RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 LY6G6CO95867 125 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 IGHG4P01861 327 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 VDAC1P21796 283 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 BDKRB2P30411 391 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 SOX6P35712 828 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 ETV1P50549 477 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 ZNF134P52741 427 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 MPV17LQ2QL34 196 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 SLC22A6Q4U2R8 563 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 CCDC58Q4VC31 144 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 CT45A1Q5HYN5 189 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 ZFP1Q6P2D0 407 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 SLC25A48Q6ZT89 311 aaKnown RBP7.56□□□□□ -1.2
USP39-212ENST00000465514 STX19Q8N4C7 294 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 FAM71E2Q8N5Q1 922 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 ZNF439Q8NDP4 499 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 OR8H1Q8NGG4 311 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 CT45A3Q8NHU0 189 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 C4orf3Q8WVX3 66 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 APH1BQ8WW43 257 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 SLC29A1Q99808 456 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 FGF20Q9NP95 211 aaPredicted RBP7.56□□□□□ -1.2
USP39-212ENST00000465514 SIRT4Q9Y6E7 314 aaPredicted RBP7.56□□□□□ -1.2
USP39-212ENST00000465514 LOC100130705A0A1B0GUX0 176 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 C12orf77C9JDV5 145 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 MCRIP1C9JLW8 97 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 OGG1O15527 345 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 SPINT2O43291 252 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 TXNL1O43396 289 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 ZNF780AO75290 641 aaPredicted RBP7.55□□□□□ -1.2
USP39-212ENST00000465514 IGF1P05019 195 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 GTF2F2P13984 249 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 IGFBP3P17936 291 aaPredicted RBP7.55□□□□□ -1.2
USP39-212ENST00000465514 PSMB8P28062 276 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 VHLP40337 213 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 ZNF137PP52743 207 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 SMN1Q16637 294 aaKnown RBP7.55□□□□□ -1.2
USP39-212ENST00000465514 Q3ZCU0 254 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 SYT6Q5T7P8 510 aaPredicted RBP7.55□□□□□ -1.2
USP39-212ENST00000465514 OR2G6Q5TZ20 316 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 TMPRSS11AQ6ZMR5 421 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 PRR18Q8N4B5 295 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 OR11H1Q8NG94 326 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 OR10V1Q8NGI7 309 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 OR13C5Q8NGS8 318 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 OR4K15Q8NH41 348 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 OR1L1Q8NH94 360 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 KCTD7Q96MP8 289 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 ZNF184Q99676 751 aaPredicted RBP7.55□□□□□ -1.2
USP39-212ENST00000465514 C9orf16Q9BUW7 83 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 GNG12Q9UBI6 72 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 TRAPPC2LQ9UL33 140 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 PKHD1P08F94 4074 aa7.55□□□□□ -1.2
USP39-212ENST00000465514 MAGEA13PA6NCF6 341 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 TRIM64CA6NLI5 447 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 WBP4O75554 376 aaKnown RBP7.54□□□□□ -1.2
USP39-212ENST00000465514 HBZP02008 142 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 SLC2A2P11168 524 aaPredicted RBP7.54□□□□□ -1.2
USP39-212ENST00000465514 RIPK1Q13546 671 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 FHL3Q13643 280 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 GPR176Q14439 515 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 C6orf183Q5T699 404 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 FAM27D1Q5T7N8 215 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 RAB12Q6IQ22 244 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 TMEM65Q6PI78 240 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 GHSRQ92847 366 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 MUL1Q969V5 352 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 KLK15Q9H2R5 256 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 GNB4Q9HAV0 340 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 SPACA1Q9HBV2 294 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 RAB9BQ9NP90 201 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 BABAM2Q9NXR7 383 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 ETAA1Q9NY74 926 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 RCC2Q9P258 522 aaKnown RBP7.54□□□□□ -1.2
USP39-212ENST00000465514 ZNF107Q9UII5 783 aaPredicted RBP7.54□□□□□ -1.2
USP39-212ENST00000465514 ZNF580Q9UK33 172 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 WSB1Q9Y6I7 421 aa7.54□□□□□ -1.2
USP39-212ENST00000465514 TRAV8-7A0A075B6U6 113 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 TRBV5-5A0A0J9YX44 114 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 G3V318 75 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 I3L521 148 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 LANCL1O43813 399 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 GPX5O75715 221 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 LALBAP00709 142 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 OR5H8P0DN80 308 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 RCC1P18754 421 aaPredicted RBP7.53□□□□□ -1.2
USP39-212ENST00000465514 DCKP27707 260 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 ADARB1P78563 741 aaKnown RBP7.53□□□□□ -1.2
USP39-212ENST00000465514 LSAMPQ13449 338 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 KIAA0141Q14154 515 aaPredicted RBP7.53□□□□□ -1.2
USP39-212ENST00000465514 MMDQ15546 238 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 TMEM30BQ3MIR4 351 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 ASPHD1Q5U4P2 390 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 STEAP3Q658P3 488 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 GLIPR1L1Q6UWM5 242 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 GAPTQ8N292 157 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 ZNF491Q8N8L2 437 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 OR1N2Q8NGR9 330 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 IL17DQ8TAD2 202 aa7.53□□□□□ -1.2
USP39-212ENST00000465514 MYOZ3Q8TDC0 251 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms