RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 RPL27P61353 136 aaKnown RBP3.28□□□□□ -1.88
BRCA1-217ENST00000487825 BDH1Q02338 343 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 VWC2Q2TAL6 325 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 LGALS9BQ3B8N2 356 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 FGD3Q5JSP0 725 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 NANOGP8Q6NSW7 305 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 TCF23Q7RTU1 214 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 NAA40Q86UY6 237 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 ZNF561Q8N587 486 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 TCEANCQ8N8B7 351 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 OR4D10Q8NGI6 311 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 OR10G7Q8NGN6 311 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 OR2AE1Q8NHA4 323 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 TYMSOSQ8TAI1 123 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 RGP1Q92546 391 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-217ENST00000487825 SGTBQ96EQ0 304 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 OR5B12Q96R08 314 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 FEVQ99581 238 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 ZBTB18Q99592 522 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 PARD6BQ9BYG5 372 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 ALX4Q9H161 411 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-217ENST00000487825 TMEM133Q9H2Q1 129 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 FAM212BQ9NTI7 297 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-217ENST00000487825 THUMPD1Q9NXG2 353 aaKnown RBP3.28□□□□□ -1.88
BRCA1-217ENST00000487825 ZNF107Q9UII5 783 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-217ENST00000487825 ELF5Q9UKW6 265 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-217ENST00000487825 FBXO7Q9Y3I1 522 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 LHFPL6Q9Y693 200 aa3.28□□□□□ -1.88
BRCA1-217ENST00000487825 V9GYY5 206 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-217ENST00000487825 MFSD2BA6NFX1 497 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 A6NIZ1 184 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 TMEM210A6NLX4 147 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 ANKRD30BLA7E2S9 258 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 LEUTXA8MZ59 168 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 OOSP1A8MZH6 123 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 H7C1C5 153 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 M0R2N4 97 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 SLC1A7O00341 560 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 OR7A10O76100 309 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 NXPH4O95158 308 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 IGLV1-47P01700 117 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 MT-ND1P03886 318 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 CSN3P07498 182 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 PIPP12273 146 aaPredicted RBP3.27□□□□□ -1.89
BRCA1-217ENST00000487825 AREGP15514 252 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 FUT1P19526 365 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 VDAC1P21796 283 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 PRKACBP22694 351 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 GLRA1P23415 457 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 BMI1P35226 326 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 DDOSTP39656 456 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 RAP1BP61224 184 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 LCN6P62502 163 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 RAP1AP62834 184 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 LRP2P98164 4655 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 EMX2Q04743 252 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 PDZK1IP1Q13113 114 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 ZNF146Q15072 292 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 GLYATL3Q5SZD4 288 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 AGBL2Q5U5Z8 902 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 Q5VSD8 79 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 LCN12Q6JVE5 192 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 TIFABQ6ZNK6 161 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 ZNF621Q6ZSS3 439 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 BATF2Q8N1L9 274 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 CD177Q8N6Q3 437 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 ZNF676Q8N7Q3 588 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 LRTM2Q8N967 370 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 ZNF596Q8TC21 504 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 LIPHQ8WWY8 451 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 RPL3LQ92901 407 aaKnown RBP3.27□□□□□ -1.89
BRCA1-217ENST00000487825 MAL2Q969L2 176 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 C7orf34Q96L11 122 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 ZNF714Q96N38 554 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 TOLLIPQ9H0E2 274 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 WFDC10AQ9H1F0 79 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 ABCG5Q9H222 651 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 SRD5A3Q9H8P0 318 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 GSN-AS1Q9NRJ2 163 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 PYCARDQ9ULZ3 195 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 SNX12Q9UMY4 172 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 TP53TG1Q9Y2A0 90 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 MRPS7Q9Y2R9 242 aaKnown RBP3.27□□□□□ -1.89
BRCA1-217ENST00000487825 WSB1Q9Y6I7 421 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 COMMD3-BMI1R4GMX3 469 aa3.27□□□□□ -1.89
BRCA1-217ENST00000487825 SERTM2A0A1B0GWG4 89 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 RFPL4AA6NLU0 287 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 CPSF4LA6NMK7 179 aaKnown RBP3.26□□□□□ -1.89
BRCA1-217ENST00000487825 RFPL4AL1F8VTS6 287 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 LY6LH3BQJ8 138 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 M0R135 149 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 CHRNGP07510 517 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 VIMP08670 466 aaKnown RBP3.26□□□□□ -1.89
BRCA1-217ENST00000487825 STAG3L3P0CL85 134 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 OR5H8P0DN80 308 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 ANXA8P13928 327 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 ZNF3P17036 446 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 S100A3P33764 101 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 CEACAM3P40198 252 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 PLTPP55058 493 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms