RNA–Protein interactions for RNA: ENST00000474160.1

SYF2-203, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2

Gene SYF2, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-203ENST00000474160 HMGN3Q15651 99 aa15.22■□□□□ 0.03
SYF2-203ENST00000474160 SLC25A48Q6ZT89 311 aaKnown RBP15.22■□□□□ 0.03
SYF2-203ENST00000474160 OR2T6Q8NHC8 308 aa15.22■□□□□ 0.03
SYF2-203ENST00000474160 OR51E2Q9H255 320 aa15.22■□□□□ 0.03
SYF2-203ENST00000474160 M0QZK8 103 aa15.21■□□□□ 0.03
SYF2-203ENST00000474160 CHST1O43916 411 aa15.21■□□□□ 0.03
SYF2-203ENST00000474160 YPEL1O60688 119 aa15.21■□□□□ 0.03
SYF2-203ENST00000474160 SCGNO76038 276 aa15.21■□□□□ 0.03
SYF2-203ENST00000474160 GAPDHP04406 335 aaKnown RBP15.21■□□□□ 0.03
SYF2-203ENST00000474160 JUNBP17275 347 aaPredicted RBP15.21■□□□□ 0.03
SYF2-203ENST00000474160 RAB13P51153 203 aa15.21■□□□□ 0.03
SYF2-203ENST00000474160 TMEM50BP56557 158 aa15.21■□□□□ 0.03
SYF2-203ENST00000474160 CCBE1Q6UXH8 406 aaPredicted RBP15.21■□□□□ 0.03
SYF2-203ENST00000474160 Q8N2B8 174 aa15.21■□□□□ 0.03
SYF2-203ENST00000474160 CAPSLQ8WWF8 208 aa15.21■□□□□ 0.03
SYF2-203ENST00000474160 LEAP2Q969E1 77 aa15.21■□□□□ 0.03
SYF2-203ENST00000474160 YPEL2Q96QA6 119 aa15.21■□□□□ 0.03
SYF2-203ENST00000474160 CHCHD6Q9BRQ6 235 aa15.21■□□□□ 0.03
SYF2-203ENST00000474160 PRSS22Q9GZN4 317 aa15.21■□□□□ 0.03
SYF2-203ENST00000474160 CHMP1AQ9HD42 196 aaPredicted RBP15.21■□□□□ 0.03
SYF2-203ENST00000474160 C12orf4Q9NQ89 552 aa15.21■□□□□ 0.03
SYF2-203ENST00000474160 OR2S2Q9NQN1 319 aa15.21■□□□□ 0.03
SYF2-203ENST00000474160 FAM90A9PA6NNJ1 464 aa15.2■□□□□ 0.02
SYF2-203ENST00000474160 HABP2Q14520 560 aaPredicted RBP15.2■□□□□ 0.02
SYF2-203ENST00000474160 UTF1Q5T230 341 aa15.2■□□□□ 0.02
SYF2-203ENST00000474160 ZNF439Q8NDP4 499 aa15.2■□□□□ 0.02
SYF2-203ENST00000474160 OR1L1Q8NH94 360 aa15.2■□□□□ 0.02
SYF2-203ENST00000474160 RAB3CQ96E17 227 aa15.2■□□□□ 0.02
SYF2-203ENST00000474160 CENPOQ9BU64 300 aa15.2■□□□□ 0.02
SYF2-203ENST00000474160 PECRQ9BY49 303 aa15.2■□□□□ 0.02
SYF2-203ENST00000474160 AK3Q9UIJ7 227 aa15.2■□□□□ 0.02
SYF2-203ENST00000474160 A0A1W2PPI3 338 aa15.19■□□□□ 0.02
SYF2-203ENST00000474160 HSD17B6O14756 317 aa15.19■□□□□ 0.02
SYF2-203ENST00000474160 OR2F2O95006 317 aa15.19■□□□□ 0.02
SYF2-203ENST00000474160 MRPS15P82914 257 aaKnown RBP15.19■□□□□ 0.02
SYF2-203ENST00000474160 MORN2Q502X0 79 aa15.19■□□□□ 0.02
SYF2-203ENST00000474160 SFXN4Q6P4A7 337 aa15.19■□□□□ 0.02
SYF2-203ENST00000474160 NR2C2APQ86WQ0 139 aa15.19■□□□□ 0.02
SYF2-203ENST00000474160 CROCCP3Q8IVE0 287 aa15.19■□□□□ 0.02
SYF2-203ENST00000474160 PRR18Q8N4B5 295 aa15.19■□□□□ 0.02
SYF2-203ENST00000474160 OR10R2Q8NGX6 335 aa15.19■□□□□ 0.02
SYF2-203ENST00000474160 TAF15Q92804 592 aaKnown RBP eCLIP15.19■□□□□ 0.02
SYF2-203ENST00000474160 ARHGAP5-AS1Q96IT6 56 aa15.19■□□□□ 0.02
SYF2-203ENST00000474160 RBM14Q96PK6 669 aaKnown RBP15.19■□□□□ 0.02
SYF2-203ENST00000474160 CITED1Q99966 193 aa15.19■□□□□ 0.02
SYF2-203ENST00000474160 CMSS1Q9BQ75 279 aaKnown RBP15.19■□□□□ 0.02
SYF2-203ENST00000474160 GHITMQ9H3K2 345 aa15.19■□□□□ 0.02
SYF2-203ENST00000474160 LOC100506127A0A0U1RQW1 187 aa15.18■□□□□ 0.02
SYF2-203ENST00000474160 SERPINE3A8MV23 424 aa15.18■□□□□ 0.02
SYF2-203ENST00000474160 ITGB1BP1O14713 200 aa15.18■□□□□ 0.02
SYF2-203ENST00000474160 IGHV3-7P01780 117 aa15.18■□□□□ 0.02
SYF2-203ENST00000474160 SDC2P34741 201 aa15.18■□□□□ 0.02
SYF2-203ENST00000474160 EFNB2P52799 333 aa15.18■□□□□ 0.02
SYF2-203ENST00000474160 TMEM219Q86XT9 240 aa15.18■□□□□ 0.02
SYF2-203ENST00000474160 ST6GALNAC6Q969X2 333 aa15.18■□□□□ 0.02
SYF2-203ENST00000474160 IGHV3-43A0A0B4J1X8 118 aa15.17■□□□□ 0.02
SYF2-203ENST00000474160 RAB27BO00194 218 aa15.17■□□□□ 0.02
SYF2-203ENST00000474160 TIMM23O14925 209 aa15.17■□□□□ 0.02
SYF2-203ENST00000474160 DIRAS3O95661 229 aa15.17■□□□□ 0.02
SYF2-203ENST00000474160 IGHV3-43DP0DP04 118 aa15.17■□□□□ 0.02
SYF2-203ENST00000474160 CT45A1Q5HYN5 189 aa15.17■□□□□ 0.02
SYF2-203ENST00000474160 PLAC9Q5JTB6 97 aa15.17■□□□□ 0.02
SYF2-203ENST00000474160 CT45A3Q8NHU0 189 aa15.17■□□□□ 0.02
SYF2-203ENST00000474160 UBALD1Q8TB05 177 aa15.17■□□□□ 0.02
SYF2-203ENST00000474160 CFHR4Q92496 578 aa15.17■□□□□ 0.02
SYF2-203ENST00000474160 YIPF6Q96EC8 236 aa15.17■□□□□ 0.02
SYF2-203ENST00000474160 SLC25A33Q9BSK2 321 aa15.17■□□□□ 0.02
SYF2-203ENST00000474160 ABHD14AQ9BUJ0 271 aa15.17■□□□□ 0.02
SYF2-203ENST00000474160 Q9N2K0 584 aa15.17■□□□□ 0.02
SYF2-203ENST00000474160 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.17■□□□□ 0.02
SYF2-203ENST00000474160 ETV7Q9Y603 341 aa15.17■□□□□ 0.02
SYF2-203ENST00000474160 IGHV1-3A0A0C4DH29 117 aa15.16■□□□□ 0.02
SYF2-203ENST00000474160 LANCL1O43813 399 aa15.16■□□□□ 0.02
SYF2-203ENST00000474160 CD3GP09693 182 aa15.16■□□□□ 0.02
SYF2-203ENST00000474160 HIST1H1DP16402 221 aaKnown RBP15.16■□□□□ 0.02
SYF2-203ENST00000474160 HLA-DRB3P79483 266 aa15.16■□□□□ 0.02
SYF2-203ENST00000474160 EBI3Q14213 229 aa15.16■□□□□ 0.02
SYF2-203ENST00000474160 SRSF7Q16629 238 aaKnown RBP eCLIP15.16■□□□□ 0.02
SYF2-203ENST00000474160 FAM71F2Q6NXP2 309 aa15.16■□□□□ 0.02
SYF2-203ENST00000474160 IZUMO1Q8IYV9 350 aa15.16■□□□□ 0.02
SYF2-203ENST00000474160 OR10V1Q8NGI7 309 aa15.16■□□□□ 0.02
SYF2-203ENST00000474160 RTN4IP1Q8WWV3 396 aaPredicted RBP15.16■□□□□ 0.02
SYF2-203ENST00000474160 ZNF702PQ9H963 129 aa15.16■□□□□ 0.02
SYF2-203ENST00000474160 DAPK2Q9UIK4 370 aa15.16■□□□□ 0.02
SYF2-203ENST00000474160 A0A1W2PPE3 182 aa15.15■□□□□ 0.02
SYF2-203ENST00000474160 MFNGO00587 321 aa15.15■□□□□ 0.02
SYF2-203ENST00000474160 FGF16O43320 207 aa15.15■□□□□ 0.02
SYF2-203ENST00000474160 AIREO43918 545 aa15.15■□□□□ 0.02
SYF2-203ENST00000474160 SLC2A2P11168 524 aaPredicted RBP15.15■□□□□ 0.02
SYF2-203ENST00000474160 CD1BP29016 333 aa15.15■□□□□ 0.02
SYF2-203ENST00000474160 KIR2DS1Q14954 304 aa15.15■□□□□ 0.02
SYF2-203ENST00000474160 TGIF2LXQ8IUE1 241 aa15.15■□□□□ 0.02
SYF2-203ENST00000474160 DRAM1Q8N682 238 aa15.15■□□□□ 0.02
SYF2-203ENST00000474160 OR2AK2Q8NG84 335 aa15.15■□□□□ 0.02
SYF2-203ENST00000474160 OR56B4Q8NH76 319 aa15.15■□□□□ 0.02
SYF2-203ENST00000474160 SETD6Q8TBK2 473 aa15.15■□□□□ 0.02
SYF2-203ENST00000474160 EDARADDQ8WWZ3 215 aa15.15■□□□□ 0.02
SYF2-203ENST00000474160 MOB4Q9Y3A3 225 aa15.15■□□□□ 0.02
SYF2-203ENST00000474160 A0A0A6YYH2 397 aa15.14■□□□□ 0.01
SYF2-203ENST00000474160 A6NJ64 397 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms