RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 GTF2BQ00403 316 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 MED21Q13503 144 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 FAM19A3Q7Z5A8 133 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 VN1R4Q7Z5H5 301 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 SLC13A5Q86YT5 568 aaPredicted RBP2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 OR5P3Q8WZ94 311 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 TMEM56Q96MV1 263 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 HIGD2AQ9BW72 106 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 ARL6Q9H0F7 186 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 PLEKHJ1Q9NW61 149 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 OR5V1Q9UGF6 321 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 RPUSD1Q9UJJ7 312 aaKnown RBP2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 LINC00588Q9Y4M8 146 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 PHLDA3Q9Y5J5 127 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 U3KQK5 164 aa2.11□□□□□ -2.07
CDC42BPA-211ENST00000466538 PRR14LQ5THK1 2151 aa2.1□□□□□ -2.07
CDC42BPA-211ENST00000466538 A6NED7 52 aa2.1□□□□□ -2.07
CDC42BPA-211ENST00000466538 DENRO43583 198 aaKnown RBP2.1□□□□□ -2.07
CDC42BPA-211ENST00000466538 MPZL2O60487 215 aa2.1□□□□□ -2.07
CDC42BPA-211ENST00000466538 CDS2O95674 445 aa2.1□□□□□ -2.07
CDC42BPA-211ENST00000466538 COX5BP10606 129 aa2.1□□□□□ -2.07
CDC42BPA-211ENST00000466538 ZNHIT3Q15649 155 aaPredicted RBP2.1□□□□□ -2.07
CDC42BPA-211ENST00000466538 C10orf91Q5T1B1 145 aa2.1□□□□□ -2.07
CDC42BPA-211ENST00000466538 OR5D18Q8NGL1 313 aa2.1□□□□□ -2.07
CDC42BPA-211ENST00000466538 OR9I1Q8NGQ6 314 aa2.1□□□□□ -2.07
CDC42BPA-211ENST00000466538 OR4A5Q8NH83 315 aa2.1□□□□□ -2.07
CDC42BPA-211ENST00000466538 TAMM41Q96BW9 452 aa2.1□□□□□ -2.07
CDC42BPA-211ENST00000466538 CHST5Q9GZS9 411 aa2.1□□□□□ -2.07
CDC42BPA-211ENST00000466538 UBQLN4Q9NRR5 601 aa2.1□□□□□ -2.07
CDC42BPA-211ENST00000466538 ZNF230Q9UIE0 474 aaPredicted RBP2.1□□□□□ -2.07
CDC42BPA-211ENST00000466538 GOLGA8KD6RF30 607 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 GOLGA8MH3BSY2 632 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 OR5F1O95221 314 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 ORM1P02763 201 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 CTSEP14091 401 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 PVALBP20472 110 aaPredicted RBP2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 GADD45AP24522 165 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 B2MP61769 119 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 APOFQ13790 326 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 IMPG1Q17R60 797 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 CLEC12BQ2HXU8 276 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 SLC36A2Q495M3 483 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 TMEM31Q5JXX7 168 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 SMARCD3Q6STE5 483 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 DRAM2Q6UX65 266 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 SPNS3Q6ZMD2 512 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 ZBTB8OSQ8IWT0 167 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 HS3ST5Q8IZT8 346 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 OR11G2Q8NGC1 345 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 OR52E4Q8NGH9 312 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 OR5K1Q8NHB7 308 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 RNF133Q8WVZ7 376 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 HIST1H2BAQ96A08 127 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 RAD51AP1Q96B01 352 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 SMIM12Q96EX1 92 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 CHMP6Q96FZ7 201 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 C9orf16Q9BUW7 83 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 TSSK6Q9BXA6 273 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 KCNIP2Q9NS61 270 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 TMEM216Q9P0N5 145 aa2.09□□□□□ -2.07
CDC42BPA-211ENST00000466538 MYO5BQ9ULV0 1848 aa2.09□□□□□ -2.08
CDC42BPA-211ENST00000466538 NOTCH2Q04721 2471 aa2.09□□□□□ -2.08
CDC42BPA-211ENST00000466538 IGLV10-54A0A075B6I4 117 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 H3BSA7 217 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 M0QYV0 167 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 LECT2O14960 151 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 EEF1E1O43324 174 aaKnown RBP2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 ATP5HO75947 161 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 FBP1P09467 338 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 ZNF7P17097 686 aaPredicted RBP2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 F8A1P23610 371 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 CDKN2CP42773 168 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 MAGEA2P43356 314 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 ERVS71-1P61550 626 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 MEF2BQ02080 365 aaPredicted RBP2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 TNFRSF9Q07011 255 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 CST6Q15828 149 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 HENMT1Q5T8I9 393 aaKnown RBP2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 SYPL2Q5VXT5 272 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 FAM45BPQ6NSW5 357 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 TCF23Q7RTU1 214 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 LRP11Q86VZ4 500 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 LYPD6Q86Y78 171 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 LFNGQ8NES3 379 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 OR8K1Q8NGG5 319 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 OR11L1Q8NGX0 322 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 MUC7Q8TAX7 377 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 ZNF286AQ9HBT8 521 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 SLC23A2Q9UGH3 650 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 MTCH2Q9Y6C9 303 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 CLUHO75153 1309 aa2.08□□□□□ -2.08
CDC42BPA-211ENST00000466538 YLPM1P49750 1951 aaKnown RBP2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 NUP205Q92621 2012 aa2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 B4DEV8 164 aa2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 FTCDNL1E5RQL4 147 aa2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 E7EQL1 145 aa2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 F5H5T6 163 aa2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 ATP8B1O43520 1251 aa2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 PSMA1P25786 263 aaKnown RBP2.07□□□□□ -2.08
CDC42BPA-211ENST00000466538 PPP1R2P41236 205 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms