RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 LEAP2Q969E1 77 aa11.48□□□□□ -0.57
BRCA1-211ENST00000472490 TOMM40LQ969M1 308 aa11.48□□□□□ -0.57
BRCA1-211ENST00000472490 OCSTAMPQ9BR26 566 aa11.48□□□□□ -0.57
BRCA1-211ENST00000472490 IGHV3-7P01780 117 aa11.47□□□□□ -0.57
BRCA1-211ENST00000472490 TALDO1P37837 337 aa11.47□□□□□ -0.57
BRCA1-211ENST00000472490 RPS19P39019 145 aaKnown RBP11.47□□□□□ -0.57
BRCA1-211ENST00000472490 PLA2G7Q13093 441 aa11.47□□□□□ -0.57
BRCA1-211ENST00000472490 HMGN3Q15651 99 aa11.47□□□□□ -0.57
BRCA1-211ENST00000472490 PLA1AQ53H76 456 aa11.47□□□□□ -0.57
BRCA1-211ENST00000472490 LDLRAD2Q5SZI1 272 aa11.47□□□□□ -0.57
BRCA1-211ENST00000472490 ZNF880Q6PDB4 577 aa11.47□□□□□ -0.57
BRCA1-211ENST00000472490 LINC00311Q8N616 119 aa11.47□□□□□ -0.57
BRCA1-211ENST00000472490 OR1L1Q8NH94 360 aa11.47□□□□□ -0.57
BRCA1-211ENST00000472490 UBALD1Q8TB05 177 aa11.47□□□□□ -0.57
BRCA1-211ENST00000472490 IL1F10Q8WWZ1 152 aa11.47□□□□□ -0.57
BRCA1-211ENST00000472490 SPATA2Q9UM82 520 aa11.47□□□□□ -0.57
BRCA1-211ENST00000472490 TCF19Q9Y242 345 aa11.47□□□□□ -0.57
BRCA1-211ENST00000472490 MXRA5Q9NR99 2828 aa11.47□□□□□ -0.57
BRCA1-211ENST00000472490 A0A0A6YYH2 397 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 IGHV3-43A0A0B4J1X8 118 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 A6NJ64 397 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 LY6LH3BQJ8 138 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 MFNGO00587 321 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 YPEL1O60688 119 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 GABARAPO95166 117 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 NDUFA7O95182 113 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 TFAP2AP05549 437 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 IGHV3-43DP0DP04 118 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 GNB3P16520 340 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 PAX6P26367 422 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 KIR2DS4P43632 304 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 SERPINB10P48595 397 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 PITPNAQ00169 270 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 ARFRP1Q13795 201 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 KIR2DS1Q14954 304 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 MOGAT2Q3SYC2 334 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 MORN2Q502X0 79 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 LY6G6FQ5SQ64 297 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 OR8H3Q8N146 312 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 DYNAPQ8N1N2 210 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 SLC25A46Q96AG3 418 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 AKR1E2Q96JD6 320 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 YPEL2Q96QA6 119 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 BEX1Q9HBH7 125 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 Q9N2K0 584 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.46□□□□□ -0.57
BRCA1-211ENST00000472490 DIABLOQ9NR28 239 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 RHBDL2Q9NX52 303 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 KCNK7Q9Y2U2 307 aa11.46□□□□□ -0.57
BRCA1-211ENST00000472490 A0A075B6Q4 140 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 TXNL1O43396 289 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 GAPDHP04406 335 aaKnown RBP11.45□□□□□ -0.58
BRCA1-211ENST00000472490 GSTP1P09211 210 aaKnown RBP11.45□□□□□ -0.58
BRCA1-211ENST00000472490 FAM106CPP0CH98 169 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 ZBTB25P24278 435 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 ALDH3B2P48448 385 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 RAG2P55895 527 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 VBP1P61758 197 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 NCS1P62166 190 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 HLA-DRB3P79483 266 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 LY6EQ16553 131 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 CDNFQ49AH0 187 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 AWAT1Q58HT5 328 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 GPR107Q5VW38 600 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 SLC25A48Q6ZT89 311 aaKnown RBP11.45□□□□□ -0.58
BRCA1-211ENST00000472490 C3orf56Q8N813 242 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 OR10V1Q8NGI7 309 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 PIFOQ8TCI5 191 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 CAPSLQ8WWF8 208 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 HDHD3Q9BSH5 251 aaPredicted RBP11.45□□□□□ -0.58
BRCA1-211ENST00000472490 NPFFR1Q9GZQ6 430 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 C1RLQ9NZP8 487 aa11.45□□□□□ -0.58
BRCA1-211ENST00000472490 TRDCB7Z8K6 153 aa11.44□□□□□ -0.58
BRCA1-211ENST00000472490 HSPA12AO43301 675 aa11.44□□□□□ -0.58
BRCA1-211ENST00000472490 TGFBR1P36897 503 aa11.44□□□□□ -0.58
BRCA1-211ENST00000472490 RPL5P46777 297 aaKnown RBP11.44□□□□□ -0.58
BRCA1-211ENST00000472490 RAB13P51153 203 aa11.44□□□□□ -0.58
BRCA1-211ENST00000472490 RORCP51449 518 aa11.44□□□□□ -0.58
BRCA1-211ENST00000472490 SRSF7Q16629 238 aaKnown RBP eCLIP11.44□□□□□ -0.58
BRCA1-211ENST00000472490 UTF1Q5T230 341 aa11.44□□□□□ -0.58
BRCA1-211ENST00000472490 HACD4Q5VWC8 232 aa11.44□□□□□ -0.58
BRCA1-211ENST00000472490 C16orf82Q7Z2V1 217 aa11.44□□□□□ -0.58
BRCA1-211ENST00000472490 OR2AK2Q8NG84 335 aa11.44□□□□□ -0.58
BRCA1-211ENST00000472490 OR52L2PQ8NGH6 319 aa11.44□□□□□ -0.58
BRCA1-211ENST00000472490 OR4A4PQ8NGN8 299 aa11.44□□□□□ -0.58
BRCA1-211ENST00000472490 ACOT12Q8WYK0 555 aa11.44□□□□□ -0.58
BRCA1-211ENST00000472490 AP3S1Q92572 193 aa11.44□□□□□ -0.58
BRCA1-211ENST00000472490 S100A16Q96FQ6 103 aaKnown RBP11.44□□□□□ -0.58
BRCA1-211ENST00000472490 ABHD14AQ9BUJ0 271 aa11.44□□□□□ -0.58
BRCA1-211ENST00000472490 GHITMQ9H3K2 345 aa11.44□□□□□ -0.58
BRCA1-211ENST00000472490 RANBP3Q9H6Z4 567 aaPredicted RBP11.44□□□□□ -0.58
BRCA1-211ENST00000472490 MMP24Q9Y5R2 645 aa11.44□□□□□ -0.58
BRCA1-211ENST00000472490 A0A1W2PPE3 182 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 A6NDX4 124 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 HSD17B6O14756 317 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 TSPAN9O75954 239 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 DIRAS3O95661 229 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 FCGR3AP08637 254 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 DTYMKP23919 212 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 PPP1CCP36873 323 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms