RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SLC25A48Q6ZT89 311 aaKnown RBP14.2□□□□□ -0.14
VPS52-214ENST00000463486 PRR18Q8N4B5 295 aa14.2□□□□□ -0.14
VPS52-214ENST00000463486 OCSTAMPQ9BR26 566 aa14.2□□□□□ -0.14
VPS52-214ENST00000463486 FUNDC2Q9BWH2 189 aa14.2□□□□□ -0.14
VPS52-214ENST00000463486 C16orf95Q9H693 158 aa14.2□□□□□ -0.14
VPS52-214ENST00000463486 A0A1W2PPI3 338 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 FAM90A9PA6NNJ1 464 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 POM121CA8CG34 1229 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 TFAP2AP05549 437 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 CRYBA1P05813 215 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 CD24P25063 80 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 CEACAM3P40198 252 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 MORN2Q502X0 79 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 LY6G6FQ5SQ64 297 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 LIAT1Q6ZQX7 453 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 OR52L2PQ8NGH6 319 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 OR5H6Q8NGV6 325 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 LGALS14Q8TCE9 139 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 CFHR4Q92496 578 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 RAB3CQ96E17 227 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 ZNF747Q9BV97 191 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 Q9N2K0 584 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 KCNIP1Q9NZI2 227 aa14.19□□□□□ -0.14
VPS52-214ENST00000463486 HIST1H1DP16402 221 aaKnown RBP14.18□□□□□ -0.14
VPS52-214ENST00000463486 GNB3P16520 340 aa14.18□□□□□ -0.14
VPS52-214ENST00000463486 ALDH3B2P48448 385 aa14.18□□□□□ -0.14
VPS52-214ENST00000463486 ZNF137PP52743 207 aa14.18□□□□□ -0.14
VPS52-214ENST00000463486 LSM3P62310 102 aaKnown RBP14.18□□□□□ -0.14
VPS52-214ENST00000463486 MADCAM1Q13477 382 aa14.18□□□□□ -0.14
VPS52-214ENST00000463486 HABP2Q14520 560 aaPredicted RBP14.18□□□□□ -0.14
VPS52-214ENST00000463486 STEAP3Q658P3 488 aa14.18□□□□□ -0.14
VPS52-214ENST00000463486 DHRS7BQ6IAN0 325 aaPredicted RBP14.18□□□□□ -0.14
VPS52-214ENST00000463486 TMEM219Q86XT9 240 aa14.18□□□□□ -0.14
VPS52-214ENST00000463486 OR10V1Q8NGI7 309 aa14.18□□□□□ -0.14
VPS52-214ENST00000463486 OR4F5Q8NH21 305 aa14.18□□□□□ -0.14
VPS52-214ENST00000463486 RAB9BQ9NP90 201 aa14.18□□□□□ -0.14
VPS52-214ENST00000463486 C12orf4Q9NQ89 552 aa14.18□□□□□ -0.14
VPS52-214ENST00000463486 OR2S2Q9NQN1 319 aa14.18□□□□□ -0.14
VPS52-214ENST00000463486 GNG12Q9UBI6 72 aa14.18□□□□□ -0.14
VPS52-214ENST00000463486 ELF5Q9UKW6 265 aaPredicted RBP14.18□□□□□ -0.14
VPS52-214ENST00000463486 AMMECR1Q9Y4X0 333 aaPredicted RBP14.18□□□□□ -0.14
VPS52-214ENST00000463486 VWFP04275 2813 aa14.18□□□□□ -0.14
VPS52-214ENST00000463486 CLPSL1A2RUU4 121 aa14.17□□□□□ -0.14
VPS52-214ENST00000463486 PPP1CCP36873 323 aaKnown RBP14.17□□□□□ -0.14
VPS52-214ENST00000463486 SCAND1P57086 179 aa14.17□□□□□ -0.14
VPS52-214ENST00000463486 KRTAP10-3P60369 221 aa14.17□□□□□ -0.14
VPS52-214ENST00000463486 MOB1BQ7L9L4 216 aa14.17□□□□□ -0.14
VPS52-214ENST00000463486 OR10X1Q8NGY0 326 aa14.17□□□□□ -0.14
VPS52-214ENST00000463486 SLC25A38Q96DW6 304 aa14.17□□□□□ -0.14
VPS52-214ENST00000463486 CMSS1Q9BQ75 279 aaKnown RBP14.17□□□□□ -0.14
VPS52-214ENST00000463486 ATG5Q9H1Y0 275 aa14.17□□□□□ -0.14
VPS52-214ENST00000463486 BEX1Q9HBH7 125 aa14.17□□□□□ -0.14
VPS52-214ENST00000463486 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.17□□□□□ -0.14
VPS52-214ENST00000463486 ABCB10Q9NRK6 738 aa14.17□□□□□ -0.14
VPS52-214ENST00000463486 JPT1Q9UK76 154 aa14.17□□□□□ -0.14
VPS52-214ENST00000463486 CMYA5Q8N3K9 4069 aa14.17□□□□□ -0.14
VPS52-214ENST00000463486 FBN3Q75N90 2809 aa14.16□□□□□ -0.14
VPS52-214ENST00000463486 IGKV1-6A0A0C4DH72 117 aa14.16□□□□□ -0.14
VPS52-214ENST00000463486 A0A1B0GUS0 222 aa14.16□□□□□ -0.14
VPS52-214ENST00000463486 METTL21EPA6NDL7 271 aa14.16□□□□□ -0.14
VPS52-214ENST00000463486 TIMM23O14925 209 aa14.16□□□□□ -0.14
VPS52-214ENST00000463486 YPEL1O60688 119 aa14.16□□□□□ -0.14
VPS52-214ENST00000463486 KIR2DS4P43632 304 aa14.16□□□□□ -0.14
VPS52-214ENST00000463486 PROK1P58294 105 aa14.16□□□□□ -0.14
VPS52-214ENST00000463486 NCS1P62166 190 aa14.16□□□□□ -0.14
VPS52-214ENST00000463486 ZNF816Q0VGE8 651 aaPredicted RBP14.16□□□□□ -0.14
VPS52-214ENST00000463486 IDNKQ5T6J7 187 aa14.16□□□□□ -0.14
VPS52-214ENST00000463486 CCDC144NLQ6NUI1 221 aa14.16□□□□□ -0.14
VPS52-214ENST00000463486 ODF3L1Q8IXM7 274 aa14.16□□□□□ -0.14
VPS52-214ENST00000463486 C3orf56Q8N813 242 aa14.16□□□□□ -0.14
VPS52-214ENST00000463486 TOMM40LQ969M1 308 aa14.16□□□□□ -0.14
VPS52-214ENST00000463486 RPEQ96AT9 228 aa14.16□□□□□ -0.14
VPS52-214ENST00000463486 GALMQ96C23 342 aa14.16□□□□□ -0.14
VPS52-214ENST00000463486 YPEL2Q96QA6 119 aa14.16□□□□□ -0.14
VPS52-214ENST00000463486 MRPS26Q9BYN8 205 aaKnown RBP14.16□□□□□ -0.14
VPS52-214ENST00000463486 NAA50Q9GZZ1 169 aaKnown RBP14.16□□□□□ -0.14
VPS52-214ENST00000463486 CHMP1AQ9HD42 196 aaPredicted RBP14.16□□□□□ -0.14
VPS52-214ENST00000463486 TMEM127O75204 238 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 SCTP09683 121 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 BRS3P32247 399 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 RAB7AP51149 207 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 HLA-DRB3P79483 266 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 CTF1Q16619 201 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 CDNFQ49AH0 187 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 THNSL2Q86YJ6 484 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 Q8N2B8 174 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 DRAM1Q8N682 238 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 WFDC12Q8WWY7 111 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 PARP12Q9H0J9 701 aaKnown RBP14.15□□□□□ -0.14
VPS52-214ENST00000463486 ZNF702PQ9H963 129 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 RAB18Q9NP72 206 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 RHBDL2Q9NX52 303 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 PITPNC1Q9UKF7 332 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 SIGLEC9Q9Y336 463 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 ETV7Q9Y603 341 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 NBEAL1Q6ZS30 2694 aa14.15□□□□□ -0.14
VPS52-214ENST00000463486 IGHV1-3A0A0C4DH29 117 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 SERPINE3A8MV23 424 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 HSD17B6O14756 317 aa14.14□□□□□ -0.15
VPS52-214ENST00000463486 AMY1AP04745 511 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms