□□□□□ -0.9
CCHCR1-215ENST00000488920 NUDT19A8MXV4 375 aa9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 UBBP0CG47 229 aa9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 CHATP28329 748 aa9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 HTR2CP28335 458 aa9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 PPP1CCP36873 323 aaKnown RBP9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 ZNF137PP52743 207 aa9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 IRF3Q14653 427 aa9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 HSD17B12Q53GQ0 312 aa9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 C1orf100Q5SVJ3 147 aa9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 LIPKQ5VXJ0 399 aa9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 STEAP3Q658P3 488 aa9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 ETV3LQ6ZN32 361 aa9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 C8orf86Q6ZUL3 223 aa9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 C6orf201Q7Z4U5 140 aa9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 MRPL41Q8IXM3 137 aaKnown RBP9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 LINC00482Q8N8I6 264 aa9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 OR51D1Q8NGF3 324 aa9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 RCC1LQ96I51 464 aaKnown RBP9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 RASL11BQ9BPW5 248 aa9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 ZFP57Q9NU63 452 aa9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 LIN7CQ9NUP9 197 aaKnown RBP9.4□□□□□ -0.9
CCHCR1-215ENST00000488920 AP4M1O00189 453 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 TXNL1O43396 289 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 LANCL1O43813 399 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 UCHL1P09936 223 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 HSMCR30P0CW71 290 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 THBS3P49746 956 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 KRTAP10-11P60412 298 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 RPS27AP62979 156 aaKnown RBP9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 LCNL1Q6ZST4 164 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 COMMD1Q8N668 190 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 KLHL30-AS1Q8NEE0 82 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 KCNG3Q8TAE7 436 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 UFD1Q92890 307 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 GALMQ96C23 342 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 DUX3Q96PT4 197 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 HSPB9Q9BQS6 159 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 NICN1Q9BSH3 213 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 ABHD14AQ9BUJ0 271 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 TMEM59Q9BXS4 323 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 TPRKBQ9Y3C4 175 aa9.39□□□□□ -0.91
CCHCR1-215ENST00000488920 DNAH3Q8TD57 4116 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 SLC22A1O15245 554 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 RPLP1P05386 114 aaKnown RBP9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 CD37P11049 281 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 BLVRBP30043 206 aaPredicted RBP9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 HOXD3P31249 432 aaPredicted RBP9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 OR3A3P47888 321 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 RPS25P62851 125 aaKnown RBP9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 QRFPP83859 136 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 HTD2P86397 168 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 UNC119Q13432 240 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 LSAMPQ13449 338 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 P2RY14Q15391 338 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 PNLIPRP3Q17RR3 467 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 TEX38Q6PEX7 206 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 TMEM91Q6ZNR0 172 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 ZNF554Q86TJ5 538 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 ZNF695Q8IW36 515 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 ODF3L1Q8IXM7 274 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 FAM71E2Q8N5Q1 922 aa9.38□□□□□ -0.91
CCHCR1-215ENST00000488920 OR8H1Q8NGG4 311 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms