RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 OR8B12Q8NGG6 310 aa11.64□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 MRGPRFQ96AM1 343 aa11.64□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 TOMM7Q9P0U1 55 aa11.64□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 PDCD6O75340 191 aa11.64□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ZFPL1O95159 310 aa11.64□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ITGBL1O95965 494 aaPredicted RBP11.64□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 SRD5A2P31213 254 aa11.64□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 RBFOX2O43251 390 aaKnown RBP eCLIP11.64□□□□□ -0.552e-10■■■■■ 36.9
NPHP3-ACAD11-201ENST00000471702 CST2P09228 141 aa11.64□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ASAH1Q13510 395 aa11.64□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 SLC25A40Q8TBP6 338 aa11.64□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 MS4A5Q9H3V2 200 aa11.64□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 CTLA4P16410 223 aa11.64□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 EPHA8P29322 1005 aaPredicted RBP11.64□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 FOXL2P58012 376 aa11.64□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 RNF165Q6ZSG1 346 aa11.64□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 IFT22Q9H7X7 185 aa11.64□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 SLC25A19Q9HC21 320 aa11.64□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 PLPP3O14495 311 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ZNF253O75346 499 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 C10orf113Q5VZT2 155 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 OVCH2Q7RTZ1 564 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 STXBP6Q8NFX7 210 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ZNF665Q9H7R5 613 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 NKG7Q16617 165 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 PRICKLE4Q2TBC4 344 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ASCL5Q7RTU5 278 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 UCN2Q96RP3 112 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 PTPRQQ9UMZ3 2332 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 HSPB2A8KAH6 182 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 NKX2-2O95096 273 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 HSPB2Q16082 182 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 OR2C3Q8N628 320 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 MRPS18BQ9Y676 258 aaKnown RBP11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 C11orf94C9JXX5 98 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ATP5J2P56134 94 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 LDLRAD3Q86YD5 345 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 RASL10BQ96S79 203 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 HIST1H4GQ99525 98 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 AP4M1O00189 453 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 COL9A1P20849 921 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 CDKN2AP42771 156 aaKnown RBP11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 DHRS2Q13268 280 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 PIGYQ3MUY2 71 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 RNF7Q9UBF6 113 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 TCF20Q9UGU0 1960 aaKnown RBP11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 TRBV7-9A0A0J9YWB2 115 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 TTC9CQ8N5M4 171 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 LHFPL5Q8TAF8 219 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 SYT11Q9BT88 431 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 C9orf170A2RU37 121 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 CHST1O43916 411 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 MAS1LP35410 378 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 NPBWR2P48146 333 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 COMPP49747 757 aaPredicted RBP11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 CLDN20P56880 219 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 DNLZQ5SXM8 178 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ARRDC1Q8N5I2 433 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 KLK15Q9H2R5 256 aa11.63□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 BGLAPP02818 100 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 SLC23A3Q6PIS1 610 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 BPIFA4PQ86YQ2 179 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 TMEM251Q8N6I4 163 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 OR1L6Q8NGR2 347 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 NRTNQ99748 197 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 IGSF23A1L1A6 192 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 RAC3P60763 192 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ELOBQ15370 118 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 KDM3BQ7LBC6 1761 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 IGHV3-35A0A0C4DH35 117 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 A0A1B0GTL3 188 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 DLX6P56179 175 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 FAM74A4Q5TZK3 123 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 MAP6Q96JE9 813 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 TRDCB7Z8K6 153 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 NUTF2P61970 127 aaKnown RBP11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 DLK1P80370 383 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 SUMO4Q6EEV6 95 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 HCP5Q6MZN7 132 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ZBTB34Q8NCN2 500 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 KCNK17Q96T54 332 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 SIGLEC7Q9Y286 467 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 C4AP0C0L4 1744 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 CT62P0C5K7 136 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 SSX8Q7RTT4 187 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 TP53I13Q8NBR0 393 aaPredicted RBP11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 TMEM38BQ9NVV0 291 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ZDHHC8Q9ULC8 765 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 PTBP1P26599 531 aaKnown RBP eCLIP11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 KIR3DL3Q8N743 410 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 LINC00615Q96LM1 132 aaPredicted RBP11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 TSPAN32Q96QS1 320 aa11.62□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 ZNF56Q15929 161 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 BCL2L10Q9HD36 194 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 PTP4A1Q93096 173 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 CCL19Q99731 98 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 PAM16Q9Y3D7 125 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 RAB29O14966 203 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 CCL3P10147 92 aa11.61□□□□□ -0.55
NPHP3-ACAD11-201ENST00000471702 B4GALNT1Q00973 533 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms