RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 MAS1P04201 325 aa9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 IGLL1P15814 213 aa9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 CALRP27797 417 aaKnown RBP9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 SLC6A1P30531 599 aa9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 ZNF816Q0VGE8 651 aaPredicted RBP9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 HNF4GQ14541 408 aa9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 TMEM30BQ3MIR4 351 aa9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 Q3ZCU0 254 aa9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 C6orf183Q5T699 404 aa9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 FOXB2Q5VYV0 432 aa9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 C22orf42Q6IC83 251 aa9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 SLC35E3Q7Z769 313 aa9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 COMMD1Q8N668 190 aa9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 NKAIN3Q8N8D7 197 aa9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 C8orf31Q8N9H6 132 aa9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 FUNDC2Q9BWH2 189 aa9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 GON7Q9BXV9 100 aa9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 ZFP57Q9NU63 452 aa9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 AURKAIP1Q9NWT8 199 aaPredicted RBP9.49□□□□□ -0.89
SNRNP200-206ENST00000484372 TRAV39A0A0B4J263 110 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 SHISA3A0PJX4 238 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 NCBP2LA6PVI3 153 aaKnown RBP9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 TCTEX1D4Q5JR98 221 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 UTF1Q5T230 341 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 TRAT1Q6PIZ9 186 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 GPR141Q7Z602 305 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 ANKRD13BQ86YJ7 626 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 LINC00311Q8N616 119 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 C5orf56Q8N8D9 126 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 OR2T10Q8NGZ9 312 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 CCDC107Q8WV48 283 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 KCTD7Q96MP8 289 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 CHCHD6Q9BRQ6 235 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 UQCC2Q9BRT2 126 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 CENPOQ9BU64 300 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 GFOD1Q9NXC2 390 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 ETAA1Q9NY74 926 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 TRAPPC2LQ9UL33 140 aa9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 MRPS28Q9Y2Q9 187 aaKnown RBP9.48□□□□□ -0.89
SNRNP200-206ENST00000484372 IGHV1-3A0A0C4DH29 117 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 A0A1W2PPE3 182 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 FAM90A10PA6NDY2 464 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 FAM90A7PA6NKC0 464 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 NUDT19A8MXV4 375 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 FAM90A23PA8MXZ1 464 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 TXNL1O43396 289 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 AIREO43918 545 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 CA11O75493 328 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 MT-ND4P03905 459 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 PSMD7P51665 324 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 DIAPH2-AS1Q14236 149 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 C1orf100Q5SVJ3 147 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 GLT8D1Q68CQ7 371 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 AWAT2Q6E213 333 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 GLIPR1L1Q6UWM5 242 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 ZNF497Q6ZNH5 498 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 ZNF329Q86UD4 541 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 GFI1Q99684 422 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 MCRIP2Q9BUT9 160 aaKnown RBP9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 KCNIP1Q9NZI2 227 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 GNG12Q9UBI6 72 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 ZMAT5Q9UDW3 170 aaKnown RBP9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 AK6Q9Y3D8 172 aaKnown RBP9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 PEX16Q9Y5Y5 336 aa9.47□□□□□ -0.89
SNRNP200-206ENST00000484372 LOC100506127A0A0U1RQW1 187 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 C15orf65H3BRN8 121 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 AP4M1O00189 453 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 PDCD5O14737 125 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 MPIG6BO95866 241 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 IGHG2P01859 326 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 GLAP06280 429 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 MYL9P24844 172 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 CD1BP29016 333 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 REG1BP48304 166 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 RPL23AP62750 156 aaKnown RBP9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 EBI3Q14213 229 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 RAB12Q6IQ22 244 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 C10orf99Q6UWK7 81 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 TPRA1Q86W33 373 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 TGIF2LXQ8IUE1 241 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 IZUMO1Q8IYV9 350 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 OR8H1Q8NGG4 311 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 EAF1Q96JC9 268 aaPredicted RBP9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 RASL11BQ9BPW5 248 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 RNF167Q9H6Y7 350 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 LIN7CQ9NUP9 197 aaKnown RBP9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 GHRLQ9UBU3 117 aa9.46□□□□□ -0.9
SNRNP200-206ENST00000484372 IGHV3-43A0A0B4J1X8 118 aa9.45□□□□□ -0.9
SNRNP200-206ENST00000484372 IGHV3-72A0A0B4J1Y9 119 aa9.45□□□□□ -0.9
SNRNP200-206ENST00000484372 A0A1W2PP11 408 aa9.45□□□□□ -0.9
SNRNP200-206ENST00000484372 SLC22A1O15245 554 aa9.45□□□□□ -0.9
SNRNP200-206ENST00000484372 CRTAPO75718 401 aaPredicted RBP9.45□□□□□ -0.9
SNRNP200-206ENST00000484372 GABARAPO95166 117 aa9.45□□□□□ -0.9
SNRNP200-206ENST00000484372 MOSP00540 346 aa9.45□□□□□ -0.9
SNRNP200-206ENST00000484372 IGHV3-43DP0DP04 118 aa9.45□□□□□ -0.9
SNRNP200-206ENST00000484372 RAB3BP20337 219 aa9.45□□□□□ -0.9
SNRNP200-206ENST00000484372 FUT3P21217 361 aa9.45□□□□□ -0.9
SNRNP200-206ENST00000484372 SDC2P34741 201 aa9.45□□□□□ -0.9
SNRNP200-206ENST00000484372 MYCNOSP40205 109 aa9.45□□□□□ -0.9
SNRNP200-206ENST00000484372 CTF1Q16619 201 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms