RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 FIP1L1Q6UN15 594 aaKnown RBP13.03□□□□□ -0.32
C9orf3-218ENST00000482056 MDS2Q8NDY4 140 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 OR10G4Q8NGN3 311 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 RAB39BQ96DA2 213 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 BCL2L14Q9BZR8 327 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 SIRT7Q9NRC8 400 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 PSENENQ9NZ42 101 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 H3BP45 60 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 AP4M1O00189 453 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 OR2H2O95918 312 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 CBR1P16152 277 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 OR2B8PP59922 312 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 P4HA3Q7Z4N8 544 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 SLC35E3Q7Z769 313 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 PSMG3Q9BT73 122 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-218ENST00000482056 CDH20Q9HBT6 801 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 PPP1R3CQ9UQK1 317 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 ZNF407Q9C0G0 2248 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 ESPL1Q14674 2120 aa13.02□□□□□ -0.32
C9orf3-218ENST00000482056 DNAJC13O75165 2243 aa13.02□□□□□ -0.32
C9orf3-218ENST00000482056 CXorf65A6NEN9 183 aa13.02□□□□□ -0.32
C9orf3-218ENST00000482056 KIAA1324LA8MWY0 1029 aaPredicted RBP13.02□□□□□ -0.32
C9orf3-218ENST00000482056 NXPH2O95156 264 aa13.02□□□□□ -0.32
C9orf3-218ENST00000482056 IGHV2-5P01817 119 aa13.02□□□□□ -0.32
C9orf3-218ENST00000482056 OR8U8P0C7N1 319 aa13.02□□□□□ -0.32
C9orf3-218ENST00000482056 ZNF16P17020 682 aaPredicted RBP13.02□□□□□ -0.32
C9orf3-218ENST00000482056 DLK1P80370 383 aa13.02□□□□□ -0.32
C9orf3-218ENST00000482056 TESK1Q15569 626 aa13.02□□□□□ -0.32
C9orf3-218ENST00000482056 HEPN1Q6WQI6 88 aa13.02□□□□□ -0.32
C9orf3-218ENST00000482056 PRR18Q8N4B5 295 aa13.02□□□□□ -0.32
C9orf3-218ENST00000482056 CYB561D1Q8N8Q1 229 aa13.02□□□□□ -0.32
C9orf3-218ENST00000482056 SCCPDHQ8NBX0 429 aa13.02□□□□□ -0.32
C9orf3-218ENST00000482056 MUCL1Q96DR8 90 aa13.02□□□□□ -0.32
C9orf3-218ENST00000482056 TRGV5A0A0B4J1U4 118 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 LOC102723971A0A1B0GUV8 181 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 B4DEV8 164 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 SELEP16581 610 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 SPINK2P20155 84 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 UBE2NP61088 152 aaKnown RBP13.01□□□□□ -0.33
C9orf3-218ENST00000482056 B2MP61769 119 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 PPP1CBP62140 327 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 TGFBR3Q03167 851 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 GABRA6Q16445 453 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.01□□□□□ -0.33
C9orf3-218ENST00000482056 LILRB2Q8N423 598 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 WDYHV1Q96HA8 205 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 YPEL4Q96NS1 127 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 GUCD1Q96NT3 240 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 ZNF251Q9BRH9 671 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 DEFB127Q9H1M4 99 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 TMEM9BQ9NQ34 198 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 A0A1W2PPE3 182 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 ARGFXA6NJG6 315 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 FAM90A26D6RGX4 464 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 IAPPP10997 89 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 RPS10P46783 165 aaKnown RBP13.01□□□□□ -0.33
C9orf3-218ENST00000482056 ERVK11-1P61568 191 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 SEBOXQ9HB31 216 aaPredicted RBP13.01□□□□□ -0.33
C9orf3-218ENST00000482056 KCNIP1Q9NZI2 227 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 COLQQ9Y215 455 aaPredicted RBP13.01□□□□□ -0.33
C9orf3-218ENST00000482056 WIPI2Q9Y4P8 454 aa13.01□□□□□ -0.33
C9orf3-218ENST00000482056 A0A1W2PNU3 283 aaPredicted RBP13□□□□□ -0.33
C9orf3-218ENST00000482056 LNP1A1A4G5 178 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 H0YL77 283 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 SMPD2O60906 423 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 IGKV1-39P01597 117 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 IGKV1D-39P04432 117 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 PGA5P0DJD9 388 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 NQO2P16083 231 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 CEACAM6P40199 344 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 EIF2S3P41091 472 aaKnown RBP13□□□□□ -0.33
C9orf3-218ENST00000482056 SERF2P84101 59 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 ZNF146Q15072 292 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 ZNF295-AS1Q8N0V1 137 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 NANPQ8TBE9 248 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 PARD6GQ9BYG4 376 aaPredicted RBP13□□□□□ -0.33
C9orf3-218ENST00000482056 CISD1Q9NZ45 108 aaKnown RBP13□□□□□ -0.33
C9orf3-218ENST00000482056 GNG13Q9P2W3 67 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 OR14J1Q9UGF5 321 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 TNRC18O15417 2968 aaPredicted RBP13□□□□□ -0.33
C9orf3-218ENST00000482056 A0A1W2PR80 420 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 TMEM210A6NLX4 147 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 WDR1O75083 606 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 IFNA1P01562 189 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 IGKV1-5P01602 117 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 IGLV2-14P01704 120 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 METTL15P1P0C7V9 234 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 RAC2P15153 192 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 ACSF3Q4G176 576 aaPredicted RBP13□□□□□ -0.33
C9orf3-218ENST00000482056 ZNF787Q6DD87 383 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 Q6ZRM9 215 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 ZNF525Q8N782 197 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 ZBTB34Q8NCN2 500 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 PINX1Q96BK5 328 aaKnown RBP13□□□□□ -0.33
C9orf3-218ENST00000482056 GMPPAQ96IJ6 420 aaPredicted RBP13□□□□□ -0.33
C9orf3-218ENST00000482056 MBNL3Q9NUK0 354 aaKnown RBP13□□□□□ -0.33
C9orf3-218ENST00000482056 IL17BQ9UHF5 180 aa13□□□□□ -0.33
C9orf3-218ENST00000482056 TRAV39A0A0B4J263 110 aa12.99□□□□□ -0.33
C9orf3-218ENST00000482056 PNRC1Q12796 327 aaPredicted RBP12.99□□□□□ -0.33
C9orf3-218ENST00000482056 KIAA0141Q14154 515 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms