RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 PPP1R27Q86WC6 154 aa11.33□□□□□ -0.6
HDAC6-224ENST00000481929 CPNE2Q96FN4 548 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-224ENST00000481929 IL4I1Q96RQ9 567 aa11.33□□□□□ -0.6
HDAC6-224ENST00000481929 MRPL20Q9BYC9 149 aaKnown RBP11.33□□□□□ -0.6
HDAC6-224ENST00000481929 SRD5A3Q9H8P0 318 aa11.33□□□□□ -0.6
HDAC6-224ENST00000481929 SLC2A8Q9NY64 477 aa11.33□□□□□ -0.6
HDAC6-224ENST00000481929 SIGLEC8Q9NYZ4 499 aa11.33□□□□□ -0.6
HDAC6-224ENST00000481929 FRRS1LQ9P0K9 344 aa11.33□□□□□ -0.6
HDAC6-224ENST00000481929 ZNF581Q9P0T4 197 aa11.33□□□□□ -0.6
HDAC6-224ENST00000481929 C13orf42A0A1B0GVH6 325 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 AIPO00170 330 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 MAGEB3O15480 346 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 FAM107AO95990 144 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 ATP6V1E1P36543 226 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 EFNB1P98172 346 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 MS4A2Q01362 244 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 AKIRIN2Q53H80 203 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 LPCAT4Q643R3 524 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 STEAP3Q658P3 488 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 ADGRG5Q8IZF4 528 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 DEFB125Q8N687 156 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 OR2K2Q8NGT1 345 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 NEK7Q8TDX7 302 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 TNFAIP8L1Q8WVP5 186 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 GPER1Q99527 375 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 IFT22Q9H7X7 185 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 ARL8BQ9NVJ2 186 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 ST3GAL6Q9Y274 331 aa11.32□□□□□ -0.6
HDAC6-224ENST00000481929 KLK5Q9Y337 293 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-224ENST00000481929 ANKRD34BA5PLL1 514 aa11.31□□□□□ -0.6
HDAC6-224ENST00000481929 HTR3BO95264 441 aa11.31□□□□□ -0.6
HDAC6-224ENST00000481929 TFAP2AP05549 437 aa11.31□□□□□ -0.6
HDAC6-224ENST00000481929 CSN3P07498 182 aa11.31□□□□□ -0.6
HDAC6-224ENST00000481929 EGR2P11161 476 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-224ENST00000481929 NANOS3P60323 173 aaKnown RBP11.31□□□□□ -0.6
HDAC6-224ENST00000481929 TATDN3Q17R31 274 aa11.31□□□□□ -0.6
HDAC6-224ENST00000481929 MOGAT2Q3SYC2 334 aa11.31□□□□□ -0.6
HDAC6-224ENST00000481929 LAX1Q8IWV1 398 aa11.31□□□□□ -0.6
HDAC6-224ENST00000481929 ARHGAP24Q8N264 748 aa11.31□□□□□ -0.6
HDAC6-224ENST00000481929 PRR18Q8N4B5 295 aa11.31□□□□□ -0.6
HDAC6-224ENST00000481929 OR5D14Q8NGL3 314 aa11.31□□□□□ -0.6
HDAC6-224ENST00000481929 RDH12Q96NR8 316 aa11.31□□□□□ -0.6
HDAC6-224ENST00000481929 FAM103A1Q9BTL3 118 aaKnown RBP11.31□□□□□ -0.6
HDAC6-224ENST00000481929 FAM192AQ9GZU8 254 aa11.31□□□□□ -0.6
HDAC6-224ENST00000481929 FBXL15Q9H469 300 aa11.31□□□□□ -0.6
HDAC6-224ENST00000481929 GABRPO00591 440 aa11.3□□□□□ -0.6
HDAC6-224ENST00000481929 RRHO14718 337 aa11.3□□□□□ -0.6
HDAC6-224ENST00000481929 HBZP02008 142 aa11.3□□□□□ -0.6
HDAC6-224ENST00000481929 MT-ND4P03905 459 aa11.3□□□□□ -0.6
HDAC6-224ENST00000481929 HTR1AP08908 422 aa11.3□□□□□ -0.6
HDAC6-224ENST00000481929 ZNF85Q03923 595 aa11.3□□□□□ -0.6
HDAC6-224ENST00000481929 ATAD3CQ5T2N8 411 aa11.3□□□□□ -0.6
HDAC6-224ENST00000481929 FDX2Q6P4F2 183 aa11.3□□□□□ -0.6
HDAC6-224ENST00000481929 ZNF497Q6ZNH5 498 aa11.3□□□□□ -0.6
HDAC6-224ENST00000481929 SERPINA12Q8IW75 414 aa11.3□□□□□ -0.6
HDAC6-224ENST00000481929 STX19Q8N4C7 294 aa11.3□□□□□ -0.6
HDAC6-224ENST00000481929 LFNGQ8NES3 379 aa11.3□□□□□ -0.6
HDAC6-224ENST00000481929 KCTD12Q96CX2 325 aaKnown RBP11.3□□□□□ -0.6
HDAC6-224ENST00000481929 WFDC10AQ9H1F0 79 aa11.3□□□□□ -0.6
HDAC6-224ENST00000481929 ZNF355PQ9NSJ1 428 aa11.3□□□□□ -0.6
HDAC6-224ENST00000481929 TRAPPC2LQ9UL33 140 aa11.3□□□□□ -0.6
HDAC6-224ENST00000481929 A0A0G2JLM5 398 aa11.29□□□□□ -0.6
HDAC6-224ENST00000481929 OR11H12B2RN74 326 aa11.29□□□□□ -0.6
HDAC6-224ENST00000481929 CD7P09564 240 aa11.29□□□□□ -0.6
HDAC6-224ENST00000481929 CCR9P51686 369 aa11.29□□□□□ -0.6
HDAC6-224ENST00000481929 RBM11P57052 281 aaKnown RBP11.29□□□□□ -0.6
HDAC6-224ENST00000481929 NHLRC3Q5JS37 347 aa11.29□□□□□ -0.6
HDAC6-224ENST00000481929 C6orf183Q5T699 404 aa11.29□□□□□ -0.6
HDAC6-224ENST00000481929 C12orf73Q69YU5 71 aa11.29□□□□□ -0.6
HDAC6-224ENST00000481929 LGALS9CQ6DKI2 356 aa11.29□□□□□ -0.6
HDAC6-224ENST00000481929 OR52N1Q8NH53 320 aa11.29□□□□□ -0.6
HDAC6-224ENST00000481929 OR1L1Q8NH94 360 aa11.29□□□□□ -0.6
HDAC6-224ENST00000481929 CANT1Q8WVQ1 401 aa11.29□□□□□ -0.6
HDAC6-224ENST00000481929 ABHD14AQ9BUJ0 271 aa11.29□□□□□ -0.6
HDAC6-224ENST00000481929 SLC23A1Q9UHI7 598 aa11.29□□□□□ -0.6
HDAC6-224ENST00000481929 GAB2Q9UQC2 676 aa11.29□□□□□ -0.6
HDAC6-224ENST00000481929 FCN1O00602 326 aa11.28□□□□□ -0.6
HDAC6-224ENST00000481929 GEMIN2O14893 280 aaKnown RBP11.28□□□□□ -0.6
HDAC6-224ENST00000481929 DAPP51397 102 aa11.28□□□□□ -0.6
HDAC6-224ENST00000481929 SYT6Q5T7P8 510 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-224ENST00000481929 KCTD20Q7Z5Y7 419 aa11.28□□□□□ -0.6
HDAC6-224ENST00000481929 LINC00596Q86U02 117 aa11.28□□□□□ -0.6
HDAC6-224ENST00000481929 POC5Q8NA72 575 aa11.28□□□□□ -0.6
HDAC6-224ENST00000481929 ASB9Q96DX5 294 aa11.28□□□□□ -0.6
HDAC6-224ENST00000481929 OVOL2Q9BRP0 275 aa11.28□□□□□ -0.6
HDAC6-224ENST00000481929 ARGLU1Q9NWB6 273 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-224ENST00000481929 A0A0J9YWU9 116 aa11.27□□□□□ -0.61
HDAC6-224ENST00000481929 OR4C45A6NMZ5 311 aa11.27□□□□□ -0.61
HDAC6-224ENST00000481929 ZAR1LA6NP61 321 aa11.27□□□□□ -0.61
HDAC6-224ENST00000481929 H3BUA1 57 aa11.27□□□□□ -0.61
HDAC6-224ENST00000481929 OR2A4O95047 310 aa11.27□□□□□ -0.61
HDAC6-224ENST00000481929 HOXB6P17509 224 aaKnown RBP11.27□□□□□ -0.61
HDAC6-224ENST00000481929 RAB3AP20336 220 aa11.27□□□□□ -0.61
HDAC6-224ENST00000481929 MECP2P51608 486 aaKnown RBP11.27□□□□□ -0.61
HDAC6-224ENST00000481929 ALKBH1Q13686 389 aaKnown RBP11.27□□□□□ -0.61
HDAC6-224ENST00000481929 MPV17LQ2QL34 196 aa11.27□□□□□ -0.61
HDAC6-224ENST00000481929 MORN2Q502X0 79 aa11.27□□□□□ -0.61
HDAC6-224ENST00000481929 TRAT1Q6PIZ9 186 aa11.27□□□□□ -0.61
HDAC6-224ENST00000481929 FAM131AQ6UXB0 335 aa11.27□□□□□ -0.61
HDAC6-224ENST00000481929 ASCL4Q6XD76 172 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms