RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 AK3Q9UIJ7 227 aa10.9□□□□□ -0.66
RAB5A-208ENST00000476544 RAB22AQ9UL26 194 aa10.9□□□□□ -0.66
RAB5A-208ENST00000476544 HSF4Q9ULV5 492 aa10.9□□□□□ -0.66
RAB5A-208ENST00000476544 STUB1Q9UNE7 303 aa10.9□□□□□ -0.66
RAB5A-208ENST00000476544 MEGF8Q7Z7M0 2845 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 TRBV6-6A0A0A6YYG2 114 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 SH2D7A6NKC9 451 aaPredicted RBP10.89□□□□□ -0.67
RAB5A-208ENST00000476544 H3BUI4 141 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 RAB3BP20337 219 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 GADD45AP24522 165 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 CEACAM3P40198 252 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 REG1BP48304 166 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 MADCAM1Q13477 382 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 EBI3Q14213 229 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 HMGN3Q15651 99 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 NEDD8Q15843 81 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 C6orf183Q5T699 404 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 ZNF554Q86TJ5 538 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 PRR18Q8N4B5 295 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 CREB3L1Q96BA8 519 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 CENPOQ9BU64 300 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 NPFFR1Q9GZQ6 430 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 PARP12Q9H0J9 701 aaKnown RBP10.89□□□□□ -0.67
RAB5A-208ENST00000476544 RANBP3Q9H6Z4 567 aaPredicted RBP10.89□□□□□ -0.67
RAB5A-208ENST00000476544 PLEKHJ1Q9NW61 149 aa10.89□□□□□ -0.67
RAB5A-208ENST00000476544 IGKV1-6A0A0C4DH72 117 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 PDCD5O14737 125 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 SPINT2O43291 252 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 BRS3P32247 399 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 SDC2P34741 201 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 PPP1CCP36873 323 aaKnown RBP10.88□□□□□ -0.67
RAB5A-208ENST00000476544 ZNF137PP52743 207 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 HTD2P86397 168 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 ZNF816Q0VGE8 651 aaPredicted RBP10.88□□□□□ -0.67
RAB5A-208ENST00000476544 Q3ZCU0 254 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 STEAP3Q658P3 488 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 Q6ZTK2 550 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 OR56B4Q8NH76 319 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 CAPSLQ8WWF8 208 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 RPEQ96AT9 228 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 YIPF6Q96EC8 236 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 URM1Q9BTM9 101 aaKnown RBP10.88□□□□□ -0.67
RAB5A-208ENST00000476544 RAB18Q9NP72 206 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 OR2S2Q9NQN1 319 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 PLSCR3Q9NRY6 295 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 PITPNC1Q9UKF7 332 aa10.88□□□□□ -0.67
RAB5A-208ENST00000476544 ELF5Q9UKW6 265 aaPredicted RBP10.88□□□□□ -0.67
RAB5A-208ENST00000476544 IGHV3-72A0A0B4J1Y9 119 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 IGHV1-3A0A0C4DH29 117 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 NOTOA8MTQ0 251 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 YPEL1O60688 119 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 PROP1O75360 226 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 OR2F2O95006 317 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 GAPDHP04406 335 aaKnown RBP10.87□□□□□ -0.67
RAB5A-208ENST00000476544 SNRNP70P08621 437 aaKnown RBP10.87□□□□□ -0.67
RAB5A-208ENST00000476544 SCTP09683 121 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 CD36P16671 472 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 TGFBR1P36897 503 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 HNF4GQ14541 408 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 TMEM95Q3KNT9 176 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 LY6G6FQ5SQ64 297 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 Q8N6K4 173 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 TSPAN14Q8NG11 270 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 OR4C13Q8NGP0 309 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 OR10X1Q8NGY0 326 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 TOMM40LQ969M1 308 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 RITA1Q96K30 269 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 YPEL2Q96QA6 119 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 CHCHD6Q9BRQ6 235 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 LIN7BQ9HAP6 207 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 Q9N2K0 584 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 GNG12Q9UBI6 72 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 SSR3Q9UNL2 185 aa10.87□□□□□ -0.67
RAB5A-208ENST00000476544 LINC01548A6NM66 108 aa10.86□□□□□ -0.67
RAB5A-208ENST00000476544 MYL9P24844 172 aa10.86□□□□□ -0.67
RAB5A-208ENST00000476544 RAB7AP51149 207 aa10.86□□□□□ -0.67
RAB5A-208ENST00000476544 TCTEX1D4Q5JR98 221 aa10.86□□□□□ -0.67
RAB5A-208ENST00000476544 CCDC144NLQ6NUI1 221 aa10.86□□□□□ -0.67
RAB5A-208ENST00000476544 C11orf88Q6PI97 169 aa10.86□□□□□ -0.67
RAB5A-208ENST00000476544 TRAT1Q6PIZ9 186 aa10.86□□□□□ -0.67
RAB5A-208ENST00000476544 TPRA1Q86W33 373 aa10.86□□□□□ -0.67
RAB5A-208ENST00000476544 OR8H3Q8N146 312 aa10.86□□□□□ -0.67
RAB5A-208ENST00000476544 KLHDC1Q8N7A1 406 aa10.86□□□□□ -0.67
RAB5A-208ENST00000476544 C11orf44Q8N8P7 122 aa10.86□□□□□ -0.67
RAB5A-208ENST00000476544 RTN4IP1Q8WWV3 396 aaPredicted RBP10.86□□□□□ -0.67
RAB5A-208ENST00000476544 ZNF251Q9BRH9 671 aa10.86□□□□□ -0.67
RAB5A-208ENST00000476544 SLC25A33Q9BSK2 321 aa10.86□□□□□ -0.67
RAB5A-208ENST00000476544 PRSS22Q9GZN4 317 aa10.86□□□□□ -0.67
RAB5A-208ENST00000476544 KCNIP1Q9NZI2 227 aa10.86□□□□□ -0.67
RAB5A-208ENST00000476544 AMMECR1Q9Y4X0 333 aaPredicted RBP10.86□□□□□ -0.67
RAB5A-208ENST00000476544 ADARB2-AS1A8MUL3 147 aa10.85□□□□□ -0.67
RAB5A-208ENST00000476544 MFNGO00587 321 aa10.85□□□□□ -0.67
RAB5A-208ENST00000476544 HSD17B6O14756 317 aa10.85□□□□□ -0.67
RAB5A-208ENST00000476544 FAM106CPP0CH98 169 aa10.85□□□□□ -0.67
RAB5A-208ENST00000476544 SNRPBP14678 240 aaKnown RBP10.85□□□□□ -0.67
RAB5A-208ENST00000476544 GNB3P16520 340 aa10.85□□□□□ -0.67
RAB5A-208ENST00000476544 RAB6AP20340 208 aa10.85□□□□□ -0.67
RAB5A-208ENST00000476544 MNDAP41218 407 aa10.85□□□□□ -0.67
RAB5A-208ENST00000476544 HERPUD1Q15011 391 aa10.85□□□□□ -0.67
RAB5A-208ENST00000476544 ABCA11PQ4W5N1 156 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms