RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 C8orf86Q6ZUL3 223 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 NANOGP1Q8N7R0 232 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 KLHL30-AS1Q8NEE0 82 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 OR4K15Q8NH41 348 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 OR1L1Q8NH94 360 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 RASL11BQ9BPW5 248 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 BANF2Q9H503 90 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 ZNF580Q9UK33 172 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 COL7A1Q02388 2944 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 TENM3Q9P273 2699 aa11.3□□□□□ -0.6
SNRNP40-203ENST00000463988 PNMA8CA0A1B0GUJ8 204 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 WI2-2373I1.2A0A1W2PRP0 233 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 ZNF736B4DX44 427 aaPredicted RBP11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 H0YHG0 523 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 RRP9O43818 475 aaKnown RBP11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 PDCD6O75340 191 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 ELANEP08246 267 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 GNAO1P09471 354 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 UBBP0CG47 229 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 RCC1P18754 421 aaPredicted RBP11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 RCN1Q15293 331 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 LY6G6FQ5SQ64 297 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 RNLSQ5VYX0 342 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 SIGIRRQ6IA17 410 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 C18orf65Q6ZTR6 163 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 AHSA2Q719I0 299 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 FAM71E2Q8N5Q1 922 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 CST11Q9H112 138 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 TAF9BQ9HBM6 251 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 OR2S2Q9NQN1 319 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 FKBP14Q9NWM8 211 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 KCNIP1Q9NZI2 227 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 ERGIC3Q9Y282 383 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 LRRC42Q9Y546 428 aa11.29□□□□□ -0.6
SNRNP40-203ENST00000463988 CASQ2O14958 399 aaPredicted RBP11.28□□□□□ -0.6
SNRNP40-203ENST00000463988 IGF1P05019 195 aa11.28□□□□□ -0.6
SNRNP40-203ENST00000463988 HOXD3P31249 432 aaPredicted RBP11.28□□□□□ -0.6
SNRNP40-203ENST00000463988 SOX6P35712 828 aa11.28□□□□□ -0.6
SNRNP40-203ENST00000463988 CDX1P47902 265 aaPredicted RBP11.28□□□□□ -0.6
SNRNP40-203ENST00000463988 HTD2P86397 168 aa11.28□□□□□ -0.6
SNRNP40-203ENST00000463988 GPR50Q13585 617 aa11.28□□□□□ -0.6
SNRNP40-203ENST00000463988 MORN2Q502X0 79 aa11.28□□□□□ -0.6
SNRNP40-203ENST00000463988 CXorf66Q5JRM2 361 aaPredicted RBP11.28□□□□□ -0.6
SNRNP40-203ENST00000463988 OGFRL1Q5TC84 451 aaPredicted RBP11.28□□□□□ -0.6
SNRNP40-203ENST00000463988 UNQ9370/PRO34162Q6UXP9 181 aa11.28□□□□□ -0.6
SNRNP40-203ENST00000463988 PRR18Q8N4B5 295 aa11.28□□□□□ -0.6
SNRNP40-203ENST00000463988 MS4A15Q8N5U1 240 aa11.28□□□□□ -0.6
SNRNP40-203ENST00000463988 OR10V1Q8NGI7 309 aa11.28□□□□□ -0.6
SNRNP40-203ENST00000463988 CHCHD6Q9BRQ6 235 aa11.28□□□□□ -0.6
SNRNP40-203ENST00000463988 DCLRE1BQ9H816 532 aa11.28□□□□□ -0.6
SNRNP40-203ENST00000463988 JPT1Q9UK76 154 aa11.28□□□□□ -0.6
SNRNP40-203ENST00000463988 UBE2QL1A1L167 161 aa11.27□□□□□ -0.61
SNRNP40-203ENST00000463988 CCL24O00175 119 aa11.27□□□□□ -0.61
SNRNP40-203ENST00000463988 IGHG4P01861 327 aa11.27□□□□□ -0.61
SNRNP40-203ENST00000463988 RPLP1P05386 114 aaKnown RBP11.27□□□□□ -0.61
SNRNP40-203ENST00000463988 F2RL1P55085 397 aa11.27□□□□□ -0.61
SNRNP40-203ENST00000463988 CFHR3Q02985 330 aa11.27□□□□□ -0.61
SNRNP40-203ENST00000463988 LSAMPQ13449 338 aa11.27□□□□□ -0.61
SNRNP40-203ENST00000463988 DCTN2Q13561 401 aaKnown RBP11.27□□□□□ -0.61
SNRNP40-203ENST00000463988 KIR2DS1Q14954 304 aa11.27□□□□□ -0.61
SNRNP40-203ENST00000463988 DEFB121Q5J5C9 76 aa11.27□□□□□ -0.61
SNRNP40-203ENST00000463988 C6orf141Q5SZD1 244 aa11.27□□□□□ -0.61
SNRNP40-203ENST00000463988 BPIFB6Q8NFQ5 453 aa11.27□□□□□ -0.61
SNRNP40-203ENST00000463988 OR8U1Q8NH10 309 aa11.27□□□□□ -0.61
SNRNP40-203ENST00000463988 MRPL30Q8TCC3 161 aaKnown RBP11.27□□□□□ -0.61
SNRNP40-203ENST00000463988 PHYHIPQ92561 330 aa11.27□□□□□ -0.61
SNRNP40-203ENST00000463988 TFAP2CQ92754 450 aa11.27□□□□□ -0.61
SNRNP40-203ENST00000463988 RAX2Q96IS3 184 aa11.27□□□□□ -0.61
SNRNP40-203ENST00000463988 YPEL1O60688 119 aa11.26□□□□□ -0.61
SNRNP40-203ENST00000463988 RGS11O94810 467 aa11.26□□□□□ -0.61
SNRNP40-203ENST00000463988 OR5H8P0DN80 308 aa11.26□□□□□ -0.61
SNRNP40-203ENST00000463988 CD37P11049 281 aa11.26□□□□□ -0.61
SNRNP40-203ENST00000463988 ACSM3Q53FZ2 586 aa11.26□□□□□ -0.61
SNRNP40-203ENST00000463988 VAX1Q5SQQ9 334 aa11.26□□□□□ -0.61
SNRNP40-203ENST00000463988 C1orf100Q5SVJ3 147 aa11.26□□□□□ -0.61
SNRNP40-203ENST00000463988 GLT8D1Q68CQ7 371 aa11.26□□□□□ -0.61
SNRNP40-203ENST00000463988 FAM46BQ96A09 425 aa11.26□□□□□ -0.61
SNRNP40-203ENST00000463988 NEDD4LQ96PU5 975 aa11.26□□□□□ -0.61
SNRNP40-203ENST00000463988 YPEL2Q96QA6 119 aa11.26□□□□□ -0.61
SNRNP40-203ENST00000463988 HSPB9Q9BQS6 159 aa11.26□□□□□ -0.61
SNRNP40-203ENST00000463988 ABHD14AQ9BUJ0 271 aa11.26□□□□□ -0.61
SNRNP40-203ENST00000463988 MND1Q9BWT6 205 aa11.26□□□□□ -0.61
SNRNP40-203ENST00000463988 NBEAL2Q6ZNJ1 2754 aa11.25□□□□□ -0.61
SNRNP40-203ENST00000463988 CDK1P06493 297 aa11.25□□□□□ -0.61
SNRNP40-203ENST00000463988 VSIG8P0DPA2 414 aa11.25□□□□□ -0.61
SNRNP40-203ENST00000463988 VDAC1P21796 283 aa11.25□□□□□ -0.61
SNRNP40-203ENST00000463988 CHATP28329 748 aa11.25□□□□□ -0.61
SNRNP40-203ENST00000463988 PPP1CCP36873 323 aaKnown RBP11.25□□□□□ -0.61
SNRNP40-203ENST00000463988 LRRTM1Q86UE6 522 aa11.25□□□□□ -0.61
SNRNP40-203ENST00000463988 ODF3L1Q8IXM7 274 aa11.25□□□□□ -0.61
SNRNP40-203ENST00000463988 OR52L2PQ8NGH6 319 aa11.25□□□□□ -0.61
SNRNP40-203ENST00000463988 KCNG3Q8TAE7 436 aa11.25□□□□□ -0.61
SNRNP40-203ENST00000463988 GALMQ96C23 342 aa11.25□□□□□ -0.61
SNRNP40-203ENST00000463988 VCXQ9H320 206 aa11.25□□□□□ -0.61
SNRNP40-203ENST00000463988 ZNF107Q9UII5 783 aaPredicted RBP11.25□□□□□ -0.61
SNRNP40-203ENST00000463988 RAMP3O60896 148 aa11.24□□□□□ -0.61
SNRNP40-203ENST00000463988 PSMB8P28062 276 aa11.24□□□□□ -0.61
SNRNP40-203ENST00000463988 RPS27AP62979 156 aaKnown RBP11.24□□□□□ -0.61
SNRNP40-203ENST00000463988 DGCR2P98153 550 aa11.24□□□□□ -0.61
SNRNP40-203ENST00000463988 GABPB1Q06547 395 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms