RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 MND1Q9BWT6 205 aa0.61□□□□□ -2.31
CHMP2B-202ENST00000466696 DDX18Q9NVP1 670 aaKnown RBP0.61□□□□□ -2.31
CHMP2B-202ENST00000466696 BABAM2Q9NXR7 383 aa0.61□□□□□ -2.31
CHMP2B-202ENST00000466696 RTTNQ86VV8 2226 aa0.61□□□□□ -2.31
CHMP2B-202ENST00000466696 KDM5BQ9UGL1 1544 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 GOLGA6L7A0A1B0GV03 622 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 DHRS12A0PJE2 317 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 C9J4A7 227 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 H3BPC8 53 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 hCG_2039718K7EN88 272 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 UBFD1O14562 309 aaKnown RBP0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 HMMRO75330 724 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 IGHV3-30-3P0DP02 117 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 AKR1C4P17516 323 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 BGNP21810 368 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 PRB3Q04118 309 aaPredicted RBP0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 CAVIN4Q5BKX8 364 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 FAM201AQ5SY85 155 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 RASL11AQ6T310 242 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 Q6ZTI0 123 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 SYS1Q8N2H4 156 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 SUN5Q8TC36 379 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 PGLYRP3Q96LB9 341 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 RETNLBQ9BQ08 111 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 PRSS27Q9BQR3 290 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 UPK3BQ9BT76 320 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 ZNF426Q9BUY5 554 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 NCOR1P1Q9H4R4 102 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 C16orf95Q9H693 158 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 XKR8Q9H6D3 395 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 C11orf49Q9H6J7 331 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 TMBIM4Q9HC24 238 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 PRO2289Q9P1D8 64 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 ALG5Q9Y673 324 aa0.6□□□□□ -2.31
CHMP2B-202ENST00000466696 ZFHX2Q9C0A1 2572 aaPredicted RBP0.59□□□□□ -2.31
CHMP2B-202ENST00000466696 MGAT4DA6NG13 374 aa0.59□□□□□ -2.31
CHMP2B-202ENST00000466696 C11orf86A6NJI1 115 aa0.59□□□□□ -2.31
CHMP2B-202ENST00000466696 VAPBO95292 243 aa0.59□□□□□ -2.31
CHMP2B-202ENST00000466696 CRYGCP07315 174 aa0.59□□□□□ -2.31
CHMP2B-202ENST00000466696 ATP5J2P56134 94 aa0.59□□□□□ -2.31
CHMP2B-202ENST00000466696 ERHP84090 104 aaKnown RBP0.59□□□□□ -2.31
CHMP2B-202ENST00000466696 PDGFRLQ15198 375 aa0.59□□□□□ -2.31
CHMP2B-202ENST00000466696 ASCC1Q8N9N2 400 aaKnown RBP0.59□□□□□ -2.31
CHMP2B-202ENST00000466696 OR5D18Q8NGL1 313 aa0.59□□□□□ -2.31
CHMP2B-202ENST00000466696 OR13C9Q8NGT0 318 aa0.59□□□□□ -2.31
CHMP2B-202ENST00000466696 LHFPL5Q8TAF8 219 aa0.59□□□□□ -2.31
CHMP2B-202ENST00000466696 LGALS14Q8TCE9 139 aa0.59□□□□□ -2.31
CHMP2B-202ENST00000466696 CDCA4Q9BXL8 241 aa0.59□□□□□ -2.31
CHMP2B-202ENST00000466696 TAS2R13Q9NYV9 303 aa0.59□□□□□ -2.31
CHMP2B-202ENST00000466696 MRPS16Q9Y3D3 137 aaKnown RBP0.59□□□□□ -2.31
CHMP2B-202ENST00000466696 SOX21Q9Y651 276 aaPredicted RBP0.59□□□□□ -2.31
CHMP2B-202ENST00000466696 ZNF469Q96JG9 3925 aaPredicted RBP0.59□□□□□ -2.32
CHMP2B-202ENST00000466696 SLX4Q8IY92 1834 aa0.59□□□□□ -2.32
CHMP2B-202ENST00000466696 IGKV2-40A0A087WW87 121 aaPredicted RBP0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 GOLGA8IPA6NC78 632 aa0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 C2orf74A8MZ97 194 aa0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 C8orf87E5RJ46 101 aa0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 GNRH2O43555 120 aa0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 CDK14O94921 469 aa0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 IGKV2D-40P01614 121 aaPredicted RBP0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 ESDP10768 282 aa0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 ZNF90Q03938 601 aa0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 RELAQ04206 551 aa0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 PAFAH1B3Q15102 231 aaKnown RBP0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 SSX6Q7RTT6 188 aa0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 OR11L1Q8NGX0 322 aa0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 SPACA4Q8TDM5 124 aa0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 FGF13Q92913 245 aa0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 ZNF471Q9BX82 626 aaPredicted RBP0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 RMND1Q9NWS8 449 aa0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 STMN3Q9NZ72 180 aa0.58□□□□□ -2.32
CHMP2B-202ENST00000466696 KIF27Q86VH2 1401 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 GSTTP1A0A1W2PQM5 241 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 GRIFINA4D1Z8 144 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 TMEM235A6NFC5 223 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 A8MUN3 132 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 H3BSA7 217 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 SHOX2O60902 331 aaPredicted RBP0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 ZMPSTE24O75844 475 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 ZNF705DP0CH99 300 aaPredicted RBP0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 ZNF705BP0CI00 300 aaPredicted RBP0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 PRB4P10163 310 aaPredicted RBP0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 CTSEP14091 401 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 UGT2B10P36537 528 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 ACTR1BP42025 376 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 SULT1A2P50226 295 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 RPL14P50914 215 aaKnown RBP0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 TSPAN5P62079 268 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 VSNL1P62760 191 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 DYNLL1P63167 89 aaKnown RBP0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 HENMT1Q5T8I9 393 aaKnown RBP0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 NAA40Q86UY6 237 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 ZNF321PQ8N8H1 164 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 ACBD4Q8NC06 268 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 RNF133Q8WVZ7 376 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 MED18Q9BUE0 208 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 C1QTNF6Q9BXI9 259 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 METTL17Q9H7H0 456 aaPredicted RBP0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 SNX12Q9UMY4 172 aa0.57□□□□□ -2.32
CHMP2B-202ENST00000466696 BZW2Q9Y6E2 419 aaKnown RBP0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms