RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 V9GY05 133 aa11.34□□□□□ -0.59
COL9A2-208ENST00000488463 TET2Q6N021 2002 aaPredicted RBP11.34□□□□□ -0.59
COL9A2-208ENST00000488463 TMEM272A0A1B0GTI8 110 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 TRIM64CA6NLI5 447 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 SPINT2O43291 252 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 OR2F2O95006 317 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 BLVRBP30043 206 aaPredicted RBP11.33□□□□□ -0.6
COL9A2-208ENST00000488463 ZNF137PP52743 207 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 C2orf76Q3KRA6 126 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 TMEM30BQ3MIR4 351 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 CT45A1Q5HYN5 189 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 HIST2H2BDQ6DRA6 164 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 TRAT1Q6PIZ9 186 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 C16orf82Q7Z2V1 217 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 GPR141Q7Z602 305 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 DRAM1Q8N682 238 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 CT45A3Q8NHU0 189 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 TOMM40LQ969M1 308 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 RPEQ96AT9 228 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 NEDD4LQ96PU5 975 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 SLC25A33Q9BSK2 321 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 PRSS22Q9GZN4 317 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 STEAP1Q9UHE8 339 aa11.33□□□□□ -0.6
COL9A2-208ENST00000488463 TRBV6-6A0A0A6YYG2 114 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 IFITM5A6NNB3 132 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 NOL3O60936 208 aaKnown RBP11.32□□□□□ -0.6
COL9A2-208ENST00000488463 FGF9P31371 208 aaPredicted RBP11.32□□□□□ -0.6
COL9A2-208ENST00000488463 MNDAP41218 407 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 RAB7AP51149 207 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 PSMD7P51665 324 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 HTD2P86397 168 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 EBI3Q14213 229 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 GNMTQ14749 295 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 HERPUD1Q15011 391 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 HMGN3Q15651 99 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 TMEM95Q3KNT9 176 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 TIMM50Q3ZCQ8 353 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 PLAC9Q5JTB6 97 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 HES5Q5TA89 166 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 C22orf42Q6IC83 251 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 TREML4Q6UXN2 200 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 OR8H3Q8N146 312 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 OR10V1Q8NGI7 309 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 OR10X1Q8NGY0 326 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 OR56B4Q8NH76 319 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 TXNL4BQ9NX01 149 aaKnown RBP11.32□□□□□ -0.6
COL9A2-208ENST00000488463 HSF4Q9ULV5 492 aa11.32□□□□□ -0.6
COL9A2-208ENST00000488463 IGHV1-3A0A0C4DH29 117 aa11.31□□□□□ -0.6
COL9A2-208ENST00000488463 HSD17B6O14756 317 aa11.31□□□□□ -0.6
COL9A2-208ENST00000488463 KCNAB3O43448 404 aa11.31□□□□□ -0.6
COL9A2-208ENST00000488463 SNRNP70P08621 437 aaKnown RBP11.31□□□□□ -0.6
COL9A2-208ENST00000488463 ARHGDIBP52566 201 aa11.31□□□□□ -0.6
COL9A2-208ENST00000488463 MORN2Q502X0 79 aa11.31□□□□□ -0.6
COL9A2-208ENST00000488463 LY6G6FQ5SQ64 297 aa11.31□□□□□ -0.6
COL9A2-208ENST00000488463 STEAP3Q658P3 488 aa11.31□□□□□ -0.6
COL9A2-208ENST00000488463 ODF3L1Q8IXM7 274 aa11.31□□□□□ -0.6
COL9A2-208ENST00000488463 PRR18Q8N4B5 295 aa11.31□□□□□ -0.6
COL9A2-208ENST00000488463 Q8N6K4 173 aa11.31□□□□□ -0.6
COL9A2-208ENST00000488463 DTX3Q8N9I9 347 aa11.31□□□□□ -0.6
COL9A2-208ENST00000488463 OR52L2PQ8NGH6 319 aa11.31□□□□□ -0.6
COL9A2-208ENST00000488463 CAPSLQ8WWF8 208 aa11.31□□□□□ -0.6
COL9A2-208ENST00000488463 RTN4IP1Q8WWV3 396 aaPredicted RBP11.31□□□□□ -0.6
COL9A2-208ENST00000488463 HDHD3Q9BSH5 251 aaPredicted RBP11.31□□□□□ -0.6
COL9A2-208ENST00000488463 URM1Q9BTM9 101 aaKnown RBP11.31□□□□□ -0.6
COL9A2-208ENST00000488463 AK3Q9UIJ7 227 aa11.31□□□□□ -0.6
COL9A2-208ENST00000488463 SSR3Q9UNL2 185 aa11.31□□□□□ -0.6
COL9A2-208ENST00000488463 KCNK7Q9Y2U2 307 aa11.31□□□□□ -0.6
COL9A2-208ENST00000488463 A0A0B4J203 849 aa11.3□□□□□ -0.6
COL9A2-208ENST00000488463 TSPAN15O95858 294 aa11.3□□□□□ -0.6
COL9A2-208ENST00000488463 FAM106CPP0CH98 169 aa11.3□□□□□ -0.6
COL9A2-208ENST00000488463 SMIM18P0DKX4 95 aa11.3□□□□□ -0.6
COL9A2-208ENST00000488463 PPP1CCP36873 323 aaKnown RBP11.3□□□□□ -0.6
COL9A2-208ENST00000488463 REG1BP48304 166 aa11.3□□□□□ -0.6
COL9A2-208ENST00000488463 VEGFCP49767 419 aa11.3□□□□□ -0.6
COL9A2-208ENST00000488463 MOGAT2Q3SYC2 334 aa11.3□□□□□ -0.6
COL9A2-208ENST00000488463 IZUMO1Q8IYV9 350 aa11.3□□□□□ -0.6
COL9A2-208ENST00000488463 ARHGAP5-AS1Q96IT6 56 aa11.3□□□□□ -0.6
COL9A2-208ENST00000488463 PECRQ9BY49 303 aa11.3□□□□□ -0.6
COL9A2-208ENST00000488463 RAB9BQ9NP90 201 aa11.3□□□□□ -0.6
COL9A2-208ENST00000488463 OR2S2Q9NQN1 319 aa11.3□□□□□ -0.6
COL9A2-208ENST00000488463 PLEKHJ1Q9NW61 149 aa11.3□□□□□ -0.6
COL9A2-208ENST00000488463 NDUFA13Q9P0J0 144 aa11.3□□□□□ -0.6
COL9A2-208ENST00000488463 GNG12Q9UBI6 72 aa11.3□□□□□ -0.6
COL9A2-208ENST00000488463 JPT1Q9UK76 154 aa11.3□□□□□ -0.6
COL9A2-208ENST00000488463 STUB1Q9UNE7 303 aa11.3□□□□□ -0.6
COL9A2-208ENST00000488463 SH2D7A6NKC9 451 aaPredicted RBP11.29□□□□□ -0.6
COL9A2-208ENST00000488463 ADARB2-AS1A8MUL3 147 aa11.29□□□□□ -0.6
COL9A2-208ENST00000488463 ZNF736B4DX44 427 aaPredicted RBP11.29□□□□□ -0.6
COL9A2-208ENST00000488463 M0QZ24 198 aa11.29□□□□□ -0.6
COL9A2-208ENST00000488463 RAB27BO00194 218 aa11.29□□□□□ -0.6
COL9A2-208ENST00000488463 PDCD5O14737 125 aa11.29□□□□□ -0.6
COL9A2-208ENST00000488463 YPEL1O60688 119 aa11.29□□□□□ -0.6
COL9A2-208ENST00000488463 GAPDHP04406 335 aaKnown RBP11.29□□□□□ -0.6
COL9A2-208ENST00000488463 VSIG10L2P0DP72 767 aa11.29□□□□□ -0.6
COL9A2-208ENST00000488463 CD36P16671 472 aa11.29□□□□□ -0.6
COL9A2-208ENST00000488463 RAB3BP20337 219 aa11.29□□□□□ -0.6
COL9A2-208ENST00000488463 ABCA11PQ4W5N1 156 aa11.29□□□□□ -0.6
COL9A2-208ENST00000488463 C11orf44Q8N8P7 122 aa11.29□□□□□ -0.6
COL9A2-208ENST00000488463 RBMXL1Q96E39 390 aaKnown RBP11.29□□□□□ -0.6
COL9A2-208ENST00000488463 AKR1E2Q96JD6 320 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms