RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 MUL1Q969V5 352 aa9.52□□□□□ -0.89
HDAC3-204ENST00000469207 ETAA1Q9NY74 926 aa9.52□□□□□ -0.89
HDAC3-204ENST00000469207 RPL36Q9Y3U8 105 aaKnown RBP9.52□□□□□ -0.89
HDAC3-204ENST00000469207 PEX16Q9Y5Y5 336 aa9.52□□□□□ -0.89
HDAC3-204ENST00000469207 SMAD5-AS1Q9Y6J3 95 aa9.52□□□□□ -0.89
HDAC3-204ENST00000469207 MCRIP1C9JLW8 97 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 ATP6V0E1O15342 81 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 OGG1O15527 345 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 SPINT2O43291 252 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 WBP4O75554 376 aaKnown RBP9.51□□□□□ -0.89
HDAC3-204ENST00000469207 ATP5HO75947 161 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 CHATP28329 748 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 RAB9AP51151 201 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 ZNF137PP52743 207 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 SLURP1P55000 103 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 ACTBP60709 375 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 PPP3R1P63098 170 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 LSAMPQ13449 338 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 RIPK1Q13546 671 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 MORN2Q502X0 79 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 SIGIRRQ6IA17 410 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 RAB12Q6IQ22 244 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 TMEM65Q6PI78 240 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 GLIPR1L1Q6UWM5 242 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 LINC00596Q86U02 117 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 STX19Q8N4C7 294 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 OR8H1Q8NGG4 311 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 GHSRQ92847 366 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 DLX4Q92988 240 aaPredicted RBP9.51□□□□□ -0.89
HDAC3-204ENST00000469207 UBE2E2Q96LR5 201 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 RCHY1Q96PM5 261 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 MYCBPQ99417 103 aaPredicted RBP9.51□□□□□ -0.89
HDAC3-204ENST00000469207 ANKRD60Q9BZ19 345 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 TAF9BQ9HBM6 251 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 FGF20Q9NP95 211 aaPredicted RBP9.51□□□□□ -0.89
HDAC3-204ENST00000469207 OR2S2Q9NQN1 319 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 PARP11Q9NR21 331 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 RCC2Q9P258 522 aaKnown RBP9.51□□□□□ -0.89
HDAC3-204ENST00000469207 FBXO7Q9Y3I1 522 aa9.51□□□□□ -0.89
HDAC3-204ENST00000469207 IGHV7-81A0A0B4J1V7 117 aa9.5□□□□□ -0.89
HDAC3-204ENST00000469207 SOX15O60248 233 aa9.5□□□□□ -0.89
HDAC3-204ENST00000469207 IGLV1-40P01703 118 aa9.5□□□□□ -0.89
HDAC3-204ENST00000469207 MAS1P04201 325 aa9.5□□□□□ -0.89
HDAC3-204ENST00000469207 SPNP16150 400 aa9.5□□□□□ -0.89
HDAC3-204ENST00000469207 PPP1CCP36873 323 aaKnown RBP9.5□□□□□ -0.89
HDAC3-204ENST00000469207 OR3A3P47888 321 aa9.5□□□□□ -0.89
HDAC3-204ENST00000469207 RPS11P62280 158 aaKnown RBP eCLIP9.5□□□□□ -0.89
HDAC3-204ENST00000469207 ZNF616Q08AN1 781 aa9.5□□□□□ -0.89
HDAC3-204ENST00000469207 CCDC58Q4VC31 144 aa9.5□□□□□ -0.89
HDAC3-204ENST00000469207 MUC7Q8TAX7 377 aa9.5□□□□□ -0.89
HDAC3-204ENST00000469207 MRPL20Q9BYC9 149 aaKnown RBP9.5□□□□□ -0.89
HDAC3-204ENST00000469207 SELENOIQ9C0D9 397 aa9.5□□□□□ -0.89
HDAC3-204ENST00000469207 OR51J1Q9H342 316 aa9.5□□□□□ -0.89
HDAC3-204ENST00000469207 PAK1IP1Q9NWT1 392 aaPredicted RBP9.5□□□□□ -0.89
HDAC3-204ENST00000469207 BABAM2Q9NXR7 383 aa9.5□□□□□ -0.89
HDAC3-204ENST00000469207 VSIG4Q9Y279 399 aa9.5□□□□□ -0.89
HDAC3-204ENST00000469207 MRPS28Q9Y2Q9 187 aaKnown RBP9.5□□□□□ -0.89
HDAC3-204ENST00000469207 DNAH1Q9P2D7 4330 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 STAB2Q8WWQ8 2551 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 TRBV5-5A0A0J9YX44 114 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 PNMA8CA0A1B0GUJ8 204 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 FAM90A10PA6NDY2 464 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 TRIM64CA6NLI5 447 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 FCN1O00602 326 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 OVOL1O14753 267 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 LANCL1O43813 399 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 ZNF780AO75290 641 aaPredicted RBP9.49□□□□□ -0.89
HDAC3-204ENST00000469207 SAP30O75446 220 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 BAG2O95816 211 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 OR8U8P0C7N1 319 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 FRMD6-AS1P0C7T7 363 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 BLVRBP30043 206 aaPredicted RBP9.49□□□□□ -0.89
HDAC3-204ENST00000469207 NDPQ00604 133 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 DOC2BQ14184 412 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 Q3ZCU0 254 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 LIN54Q6MZP7 749 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 HAPLN4Q86UW8 402 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 GAPTQ8N292 157 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 JAGN1Q8N5M9 183 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 NABP2Q9BQ15 211 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 ISYNA1Q9NPH2 558 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 SORL1Q92673 2214 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 HYDINQ4G0P3 5121 aa9.49□□□□□ -0.89
HDAC3-204ENST00000469207 IGHV4OR15-8A0A075B7B6 117 aa9.48□□□□□ -0.89
HDAC3-204ENST00000469207 A0A087WW49 117 aa9.48□□□□□ -0.89
HDAC3-204ENST00000469207 TRAV41A0A0B4J266 112 aa9.48□□□□□ -0.89
HDAC3-204ENST00000469207 TXNL1O43396 289 aa9.48□□□□□ -0.89
HDAC3-204ENST00000469207 GPX5O75715 221 aa9.48□□□□□ -0.89
HDAC3-204ENST00000469207 ECSCRQ19T08 205 aa9.48□□□□□ -0.89
HDAC3-204ENST00000469207 C6orf183Q5T699 404 aa9.48□□□□□ -0.89
HDAC3-204ENST00000469207 FAM27D1Q5T7N8 215 aa9.48□□□□□ -0.89
HDAC3-204ENST00000469207 DMKNQ6E0U4 476 aaPredicted RBP9.48□□□□□ -0.89
HDAC3-204ENST00000469207 TMPRSS11AQ6ZMR5 421 aa9.48□□□□□ -0.89
HDAC3-204ENST00000469207 ZNF429Q86V71 674 aa9.48□□□□□ -0.89
HDAC3-204ENST00000469207 MINDY2Q8NBR6 621 aa9.48□□□□□ -0.89
HDAC3-204ENST00000469207 MRPL30Q8TCC3 161 aaKnown RBP9.48□□□□□ -0.89
HDAC3-204ENST00000469207 FAM46BQ96A09 425 aa9.48□□□□□ -0.89
HDAC3-204ENST00000469207 SMIM19Q96E16 107 aa9.48□□□□□ -0.89
HDAC3-204ENST00000469207 PGLYRP3Q96LB9 341 aa9.48□□□□□ -0.89
HDAC3-204ENST00000469207 OR14A2Q96R54 314 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms