RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 KCNK15Q9H427 330 aa18.59■□□□□ 0.57
CBX3-204ENST00000456948 JPT1Q9UK76 154 aa18.59■□□□□ 0.57
CBX3-204ENST00000456948 METTL21EPA6NDL7 271 aa18.58■□□□□ 0.56
CBX3-204ENST00000456948 HSD17B6O14756 317 aa18.58■□□□□ 0.56
CBX3-204ENST00000456948 TXNL1O43396 289 aa18.58■□□□□ 0.56
CBX3-204ENST00000456948 CD24P25063 80 aa18.58■□□□□ 0.56
CBX3-204ENST00000456948 VEGFCP49767 419 aa18.58■□□□□ 0.56
CBX3-204ENST00000456948 ZNF816Q0VGE8 651 aaPredicted RBP18.58■□□□□ 0.56
CBX3-204ENST00000456948 UTF1Q5T230 341 aa18.58■□□□□ 0.56
CBX3-204ENST00000456948 Q8N2B8 174 aa18.58■□□□□ 0.56
CBX3-204ENST00000456948 SETD6Q8TBK2 473 aa18.58■□□□□ 0.56
CBX3-204ENST00000456948 TXNL4BQ9NX01 149 aaKnown RBP18.58■□□□□ 0.56
CBX3-204ENST00000456948 SOCS1O15524 211 aa18.57■□□□□ 0.56
CBX3-204ENST00000456948 VSIG10L2P0DP72 767 aa18.57■□□□□ 0.56
CBX3-204ENST00000456948 GADD45AP24522 165 aa18.57■□□□□ 0.56
CBX3-204ENST00000456948 SRSF4Q08170 494 aaKnown RBP18.57■□□□□ 0.56
CBX3-204ENST00000456948 HERPUD1Q15011 391 aa18.57■□□□□ 0.56
CBX3-204ENST00000456948 NEDD8Q15843 81 aa18.57■□□□□ 0.56
CBX3-204ENST00000456948 MOB3BQ86TA1 216 aa18.57■□□□□ 0.56
CBX3-204ENST00000456948 DRAM1Q8N682 238 aa18.57■□□□□ 0.56
CBX3-204ENST00000456948 OR10V1Q8NGI7 309 aa18.57■□□□□ 0.56
CBX3-204ENST00000456948 OR56B4Q8NH76 319 aa18.57■□□□□ 0.56
CBX3-204ENST00000456948 KCTD7Q96MP8 289 aa18.57■□□□□ 0.56
CBX3-204ENST00000456948 ZNF702PQ9H963 129 aa18.57■□□□□ 0.56
CBX3-204ENST00000456948 SIGLEC9Q9Y336 463 aa18.57■□□□□ 0.56
CBX3-204ENST00000456948 TMEM272A0A1B0GTI8 110 aa18.56■□□□□ 0.56
CBX3-204ENST00000456948 TNFAIP8O95379 198 aa18.56■□□□□ 0.56
CBX3-204ENST00000456948 RAB6AP20340 208 aa18.56■□□□□ 0.56
CBX3-204ENST00000456948 VDAC2P45880 294 aaPredicted RBP18.56■□□□□ 0.56
CBX3-204ENST00000456948 SLC25A48Q6ZT89 311 aaKnown RBP18.56■□□□□ 0.56
CBX3-204ENST00000456948 KLHDC1Q8N7A1 406 aa18.56■□□□□ 0.56
CBX3-204ENST00000456948 A0A087WXM4 84 aa18.55■□□□□ 0.56
CBX3-204ENST00000456948 FAM90A9PA6NNJ1 464 aa18.55■□□□□ 0.56
CBX3-204ENST00000456948 YPEL1O60688 119 aa18.55■□□□□ 0.56
CBX3-204ENST00000456948 NAPSAO96009 420 aa18.55■□□□□ 0.56
CBX3-204ENST00000456948 SNRNP70P08621 437 aaKnown RBP18.55■□□□□ 0.56
CBX3-204ENST00000456948 OR10A3P58181 314 aa18.55■□□□□ 0.56
CBX3-204ENST00000456948 BLCAPP62952 87 aa18.55■□□□□ 0.56
CBX3-204ENST00000456948 ARL6IP1Q15041 203 aa18.55■□□□□ 0.56
CBX3-204ENST00000456948 MORN2Q502X0 79 aa18.55■□□□□ 0.56
CBX3-204ENST00000456948 LY6G6FQ5SQ64 297 aa18.55■□□□□ 0.56
CBX3-204ENST00000456948 PTX4Q96A99 478 aa18.55■□□□□ 0.56
CBX3-204ENST00000456948 YPEL2Q96QA6 119 aa18.55■□□□□ 0.56
CBX3-204ENST00000456948 CMSS1Q9BQ75 279 aaKnown RBP18.55■□□□□ 0.56
CBX3-204ENST00000456948 C12orf4Q9NQ89 552 aa18.55■□□□□ 0.56
CBX3-204ENST00000456948 AK3Q9UIJ7 227 aa18.55■□□□□ 0.56
CBX3-204ENST00000456948 MOB4Q9Y3A3 225 aa18.55■□□□□ 0.56
CBX3-204ENST00000456948 A0A0A6YYD4 124 aa18.54■□□□□ 0.56
CBX3-204ENST00000456948 TRBV6-6A0A0A6YYG2 114 aa18.54■□□□□ 0.56
CBX3-204ENST00000456948 IGHV1-3A0A0C4DH29 117 aa18.54■□□□□ 0.56
CBX3-204ENST00000456948 A0A1W2PPI3 338 aa18.54■□□□□ 0.56
CBX3-204ENST00000456948 NOTOA8MTQ0 251 aa18.54■□□□□ 0.56
CBX3-204ENST00000456948 LDLRAD4O15165 306 aa18.54■□□□□ 0.56
CBX3-204ENST00000456948 TMEM11P17152 192 aa18.54■□□□□ 0.56
CBX3-204ENST00000456948 HMGN3Q15651 99 aa18.54■□□□□ 0.56
CBX3-204ENST00000456948 TIMM50Q3ZCQ8 353 aa18.54■□□□□ 0.56
CBX3-204ENST00000456948 TGIF2LXQ8IUE1 241 aa18.54■□□□□ 0.56
CBX3-204ENST00000456948 OR2AK2Q8NG84 335 aa18.54■□□□□ 0.56
CBX3-204ENST00000456948 IL1F10Q8WWZ1 152 aa18.54■□□□□ 0.56
CBX3-204ENST00000456948 RAB3CQ96E17 227 aa18.54■□□□□ 0.56
CBX3-204ENST00000456948 ARHGAP5-AS1Q96IT6 56 aa18.54■□□□□ 0.56
CBX3-204ENST00000456948 CD3GP09693 182 aa18.53■□□□□ 0.56
CBX3-204ENST00000456948 CD36P16671 472 aa18.53■□□□□ 0.56
CBX3-204ENST00000456948 KRTAP10-3P60369 221 aa18.53■□□□□ 0.56
CBX3-204ENST00000456948 C2orf68Q2NKX9 166 aa18.53■□□□□ 0.56
CBX3-204ENST00000456948 CT45A1Q5HYN5 189 aa18.53■□□□□ 0.56
CBX3-204ENST00000456948 TREML4Q6UXN2 200 aa18.53■□□□□ 0.56
CBX3-204ENST00000456948 LYG1Q8N1E2 194 aa18.53■□□□□ 0.56
CBX3-204ENST00000456948 TSPAN14Q8NG11 270 aa18.53■□□□□ 0.56
CBX3-204ENST00000456948 OR52L2PQ8NGH6 319 aa18.53■□□□□ 0.56
CBX3-204ENST00000456948 CT45A3Q8NHU0 189 aa18.53■□□□□ 0.56
CBX3-204ENST00000456948 RTN4IP1Q8WWV3 396 aaPredicted RBP18.53■□□□□ 0.56
CBX3-204ENST00000456948 ABHD14AQ9BUJ0 271 aa18.53■□□□□ 0.56
CBX3-204ENST00000456948 PECRQ9BY49 303 aa18.53■□□□□ 0.56
CBX3-204ENST00000456948 IGKV1D-33P01593 117 aa18.52■□□□□ 0.56
CBX3-204ENST00000456948 IGKV1-33P01594 117 aa18.52■□□□□ 0.56
CBX3-204ENST00000456948 REG1BP48304 166 aa18.52■□□□□ 0.56
CBX3-204ENST00000456948 ZNF137PP52743 207 aa18.52■□□□□ 0.56
CBX3-204ENST00000456948 TMEM50BP56557 158 aa18.52■□□□□ 0.56
CBX3-204ENST00000456948 ABCA11PQ4W5N1 156 aa18.52■□□□□ 0.56
CBX3-204ENST00000456948 ZNF880Q6PDB4 577 aa18.52■□□□□ 0.56
CBX3-204ENST00000456948 ZNF439Q8NDP4 499 aa18.52■□□□□ 0.56
CBX3-204ENST00000456948 OR2T10Q8NGZ9 312 aa18.52■□□□□ 0.56
CBX3-204ENST00000456948 CFHR4Q92496 578 aa18.52■□□□□ 0.56
CBX3-204ENST00000456948 CHCHD6Q9BRQ6 235 aa18.52■□□□□ 0.56
CBX3-204ENST00000456948 CENPOQ9BU64 300 aa18.52■□□□□ 0.56
CBX3-204ENST00000456948 GHITMQ9H3K2 345 aa18.52■□□□□ 0.56
CBX3-204ENST00000456948 SERTAD4Q9NUC0 356 aa18.52■□□□□ 0.56
CBX3-204ENST00000456948 LOC100506127A0A0U1RQW1 187 aa18.51■□□□□ 0.55
CBX3-204ENST00000456948 SHISA3A0PJX4 238 aa18.51■□□□□ 0.55
CBX3-204ENST00000456948 FOXI3A8MTJ6 420 aaPredicted RBP18.51■□□□□ 0.55
CBX3-204ENST00000456948 HSPA12AO43301 675 aa18.51■□□□□ 0.55
CBX3-204ENST00000456948 SCGNO76038 276 aa18.51■□□□□ 0.55
CBX3-204ENST00000456948 CD1BP29016 333 aa18.51■□□□□ 0.55
CBX3-204ENST00000456948 ZNF134P52741 427 aa18.51■□□□□ 0.55
CBX3-204ENST00000456948 DIAPH2-AS1Q14236 149 aa18.51■□□□□ 0.55
CBX3-204ENST00000456948 HABP2Q14520 560 aaPredicted RBP18.51■□□□□ 0.55
CBX3-204ENST00000456948 HNF4GQ14541 408 aa18.51■□□□□ 0.55
CBX3-204ENST00000456948 OR10R2Q8NGX6 335 aa18.51■□□□□ 0.55
CBX3-204ENST00000456948 ST6GALNAC6Q969X2 333 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms