RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 GHITMQ9H3K2 345 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 C12orf4Q9NQ89 552 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 HILPDAQ9Y5L2 63 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 ETV7Q9Y603 341 aa12.46□□□□□ -0.41
C9orf3-217ENST00000479161 A0A0A6YYH2 397 aa12.45□□□□□ -0.42
C9orf3-217ENST00000479161 CLPSL1A2RUU4 121 aa12.45□□□□□ -0.42
C9orf3-217ENST00000479161 A6NJ64 397 aa12.45□□□□□ -0.42
C9orf3-217ENST00000479161 ITGB1BP1O14713 200 aa12.45□□□□□ -0.42
C9orf3-217ENST00000479161 RGS11O94810 467 aa12.45□□□□□ -0.42
C9orf3-217ENST00000479161 KIR2DS4P43632 304 aa12.45□□□□□ -0.42
C9orf3-217ENST00000479161 ZNF816Q0VGE8 651 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-217ENST00000479161 MORN2Q502X0 79 aa12.45□□□□□ -0.42
C9orf3-217ENST00000479161 ST6GALNAC6Q969X2 333 aa12.45□□□□□ -0.42
C9orf3-217ENST00000479161 ABRACLQ9P1F3 81 aa12.45□□□□□ -0.42
C9orf3-217ENST00000479161 AK3Q9UIJ7 227 aa12.45□□□□□ -0.42
C9orf3-217ENST00000479161 DAPK2Q9UIK4 370 aa12.45□□□□□ -0.42
C9orf3-217ENST00000479161 KCNK7Q9Y2U2 307 aa12.45□□□□□ -0.42
C9orf3-217ENST00000479161 MFNGO00587 321 aa12.44□□□□□ -0.42
C9orf3-217ENST00000479161 TXNL1O43396 289 aa12.44□□□□□ -0.42
C9orf3-217ENST00000479161 SMIM18P0DKX4 95 aa12.44□□□□□ -0.42
C9orf3-217ENST00000479161 SLC2A2P11168 524 aaPredicted RBP12.44□□□□□ -0.42
C9orf3-217ENST00000479161 HIST1H1DP16402 221 aaKnown RBP12.44□□□□□ -0.42
C9orf3-217ENST00000479161 IL3RAP26951 378 aa12.44□□□□□ -0.42
C9orf3-217ENST00000479161 EFNB2P52799 333 aa12.44□□□□□ -0.42
C9orf3-217ENST00000479161 UTF1Q5T230 341 aa12.44□□□□□ -0.42
C9orf3-217ENST00000479161 Q6ZS49 121 aa12.44□□□□□ -0.42
C9orf3-217ENST00000479161 Q6ZSV7 163 aa12.44□□□□□ -0.42
C9orf3-217ENST00000479161 C3orf56Q8N813 242 aa12.44□□□□□ -0.42
C9orf3-217ENST00000479161 OR10X1Q8NGY0 326 aa12.44□□□□□ -0.42
C9orf3-217ENST00000479161 RPEQ96AT9 228 aa12.44□□□□□ -0.42
C9orf3-217ENST00000479161 CMSS1Q9BQ75 279 aaKnown RBP12.44□□□□□ -0.42
C9orf3-217ENST00000479161 MRPS26Q9BYN8 205 aaKnown RBP12.44□□□□□ -0.42
C9orf3-217ENST00000479161 NPFFR1Q9GZQ6 430 aa12.44□□□□□ -0.42
C9orf3-217ENST00000479161 Q9N2K0 584 aa12.44□□□□□ -0.42
C9orf3-217ENST00000479161 OR2S2Q9NQN1 319 aa12.44□□□□□ -0.42
C9orf3-217ENST00000479161 TNFRSF19Q9NS68 423 aa12.44□□□□□ -0.42
C9orf3-217ENST00000479161 GNG12Q9UBI6 72 aa12.44□□□□□ -0.42
C9orf3-217ENST00000479161 FAM172BPA6NC97 362 aa12.43□□□□□ -0.42
C9orf3-217ENST00000479161 GAPDHP04406 335 aaKnown RBP12.43□□□□□ -0.42
C9orf3-217ENST00000479161 PLA2G7Q13093 441 aa12.43□□□□□ -0.42
C9orf3-217ENST00000479161 OLFML2AQ68BL7 652 aa12.43□□□□□ -0.42
C9orf3-217ENST00000479161 Q6ZPA2 131 aa12.43□□□□□ -0.42
C9orf3-217ENST00000479161 Q8N2B8 174 aa12.43□□□□□ -0.42
C9orf3-217ENST00000479161 OR1L1Q8NH94 360 aa12.43□□□□□ -0.42
C9orf3-217ENST00000479161 LINC01006Q8NI28 216 aa12.43□□□□□ -0.42
C9orf3-217ENST00000479161 TOMM40LQ969M1 308 aa12.43□□□□□ -0.42
C9orf3-217ENST00000479161 AKR1E2Q96JD6 320 aa12.43□□□□□ -0.42
C9orf3-217ENST00000479161 FUNDC2Q9BWH2 189 aa12.43□□□□□ -0.42
C9orf3-217ENST00000479161 TOLLIPQ9H0E2 274 aa12.43□□□□□ -0.42
C9orf3-217ENST00000479161 RNF167Q9H6Y7 350 aa12.43□□□□□ -0.42
C9orf3-217ENST00000479161 A0A1W2PPI3 338 aa12.42□□□□□ -0.42
C9orf3-217ENST00000479161 LPLP06858 475 aa12.42□□□□□ -0.42
C9orf3-217ENST00000479161 GSTP1P09211 210 aaKnown RBP12.42□□□□□ -0.42
C9orf3-217ENST00000479161 FAM106CPP0CH98 169 aa12.42□□□□□ -0.42
C9orf3-217ENST00000479161 PITPNAQ00169 270 aa12.42□□□□□ -0.42
C9orf3-217ENST00000479161 EBI3Q14213 229 aa12.42□□□□□ -0.42
C9orf3-217ENST00000479161 LTC4SQ16873 150 aa12.42□□□□□ -0.42
C9orf3-217ENST00000479161 MOGAT2Q3SYC2 334 aa12.42□□□□□ -0.42
C9orf3-217ENST00000479161 CT45A1Q5HYN5 189 aa12.42□□□□□ -0.42
C9orf3-217ENST00000479161 SHISA2Q6UWI4 295 aa12.42□□□□□ -0.42
C9orf3-217ENST00000479161 CCBE1Q6UXH8 406 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-217ENST00000479161 ANKRD13BQ86YJ7 626 aa12.42□□□□□ -0.42
C9orf3-217ENST00000479161 CT45A3Q8NHU0 189 aa12.42□□□□□ -0.42
C9orf3-217ENST00000479161 LEAP2Q969E1 77 aa12.42□□□□□ -0.42
C9orf3-217ENST00000479161 KCTD12Q96CX2 325 aaKnown RBP12.42□□□□□ -0.42
C9orf3-217ENST00000479161 CHMP1AQ9HD42 196 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-217ENST00000479161 SPATA2Q9UM82 520 aa12.42□□□□□ -0.42
C9orf3-217ENST00000479161 A0A0B4J203 849 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 M0QZK8 103 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 LANCL1O43813 399 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 CD3GP09693 182 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 MDKP21741 143 aaPredicted RBP12.41□□□□□ -0.42
C9orf3-217ENST00000479161 DTYMKP23919 212 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 PAX6P26367 422 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 ALDH3B2P48448 385 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 SERPINB10P48595 397 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 RAB13P51153 203 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 ZNF134P52741 427 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 PROK1P58294 105 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 HLA-DRB3P79483 266 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 MRPS15P82914 257 aaKnown RBP12.41□□□□□ -0.42
C9orf3-217ENST00000479161 MXD1Q05195 221 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 KIR2DS1Q14954 304 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 LY6EQ16553 131 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 FAM71F2Q6NXP2 309 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 OR4C13Q8NGP0 309 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 CFHR4Q92496 578 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 RBM14Q96PK6 669 aaKnown RBP12.41□□□□□ -0.42
C9orf3-217ENST00000479161 ATG5Q9H1Y0 275 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 RHBDL2Q9NX52 303 aa12.41□□□□□ -0.42
C9orf3-217ENST00000479161 TRDCB7Z8K6 153 aa12.4□□□□□ -0.42
C9orf3-217ENST00000479161 HSD17B6O14756 317 aa12.4□□□□□ -0.42
C9orf3-217ENST00000479161 CHST1O43916 411 aa12.4□□□□□ -0.42
C9orf3-217ENST00000479161 OR2F2O95006 317 aa12.4□□□□□ -0.42
C9orf3-217ENST00000479161 TFAP2AP05549 437 aa12.4□□□□□ -0.42
C9orf3-217ENST00000479161 CLEC2LP0C7M8 214 aa12.4□□□□□ -0.42
C9orf3-217ENST00000479161 ZBTB25P24278 435 aa12.4□□□□□ -0.42
C9orf3-217ENST00000479161 RPS19P39019 145 aaKnown RBP12.4□□□□□ -0.42
C9orf3-217ENST00000479161 GNG10P50151 68 aa12.4□□□□□ -0.42
C9orf3-217ENST00000479161 PNLIPRP3Q17RR3 467 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms