RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 GHRLQ9UBU3 117 aa14.63□□□□□ -0.07
COL7A1-209ENST00000474432 SERPINE3A8MV23 424 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 SPINT2O43291 252 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 CHATP28329 748 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 GPR12P47775 334 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 AQP4P55087 323 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 RPL23AP62750 156 aaKnown RBP14.62□□□□□ -0.07
COL7A1-209ENST00000474432 QRFPP83859 136 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 UNC119Q13432 240 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 GPR50Q13585 617 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 MORN2Q502X0 79 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 OR2W3Q7Z3T1 314 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 ODF3L1Q8IXM7 274 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 STPG2Q8N412 459 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 PRR18Q8N4B5 295 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 OR52L2PQ8NGH6 319 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 PHYHIPQ92561 330 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 GFI1Q99684 422 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 SULT4A1Q9BR01 284 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 TMED9Q9BVK6 235 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 ABCG5Q9H222 651 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 KCNK15Q9H427 330 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 DUSP21Q9H596 190 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 LIN7CQ9NUP9 197 aaKnown RBP14.62□□□□□ -0.07
COL7A1-209ENST00000474432 GNG12Q9UBI6 72 aa14.62□□□□□ -0.07
COL7A1-209ENST00000474432 MPIG6BO95866 241 aa14.61□□□□□ -0.07
COL7A1-209ENST00000474432 PF4P02776 101 aa14.61□□□□□ -0.07
COL7A1-209ENST00000474432 IL3RAP26951 378 aa14.61□□□□□ -0.07
COL7A1-209ENST00000474432 HTR2CP28335 458 aa14.61□□□□□ -0.07
COL7A1-209ENST00000474432 F2RL1P55085 397 aa14.61□□□□□ -0.07
COL7A1-209ENST00000474432 RPS27AP62979 156 aaKnown RBP14.61□□□□□ -0.07
COL7A1-209ENST00000474432 KHDC1LQ5JSQ8 128 aa14.61□□□□□ -0.07
COL7A1-209ENST00000474432 STEAP3Q658P3 488 aa14.61□□□□□ -0.07
COL7A1-209ENST00000474432 TRAT1Q6PIZ9 186 aa14.61□□□□□ -0.07
COL7A1-209ENST00000474432 ZNF554Q86TJ5 538 aa14.61□□□□□ -0.07
COL7A1-209ENST00000474432 MRPL41Q8IXM3 137 aaKnown RBP14.61□□□□□ -0.07
COL7A1-209ENST00000474432 FAM71E2Q8N5Q1 922 aa14.61□□□□□ -0.07
COL7A1-209ENST00000474432 S1PR3Q99500 378 aa14.61□□□□□ -0.07
COL7A1-209ENST00000474432 A0A0A6YYD4 124 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 NCBP2LA6PVI3 153 aaKnown RBP14.6□□□□□ -0.07
COL7A1-209ENST00000474432 SLC22A1O15245 554 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 LANCL1O43813 399 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 MOSP00540 346 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 UCHL1P09936 223 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 UBBP0CG47 229 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 SRMP19623 302 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 THBS3P49746 956 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 KRTAP10-11P60412 298 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 TMEM91Q6ZNR0 172 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 CEACAM19Q7Z692 300 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 MRAPQ8TCY5 172 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 HSPB9Q9BQS6 159 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 NICN1Q9BSH3 213 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 FAAP24Q9BTP7 215 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 TM2D1Q9BX74 207 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 CST11Q9H112 138 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 VCXQ9H320 206 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 OR2S2Q9NQN1 319 aa14.6□□□□□ -0.07
COL7A1-209ENST00000474432 TMEM14DPA8MWL7 114 aa14.59□□□□□ -0.07
COL7A1-209ENST00000474432 PPP1CCP36873 323 aaKnown RBP14.59□□□□□ -0.07
COL7A1-209ENST00000474432 HTD2P86397 168 aa14.59□□□□□ -0.07
COL7A1-209ENST00000474432 TPBGQ13641 420 aa14.59□□□□□ -0.07
COL7A1-209ENST00000474432 MED22Q15528 200 aa14.59□□□□□ -0.07
COL7A1-209ENST00000474432 NKAPLQ5M9Q1 402 aa14.59□□□□□ -0.07
COL7A1-209ENST00000474432 RBM48Q5RL73 367 aaKnown RBP14.59□□□□□ -0.07
COL7A1-209ENST00000474432 C8orf86Q6ZUL3 223 aa14.59□□□□□ -0.07
COL7A1-209ENST00000474432 C6orf201Q7Z4U5 140 aa14.59□□□□□ -0.07
COL7A1-209ENST00000474432 RCC1LQ96I51 464 aaKnown RBP14.59□□□□□ -0.07
COL7A1-209ENST00000474432 RITA1Q96K30 269 aa14.59□□□□□ -0.07
COL7A1-209ENST00000474432 P2RX4Q99571 388 aa14.59□□□□□ -0.07
COL7A1-209ENST00000474432 RAB9BQ9NP90 201 aa14.59□□□□□ -0.07
COL7A1-209ENST00000474432 ZFP57Q9NU63 452 aa14.59□□□□□ -0.07
COL7A1-209ENST00000474432 K7EIL1 84 aa14.58□□□□□ -0.08
COL7A1-209ENST00000474432 AP4M1O00189 453 aa14.58□□□□□ -0.08
COL7A1-209ENST00000474432 TXNL1O43396 289 aa14.58□□□□□ -0.08
COL7A1-209ENST00000474432 NAPSAO96009 420 aa14.58□□□□□ -0.08
COL7A1-209ENST00000474432 MYF6P23409 242 aa14.58□□□□□ -0.08
COL7A1-209ENST00000474432 CFHR3Q02985 330 aa14.58□□□□□ -0.08
COL7A1-209ENST00000474432 LSAMPQ13449 338 aa14.58□□□□□ -0.08
COL7A1-209ENST00000474432 HMGN3Q15651 99 aa14.58□□□□□ -0.08
COL7A1-209ENST00000474432 HSD17B12Q53GQ0 312 aa14.58□□□□□ -0.08
COL7A1-209ENST00000474432 LY6G6FQ5SQ64 297 aa14.58□□□□□ -0.08
COL7A1-209ENST00000474432 LIPKQ5VXJ0 399 aa14.58□□□□□ -0.08
COL7A1-209ENST00000474432 GLT8D1Q68CQ7 371 aa14.58□□□□□ -0.08
COL7A1-209ENST00000474432 ZNF880Q6PDB4 577 aa14.58□□□□□ -0.08
COL7A1-209ENST00000474432 FOXRED2Q8IWF2 684 aa14.58□□□□□ -0.08
COL7A1-209ENST00000474432 TMEM203Q969S6 136 aa14.58□□□□□ -0.08
COL7A1-209ENST00000474432 SCN3BQ9NY72 215 aa14.58□□□□□ -0.08
COL7A1-209ENST00000474432 JPT1Q9UK76 154 aa14.58□□□□□ -0.08
COL7A1-209ENST00000474432 YPEL1O60688 119 aa14.57□□□□□ -0.08
COL7A1-209ENST00000474432 EGFEM1PQ0D2K5 195 aa14.57□□□□□ -0.08
COL7A1-209ENST00000474432 LCNL1Q6ZST4 164 aa14.57□□□□□ -0.08
COL7A1-209ENST00000474432 COMMD1Q8N668 190 aa14.57□□□□□ -0.08
COL7A1-209ENST00000474432 RNF152Q8N8N0 203 aa14.57□□□□□ -0.08
COL7A1-209ENST00000474432 OR8H1Q8NGG4 311 aa14.57□□□□□ -0.08
COL7A1-209ENST00000474432 YPEL2Q96QA6 119 aa14.57□□□□□ -0.08
COL7A1-209ENST00000474432 ABHD14AQ9BUJ0 271 aa14.57□□□□□ -0.08
COL7A1-209ENST00000474432 TMEM59Q9BXS4 323 aa14.57□□□□□ -0.08
COL7A1-209ENST00000474432 LPAR5Q9H1C0 372 aa14.57□□□□□ -0.08
COL7A1-209ENST00000474432 KCNIP1Q9NZI2 227 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms