RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 HENMT1Q5T8I9 393 aaKnown RBP1.37□□□□□ -2.19
LTN1-206ENST00000486427 YIPF7Q8N8F6 280 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 ZNRF2Q8NHG8 242 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 METTL17Q9H7H0 456 aaPredicted RBP1.37□□□□□ -2.19
LTN1-206ENST00000486427 DMAC2Q9NW81 257 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 ATAD5Q96QE3 1844 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 SYNRGQ9UMZ2 1314 aa1.37□□□□□ -2.19
LTN1-206ENST00000486427 PRRC2BQ5JSZ5 2229 aaKnown RBP1.36□□□□□ -2.19
LTN1-206ENST00000486427 GOLGA8QA0A0J9YX86 632 aa1.36□□□□□ -2.19
LTN1-206ENST00000486427 EFCAB9A8MZ26 197 aa1.36□□□□□ -2.19
LTN1-206ENST00000486427 H3BSA7 217 aa1.36□□□□□ -2.19
LTN1-206ENST00000486427 TOR1AO14656 332 aa1.36□□□□□ -2.19
LTN1-206ENST00000486427 PHYHO14832 338 aa1.36□□□□□ -2.19
LTN1-206ENST00000486427 CRYGDP07320 174 aa1.36□□□□□ -2.19
LTN1-206ENST00000486427 FBP1P09467 338 aa1.36□□□□□ -2.19
LTN1-206ENST00000486427 IGHV3-30-3P0DP02 117 aa1.36□□□□□ -2.19
LTN1-206ENST00000486427 ZNF7P17097 686 aaPredicted RBP1.36□□□□□ -2.19
LTN1-206ENST00000486427 DYNLL1P63167 89 aaKnown RBP1.36□□□□□ -2.19
LTN1-206ENST00000486427 HES1Q14469 280 aa1.36□□□□□ -2.19
LTN1-206ENST00000486427 PDGFRLQ15198 375 aa1.36□□□□□ -2.19
LTN1-206ENST00000486427 C2orf73Q8N5S3 287 aaPredicted RBP1.36□□□□□ -2.19
LTN1-206ENST00000486427 OR4P4Q8NGL7 312 aa1.36□□□□□ -2.19
LTN1-206ENST00000486427 CCDC127Q96BQ5 260 aa1.36□□□□□ -2.19
LTN1-206ENST00000486427 C1QTNF6Q9BXI9 259 aa1.36□□□□□ -2.19
LTN1-206ENST00000486427 COMMD9Q9P000 198 aa1.36□□□□□ -2.19
LTN1-206ENST00000486427 SCML1Q9UN30 329 aa1.36□□□□□ -2.19
LTN1-206ENST00000486427 PTPRJQ12913 1337 aa1.36□□□□□ -2.19
LTN1-206ENST00000486427 B4DEV8 164 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 SYNGR1O43759 233 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 TNFAIP8O95379 198 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 OR4A8P0C604 315 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 CPMP14384 443 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 GADD45AP24522 165 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 PSMA1P25786 263 aaKnown RBP1.35□□□□□ -2.19
LTN1-206ENST00000486427 RCVRNP35243 200 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 SPAM1P38567 509 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 ACTR1BP42025 376 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 GABARAPL2P60520 117 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 FAM3AP98173 230 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 TIMM23BQ5SRD1 257 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 ZBTB8OSQ8IWT0 167 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 SPERTQ8NA61 448 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 TAMM41Q96BW9 452 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 DNAJC30Q96LL9 226 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 FAM210AQ96ND0 272 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 CYTH2Q99418 400 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 EBNA1BP2Q99848 306 aaKnown RBP1.35□□□□□ -2.19
LTN1-206ENST00000486427 ZNF251Q9BRH9 671 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 UGT2B28Q9BY64 529 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 CHST5Q9GZS9 411 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 GTSF1LQ9H1H1 148 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 SMDT1Q9H4I9 107 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 C16orf95Q9H693 158 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 GBF1Q92538 1859 aa1.35□□□□□ -2.19
LTN1-206ENST00000486427 OTOFQ9HC10 1997 aa1.34□□□□□ -2.19
LTN1-206ENST00000486427 A0A0J9YX75 114 aa1.34□□□□□ -2.19
LTN1-206ENST00000486427 K7EQS6 105 aa1.34□□□□□ -2.19
LTN1-206ENST00000486427 SULT1C2O00338 296 aa1.34□□□□□ -2.19
LTN1-206ENST00000486427 YKT6O15498 198 aa1.34□□□□□ -2.19
LTN1-206ENST00000486427 CDK14O94921 469 aa1.34□□□□□ -2.19
LTN1-206ENST00000486427 RAB36O95755 333 aa1.34□□□□□ -2.19
LTN1-206ENST00000486427 GTF2BQ00403 316 aa1.34□□□□□ -2.19
LTN1-206ENST00000486427 DEFA6Q01524 100 aa1.34□□□□□ -2.19
LTN1-206ENST00000486427 ZNF117Q03924 483 aa1.34□□□□□ -2.19
LTN1-206ENST00000486427 PRDX4Q13162 271 aa1.34□□□□□ -2.19
LTN1-206ENST00000486427 SYCP1Q15431 976 aa1.34□□□□□ -2.19
LTN1-206ENST00000486427 MRPL51Q4U2R6 128 aaKnown RBP1.34□□□□□ -2.19
LTN1-206ENST00000486427 CENPWQ5EE01 88 aa1.34□□□□□ -2.19
LTN1-206ENST00000486427 C17orf78Q8N4C9 275 aa1.34□□□□□ -2.19
LTN1-206ENST00000486427 ERMNQ8TAM6 284 aa1.34□□□□□ -2.19
LTN1-206ENST00000486427 TMEM216Q9P0N5 145 aa1.34□□□□□ -2.19
LTN1-206ENST00000486427 MRPS16Q9Y3D3 137 aaKnown RBP1.34□□□□□ -2.19
LTN1-206ENST00000486427 CLUHO75153 1309 aa1.34□□□□□ -2.2
LTN1-206ENST00000486427 KMT2BQ9UMN6 2715 aaPredicted RBP1.33□□□□□ -2.2
LTN1-206ENST00000486427 MUC21A0A0G2JKD1 596 aa1.33□□□□□ -2.2
LTN1-206ENST00000486427 MUC21A0A140T8X8 626 aa1.33□□□□□ -2.2
LTN1-206ENST00000486427 A0A1W2PQL4 384 aaPredicted RBP1.33□□□□□ -2.2
LTN1-206ENST00000486427 C19orf71A6NCJ1 209 aa1.33□□□□□ -2.2
LTN1-206ENST00000486427 ZNF860A6NHJ4 632 aa1.33□□□□□ -2.2
LTN1-206ENST00000486427 NQO1P15559 274 aaKnown RBP1.33□□□□□ -2.2
LTN1-206ENST00000486427 AKR1C2P52895 323 aa1.33□□□□□ -2.2
LTN1-206ENST00000486427 PDK2Q15119 407 aa1.33□□□□□ -2.2
LTN1-206ENST00000486427 USF2Q15853 346 aaPredicted RBP1.33□□□□□ -2.2
LTN1-206ENST00000486427 RBM48Q5RL73 367 aaKnown RBP1.33□□□□□ -2.2
LTN1-206ENST00000486427 OR5K1Q8NHB7 308 aa1.33□□□□□ -2.2
LTN1-206ENST00000486427 DYNC2LI1Q8TCX1 351 aa1.33□□□□□ -2.2
LTN1-206ENST00000486427 PPWD1Q96BP3 646 aaKnown RBP1.33□□□□□ -2.2
LTN1-206ENST00000486427 ZNF625Q96I27 306 aaPredicted RBP1.33□□□□□ -2.2
LTN1-206ENST00000486427 TMEM56Q96MV1 263 aa1.33□□□□□ -2.2
LTN1-206ENST00000486427 OR52A5Q9H2C5 316 aa1.33□□□□□ -2.2
LTN1-206ENST00000486427 FAM206AQ9NX38 181 aa1.33□□□□□ -2.2
LTN1-206ENST00000486427 MINOS1-NBL1R4GNA1 71 aa1.33□□□□□ -2.2
LTN1-206ENST00000486427 TRPM6Q9BX84 2022 aa1.32□□□□□ -2.2
LTN1-206ENST00000486427 K7ERQ8 282 aa1.32□□□□□ -2.2
LTN1-206ENST00000486427 M0QYV0 167 aa1.32□□□□□ -2.2
LTN1-206ENST00000486427 TRAPPC3O43617 180 aa1.32□□□□□ -2.2
LTN1-206ENST00000486427 CYTH3O43739 400 aa1.32□□□□□ -2.2
LTN1-206ENST00000486427 MPZL2O60487 215 aa1.32□□□□□ -2.2
LTN1-206ENST00000486427 SOD1P00441 154 aa1.32□□□□□ -2.2
LTN1-206ENST00000486427 PSMB3P49720 205 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms