RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.13■□□□□ 0.17
NPHP4-206ENST00000468253 GNG12Q9UBI6 72 aa16.13■□□□□ 0.17
NPHP4-206ENST00000468253 JPT1Q9UK76 154 aa16.13■□□□□ 0.17
NPHP4-206ENST00000468253 A6NDX4 124 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 YPEL1O60688 119 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 MNDAP41218 407 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 ALDH3B2P48448 385 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 RAB7AP51149 207 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 RAB13P51153 203 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 RELBQ01201 579 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 SRSF7Q16629 238 aaKnown RBP eCLIP16.12■□□□□ 0.17
NPHP4-206ENST00000468253 MOGAT2Q3SYC2 334 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 MORN2Q502X0 79 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 IDNKQ5T6J7 187 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 SLC25A48Q6ZT89 311 aaKnown RBP16.12■□□□□ 0.17
NPHP4-206ENST00000468253 ANKRD13BQ86YJ7 626 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 OR10X1Q8NGY0 326 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 RPEQ96AT9 228 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 YPEL2Q96QA6 119 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 C16orf95Q9H693 158 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 BEX1Q9HBH7 125 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 Q9N2K0 584 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 TCF19Q9Y242 345 aa16.12■□□□□ 0.17
NPHP4-206ENST00000468253 MFNGO00587 321 aa16.11■□□□□ 0.17
NPHP4-206ENST00000468253 RGS11O94810 467 aa16.11■□□□□ 0.17
NPHP4-206ENST00000468253 IGHV3-7P01780 117 aa16.11■□□□□ 0.17
NPHP4-206ENST00000468253 TFAP2AP05549 437 aa16.11■□□□□ 0.17
NPHP4-206ENST00000468253 CD3GP09693 182 aa16.11■□□□□ 0.17
NPHP4-206ENST00000468253 SNRPBP14678 240 aaKnown RBP16.11■□□□□ 0.17
NPHP4-206ENST00000468253 HIST1H1DP16402 221 aaKnown RBP16.11■□□□□ 0.17
NPHP4-206ENST00000468253 RAG2P55895 527 aa16.11■□□□□ 0.17
NPHP4-206ENST00000468253 CT45A1Q5HYN5 189 aa16.11■□□□□ 0.17
NPHP4-206ENST00000468253 DHRS7BQ6IAN0 325 aaPredicted RBP16.11■□□□□ 0.17
NPHP4-206ENST00000468253 OR8H3Q8N146 312 aa16.11■□□□□ 0.17
NPHP4-206ENST00000468253 PRR18Q8N4B5 295 aa16.11■□□□□ 0.17
NPHP4-206ENST00000468253 ZNF439Q8NDP4 499 aa16.11■□□□□ 0.17
NPHP4-206ENST00000468253 CT45A3Q8NHU0 189 aa16.11■□□□□ 0.17
NPHP4-206ENST00000468253 UBALD1Q8TB05 177 aa16.11■□□□□ 0.17
NPHP4-206ENST00000468253 ST6GALNAC6Q969X2 333 aa16.11■□□□□ 0.17
NPHP4-206ENST00000468253 SPATA2Q9UM82 520 aa16.11■□□□□ 0.17
NPHP4-206ENST00000468253 TENM1Q9UKZ4 2725 aa16.11■□□□□ 0.17
NPHP4-206ENST00000468253 ANK2Q01484 3957 aa16.11■□□□□ 0.17
NPHP4-206ENST00000468253 A0A0A6YYH2 397 aa16.1■□□□□ 0.17
NPHP4-206ENST00000468253 A6NJ64 397 aa16.1■□□□□ 0.17
NPHP4-206ENST00000468253 FAM90A9PA6NNJ1 464 aa16.1■□□□□ 0.17
NPHP4-206ENST00000468253 GAPDHP04406 335 aaKnown RBP16.1■□□□□ 0.17
NPHP4-206ENST00000468253 IL3RAP26951 378 aa16.1■□□□□ 0.17
NPHP4-206ENST00000468253 GNG10P50151 68 aa16.1■□□□□ 0.17
NPHP4-206ENST00000468253 ZNF134P52741 427 aa16.1■□□□□ 0.17
NPHP4-206ENST00000468253 ZNF137PP52743 207 aa16.1■□□□□ 0.17
NPHP4-206ENST00000468253 LSM3P62310 102 aaKnown RBP16.1■□□□□ 0.17
NPHP4-206ENST00000468253 MRPS15P82914 257 aaKnown RBP16.1■□□□□ 0.17
NPHP4-206ENST00000468253 LY6EQ16553 131 aa16.1■□□□□ 0.17
NPHP4-206ENST00000468253 CDNFQ49AH0 187 aa16.1■□□□□ 0.17
NPHP4-206ENST00000468253 Q6ZPA2 131 aa16.1■□□□□ 0.17
NPHP4-206ENST00000468253 IGHV3-43A0A0B4J1X8 118 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 CLPSL1A2RUU4 121 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 TRDCB7Z8K6 153 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 ITGB1BP1O14713 200 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 IGHV3-43DP0DP04 118 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 GNB3P16520 340 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 KIR2DS4P43632 304 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 ZNF816Q0VGE8 651 aaPredicted RBP16.09■□□□□ 0.17
NPHP4-206ENST00000468253 PLA1AQ53H76 456 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 OLFML2AQ68BL7 652 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 CCBE1Q6UXH8 406 aaPredicted RBP16.09■□□□□ 0.17
NPHP4-206ENST00000468253 C16orf82Q7Z2V1 217 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 C3orf56Q8N813 242 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 OR52L2PQ8NGH6 319 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 LGALS14Q8TCE9 139 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 TOMM40LQ969M1 308 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 SLC25A46Q96AG3 418 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 KCTD12Q96CX2 325 aaKnown RBP16.09■□□□□ 0.17
NPHP4-206ENST00000468253 HDHD3Q9BSH5 251 aaPredicted RBP16.09■□□□□ 0.17
NPHP4-206ENST00000468253 ZNF747Q9BV97 191 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 GHITMQ9H3K2 345 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 RANBP3Q9H6Z4 567 aaPredicted RBP16.09■□□□□ 0.17
NPHP4-206ENST00000468253 RHBDL2Q9NX52 303 aa16.09■□□□□ 0.17
NPHP4-206ENST00000468253 A0A1W2PPE3 182 aa16.08■□□□□ 0.16
NPHP4-206ENST00000468253 DIRAS3O95661 229 aa16.08■□□□□ 0.16
NPHP4-206ENST00000468253 GSTP1P09211 210 aaKnown RBP16.08■□□□□ 0.16
NPHP4-206ENST00000468253 FAM106CPP0CH98 169 aa16.08■□□□□ 0.16
NPHP4-206ENST00000468253 TGFBR1P36897 503 aa16.08■□□□□ 0.16
NPHP4-206ENST00000468253 PITPNAQ00169 270 aa16.08■□□□□ 0.16
NPHP4-206ENST00000468253 FAM53AQ6NSI3 398 aaPredicted RBP16.08■□□□□ 0.16
NPHP4-206ENST00000468253 Q6ZS49 121 aa16.08■□□□□ 0.16
NPHP4-206ENST00000468253 Q6ZSV7 163 aa16.08■□□□□ 0.16
NPHP4-206ENST00000468253 SETD6Q8TBK2 473 aa16.08■□□□□ 0.16
NPHP4-206ENST00000468253 HLA-DRB3P79483 266 aa16.07■□□□□ 0.16
NPHP4-206ENST00000468253 HABP2Q14520 560 aaPredicted RBP16.07■□□□□ 0.16
NPHP4-206ENST00000468253 PNLIPRP3Q17RR3 467 aa16.07■□□□□ 0.16
NPHP4-206ENST00000468253 HACD4Q5VWC8 232 aa16.07■□□□□ 0.16
NPHP4-206ENST00000468253 GPR141Q7Z602 305 aa16.07■□□□□ 0.16
NPHP4-206ENST00000468253 C5orf24Q7Z6I8 188 aa16.07■□□□□ 0.16
NPHP4-206ENST00000468253 OR10V1Q8NGI7 309 aa16.07■□□□□ 0.16
NPHP4-206ENST00000468253 OR5H6Q8NGV6 325 aa16.07■□□□□ 0.16
NPHP4-206ENST00000468253 LINC01006Q8NI28 216 aa16.07■□□□□ 0.16
NPHP4-206ENST00000468253 PHF21AQ96BD5 680 aa16.07■□□□□ 0.16
NPHP4-206ENST00000468253 NPFFR1Q9GZQ6 430 aa16.07■□□□□ 0.16
NPHP4-206ENST00000468253 ABCG5Q9H222 651 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms