RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 TGIF2LXQ8IUE1 241 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 OR2T10Q8NGZ9 312 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 CT45A3Q8NHU0 189 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 MRPL30Q8TCC3 161 aaKnown RBP7.13□□□□□ -1.27
USF1-204ENST00000472217 CHPT1Q8WUD6 406 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 PHYHIPQ92561 330 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 RBMXL1Q96E39 390 aaKnown RBP7.13□□□□□ -1.27
USF1-204ENST00000472217 CST11Q9H112 138 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 KCNK15Q9H427 330 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 TAF9BQ9HBM6 251 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 RAB9BQ9NP90 201 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 MBNL3Q9NUK0 354 aaKnown RBP7.13□□□□□ -1.27
USF1-204ENST00000472217 NECAP2Q9NVZ3 263 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 AURKAIP1Q9NWT8 199 aaPredicted RBP7.13□□□□□ -1.27
USF1-204ENST00000472217 SCN3BQ9NY72 215 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 GHRLQ9UBU3 117 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 LINC00527Q9UJ94 153 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 LINC01548A6NM66 108 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 NCBP2LA6PVI3 153 aaKnown RBP7.12□□□□□ -1.27
USF1-204ENST00000472217 TXNL1O43396 289 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 MOSP00540 346 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 UCHL1P09936 223 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 SRMP19623 302 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 CHATP28329 748 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 CD1BP29016 333 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 RPS27AP62979 156 aaKnown RBP7.12□□□□□ -1.27
USF1-204ENST00000472217 MORN2Q502X0 79 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 HSD17B12Q53GQ0 312 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 LIPKQ5VXJ0 399 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 FOXB2Q5VYV0 432 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 GLT8D1Q68CQ7 371 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 ETV3LQ6ZN32 361 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 C6orf201Q7Z4U5 140 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 CEACAM19Q7Z692 300 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 ZNF554Q86TJ5 538 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 FOXRED2Q8IWF2 684 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 STPG2Q8N412 459 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 Q8N9W7 124 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 OR52L2PQ8NGH6 319 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 TMEM203Q969S6 136 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 NEDD4LQ96PU5 975 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 SULT4A1Q9BR01 284 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 TMEM59Q9BXS4 323 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 ABCG5Q9H222 651 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 OR2S2Q9NQN1 319 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 LIN7CQ9NUP9 197 aaKnown RBP7.12□□□□□ -1.27
USF1-204ENST00000472217 KCNIP1Q9NZI2 227 aa7.12□□□□□ -1.27
USF1-204ENST00000472217 AP4M1O00189 453 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 SLC22A1O15245 554 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 LANCL1O43813 399 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 CD37P11049 281 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 MYF6P23409 242 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 HTR2CP28335 458 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 PPP1CCP36873 323 aaKnown RBP7.11□□□□□ -1.27
USF1-204ENST00000472217 GPR12P47775 334 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 RPL23AP62750 156 aaKnown RBP7.11□□□□□ -1.27
USF1-204ENST00000472217 RPS25P62851 125 aaKnown RBP7.11□□□□□ -1.27
USF1-204ENST00000472217 QRFPP83859 136 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 UNC119Q13432 240 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 STEAP3Q658P3 488 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 TMEM91Q6ZNR0 172 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 C18orf65Q6ZTR6 163 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 OR2W3Q7Z3T1 314 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 FAM71E2Q8N5Q1 922 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 LINC00482Q8N8I6 264 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 OR6M1Q8NGM8 313 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 KCNG3Q8TAE7 436 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 MRAPQ8TCY5 172 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 UFD1Q92890 307 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 RCC1LQ96I51 464 aaKnown RBP7.11□□□□□ -1.27
USF1-204ENST00000472217 S1PR3Q99500 378 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 NICN1Q9BSH3 213 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 FAAP24Q9BTP7 215 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 ABHD14AQ9BUJ0 271 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 TM2D1Q9BX74 207 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 ANKRD60Q9BZ19 345 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 DUSP21Q9H596 190 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 PLSCR3Q9NRY6 295 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 JPT1Q9UK76 154 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 TPRKBQ9Y3C4 175 aa7.11□□□□□ -1.27
USF1-204ENST00000472217 A0A0A6YYD4 124 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 TMEM14DPA8MWL7 114 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 NUDT19A8MXV4 375 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 RGS10O43665 173 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 BPNT1O95861 308 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 HSMCR30P0CW71 290 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 THBS3P49746 956 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 F2RL1P55085 397 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 SLC35B1P78383 322 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 HTD2P86397 168 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 LSAMPQ13449 338 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 TPBGQ13641 420 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 HMGN3Q15651 99 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 C8orf86Q6ZUL3 223 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 MRPL41Q8IXM3 137 aaKnown RBP7.1□□□□□ -1.27
USF1-204ENST00000472217 ODF3L1Q8IXM7 274 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 SVOPQ8N4V2 548 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 COMMD1Q8N668 190 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 OR51D1Q8NGF3 324 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 OR8H1Q8NGG4 311 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms