RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 BATF3Q9NR55 127 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 TMEM38BQ9NVV0 291 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 BABAM2Q9NXR7 383 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 CLEC2DQ9UHP7 191 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 CYB5R1Q9UHQ9 305 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 PURGQ9UJV8 347 aaKnown RBP3.71□□□□□ -1.82
CCDC39-202ENST00000471307 MEMO1Q9Y316 297 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 TIMM10BQ9Y5J6 103 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 DIDO1Q9BTC0 2240 aaKnown RBP3.71□□□□□ -1.82
CCDC39-202ENST00000471307 CFAP46Q8IYW2 2715 aa3.71□□□□□ -1.82
CCDC39-202ENST00000471307 A0A1B0GUH1 482 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 J3QLW9 94 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 CCL21O00585 134 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 TIMM8AO60220 97 aaPredicted RBP3.7□□□□□ -1.82
CCDC39-202ENST00000471307 PTHP01270 115 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 IGHV3-9P01782 118 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 APOC1P02654 83 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 ADRA2AP08913 450 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 MRPL3P09001 348 aaKnown RBP3.7□□□□□ -1.82
CCDC39-202ENST00000471307 IGHV1-2P23083 117 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 ARR3P36575 388 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 NUP62P37198 522 aaPredicted RBP3.7□□□□□ -1.82
CCDC39-202ENST00000471307 MAP2K4P45985 399 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 ALDH3B2P48448 385 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 HCCSP53701 268 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 OR12D2P58182 307 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 TAS2R43P59537 309 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 SEC61GP60059 68 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF85Q03923 595 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 ECH1Q13011 328 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 MLLT11Q13015 90 aaPredicted RBP3.7□□□□□ -1.82
CCDC39-202ENST00000471307 AQP6Q13520 282 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 TPBGQ13641 420 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 ENDOGQ14249 297 aaKnown RBP3.7□□□□□ -1.82
CCDC39-202ENST00000471307 ATXN7L3Q14CW9 347 aaPredicted RBP3.7□□□□□ -1.82
CCDC39-202ENST00000471307 NEDD8Q15843 81 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 GABRA6Q16445 453 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 SLC36A2Q495M3 483 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 PAN3Q58A45 887 aaKnown RBP3.7□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF684Q5T5D7 378 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 XAF1Q6GPH4 301 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF544Q6NX49 715 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 RPL22L1Q6P5R6 122 aaKnown RBP3.7□□□□□ -1.82
CCDC39-202ENST00000471307 SSX8Q7RTT4 187 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 SLC16A14Q7RTX9 510 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 DCXRQ7Z4W1 244 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 MOB3BQ86TA1 216 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 LUZP2Q86TE4 346 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 SKA3Q8IX90 412 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 GABRG1Q8N1C3 465 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 LRRC18Q8N456 261 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 C17orf78Q8N4C9 275 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 RPRMLQ8N4K4 120 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF433Q8N7K0 673 aaPredicted RBP3.7□□□□□ -1.82
CCDC39-202ENST00000471307 RNF133Q8WVZ7 376 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 TSEN15Q8WW01 171 aaKnown RBP3.7□□□□□ -1.82
CCDC39-202ENST00000471307 OR8B4Q96RC9 309 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 TBX5Q99593 518 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 MGLLQ99685 303 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 CITED1Q99966 193 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 MROQ9BYG7 248 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 CXXC4Q9H2H0 198 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 NIPAL2Q9H841 368 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 TAS2R16Q9NYV7 291 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 ATPIF1Q9UII2 106 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 FBXL3Q9UKT7 428 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 COPS3Q9UNS2 423 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 POLR1DQ9Y2S0 133 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 LSM2Q9Y333 95 aaKnown RBP3.7□□□□□ -1.82
CCDC39-202ENST00000471307 LHFPL6Q9Y693 200 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 ZFYVE26Q68DK2 2539 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 HIVEP3Q5T1R4 2406 aa3.7□□□□□ -1.82
CCDC39-202ENST00000471307 CIB4A0PJX0 185 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 OR6C6A6NF89 314 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF878C9JN71 531 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 CCRL2O00421 344 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 RER1O15258 196 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 SGCEO43556 437 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 DUSP14O95147 198 aaKnown RBP3.69□□□□□ -1.82
CCDC39-202ENST00000471307 UBL3O95164 117 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 MMP7P09237 267 aaPredicted RBP3.69□□□□□ -1.82
CCDC39-202ENST00000471307 H2BFMP0C1H6 154 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 COX5BP10606 129 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 ZNF32P17041 273 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 PSMB1P20618 241 aaKnown RBP3.69□□□□□ -1.82
CCDC39-202ENST00000471307 COX5AP20674 150 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 PSMA1P25786 263 aaKnown RBP3.69□□□□□ -1.82
CCDC39-202ENST00000471307 PSMB9P28065 219 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 RPS27P42677 84 aaKnown RBP3.69□□□□□ -1.82
CCDC39-202ENST00000471307 TGM4P49221 684 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 RGS6P49758 472 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 UBE2NP61088 152 aaKnown RBP3.69□□□□□ -1.82
CCDC39-202ENST00000471307 GRB2P62993 217 aaKnown RBP3.69□□□□□ -1.82
CCDC39-202ENST00000471307 PSG4Q00888 419 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 SCRN3Q0VDG4 424 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 RAB35Q15286 201 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 TRAM1Q15629 374 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 SLC25A35Q3KQZ1 300 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 TP53I3Q53FA7 332 aa3.69□□□□□ -1.82
CCDC39-202ENST00000471307 OR2G6Q5TZ20 316 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms