RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 TXNL4BQ9NX01 149 aaKnown RBP10.47□□□□□ -0.73
COL28A1-206ENST00000465339 RAB22AQ9UL26 194 aa10.47□□□□□ -0.73
COL28A1-206ENST00000465339 A0A0A6YYD4 124 aa10.46□□□□□ -0.73
COL28A1-206ENST00000465339 SHISA3A0PJX4 238 aa10.46□□□□□ -0.73
COL28A1-206ENST00000465339 LDLRAD4O15165 306 aa10.46□□□□□ -0.73
COL28A1-206ENST00000465339 SOCS1O15524 211 aa10.46□□□□□ -0.73
COL28A1-206ENST00000465339 FAM106CPP0CH98 169 aa10.46□□□□□ -0.73
COL28A1-206ENST00000465339 IL3RAP26951 378 aa10.46□□□□□ -0.73
COL28A1-206ENST00000465339 HTD2P86397 168 aa10.46□□□□□ -0.73
COL28A1-206ENST00000465339 STEAP3Q658P3 488 aa10.46□□□□□ -0.73
COL28A1-206ENST00000465339 Q6ZTK2 550 aa10.46□□□□□ -0.73
COL28A1-206ENST00000465339 TMEM219Q86XT9 240 aa10.46□□□□□ -0.73
COL28A1-206ENST00000465339 OR8H3Q8N146 312 aa10.46□□□□□ -0.73
COL28A1-206ENST00000465339 PRR18Q8N4B5 295 aa10.46□□□□□ -0.73
COL28A1-206ENST00000465339 UBALD1Q8TB05 177 aa10.46□□□□□ -0.73
COL28A1-206ENST00000465339 CITED1Q99966 193 aa10.46□□□□□ -0.73
COL28A1-206ENST00000465339 ZNF696Q9H7X3 374 aa10.46□□□□□ -0.73
COL28A1-206ENST00000465339 LIN7BQ9HAP6 207 aa10.46□□□□□ -0.73
COL28A1-206ENST00000465339 GNG12Q9UBI6 72 aa10.46□□□□□ -0.73
COL28A1-206ENST00000465339 hCG_2014768A0A024R1R8 64 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 IGHV3-43A0A0B4J1X8 118 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 TMEM272A0A1B0GTI8 110 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 A0A1W2PPE3 182 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 FAM90A9PA6NNJ1 464 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 FOXI3A8MTJ6 420 aaPredicted RBP10.45□□□□□ -0.74
COL28A1-206ENST00000465339 TNFAIP8O95379 198 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 NAPSAO96009 420 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 GAPDHP04406 335 aaKnown RBP10.45□□□□□ -0.74
COL28A1-206ENST00000465339 IGHV3-43DP0DP04 118 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 RAB6AP20340 208 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 VEGFCP49767 419 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 EFNB2P52799 333 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 TMEM50BP56557 158 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 OR10A3P58181 314 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 ZNF816Q0VGE8 651 aaPredicted RBP10.45□□□□□ -0.74
COL28A1-206ENST00000465339 NEDD8Q15843 81 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 Q8N2B8 174 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 OR1L1Q8NH94 360 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 CAPSLQ8WWF8 208 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 PTX4Q96A99 478 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 GALMQ96C23 342 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 CHMP1AQ9HD42 196 aaPredicted RBP10.45□□□□□ -0.74
COL28A1-206ENST00000465339 OR2S2Q9NQN1 319 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 ABRACLQ9P1F3 81 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 MGAT4AQ9UM21 535 aa10.45□□□□□ -0.74
COL28A1-206ENST00000465339 A0A087WXM4 84 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 TRBV6-6A0A0A6YYG2 114 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 NOTOA8MTQ0 251 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 RGS11O94810 467 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 OR2F2O95006 317 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 LPLP06858 475 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 CD24P25063 80 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 KRTAP10-3P60369 221 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 MORN2Q502X0 79 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 LY6G6FQ5SQ64 297 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 ZNF880Q6PDB4 577 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 SLC25A48Q6ZT89 311 aaKnown RBP10.44□□□□□ -0.74
COL28A1-206ENST00000465339 MOB1BQ7L9L4 216 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 ZNF439Q8NDP4 499 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 TSPAN14Q8NG11 270 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 RHOVQ96L33 236 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 KCTD7Q96MP8 289 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 RBM14Q96PK6 669 aaKnown RBP10.44□□□□□ -0.74
COL28A1-206ENST00000465339 SLC25A33Q9BSK2 321 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 PECRQ9BY49 303 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 OR51E2Q9H255 320 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 ZNF702PQ9H963 129 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 VCX3AQ9NNX9 186 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 AK3Q9UIJ7 227 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 JPT1Q9UK76 154 aa10.44□□□□□ -0.74
COL28A1-206ENST00000465339 NBEAL1Q6ZS30 2694 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 A0A1W2PPI3 338 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 METTL21EPA6NDL7 271 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 M0QZK8 103 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 HSD17B6O14756 317 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 TIMM23O14925 209 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 TXNL1O43396 289 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 YPEL1O60688 119 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 CD36P16671 472 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 GADD45AP24522 165 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 ZNF134P52741 427 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 SRSF4Q08170 494 aaKnown RBP10.43□□□□□ -0.74
COL28A1-206ENST00000465339 DIAPH2-AS1Q14236 149 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 HMGN3Q15651 99 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 CT45A1Q5HYN5 189 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 PRR31Q5SQ13 230 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 DRAM1Q8N682 238 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 OR10V1Q8NGI7 309 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 CT45A3Q8NHU0 189 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 CFHR4Q92496 578 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 ST6GALNAC6Q969X2 333 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 RAB3CQ96E17 227 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 ARHGAP5-AS1Q96IT6 56 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 CYYR1Q96J86 154 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 YPEL2Q96QA6 119 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 CHCHD6Q9BRQ6 235 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 SIGLEC9Q9Y336 463 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 PKD1L1Q8TDX9 2849 aa10.43□□□□□ -0.74
COL28A1-206ENST00000465339 IGHV1-3A0A0C4DH29 117 aa10.42□□□□□ -0.74
COL28A1-206ENST00000465339 TMEM238LA0A1B0GVL6 79 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms