RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 FGF21Q9NSA1 209 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 BOLA1Q9Y3E2 137 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 ZNF25P17030 456 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-204ENST00000455883 RPS4XP62701 263 aaKnown RBP4.61□□□□□ -1.67
CSMD3-204ENST00000455883 SPEM1Q8N4L4 309 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 TPPP3Q9BW30 176 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 DCAF16Q9NXF7 216 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 ZMIZ1Q9ULJ6 1067 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 A8MXK9 166 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 RAB29O14966 203 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 PTGDSP41222 190 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 AGERQ15109 404 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 GMLQ99445 158 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 MAP1LC3AQ9H492 121 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 SRD5A2P31213 254 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 SFTA2Q6UW10 78 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 TMEM108Q6UXF1 575 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 TMEM230Q96A57 120 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 PARD6GQ9BYG4 376 aaPredicted RBP4.6□□□□□ -1.67
CSMD3-204ENST00000455883 IL4P05112 153 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 NHLRC3Q5JS37 347 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 MEX3DQ86XN8 651 aaKnown RBP4.6□□□□□ -1.67
CSMD3-204ENST00000455883 CNEP1R1Q8N9A8 125 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 ARPC1AQ92747 370 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 NPDC1Q9NQX5 325 aaPredicted RBP4.6□□□□□ -1.67
CSMD3-204ENST00000455883 TMEFF2Q9UIK5 374 aaPredicted RBP4.6□□□□□ -1.67
CSMD3-204ENST00000455883 CFAP20Q9Y6A4 193 aaKnown RBP4.6□□□□□ -1.67
CSMD3-204ENST00000455883 C6orf132Q5T0Z8 1188 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 NDUFAF3Q9BU61 184 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 SLC2A10O95528 541 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 CA2P00918 260 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 ZNF121P58317 390 aaPredicted RBP4.6□□□□□ -1.67
CSMD3-204ENST00000455883 SRSF7Q16629 238 aaKnown RBP eCLIP4.6□□□□□ -1.67
CSMD3-204ENST00000455883 SLC25A26Q70HW3 274 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 LINC00518Q8N0U6 118 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 CIARTQ8N365 385 aaPredicted RBP4.6□□□□□ -1.67
CSMD3-204ENST00000455883 RNF133Q8WVZ7 376 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 C21orf140B9A014 251 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 PPYP01298 95 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 PRSS1P07477 247 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 OTX2P32243 289 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 CLLU1OSQ5K130 101 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 LINC00469Q8N7U9 141 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 UPK2O00526 184 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 DTD1Q8TEA8 209 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 G6PC2Q9NQR9 355 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 LRP12Q9Y561 859 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 OR11H12B2RN74 326 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 K7EQS6 105 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 SMAD9O15198 467 aaKnown RBP4.6□□□□□ -1.67
CSMD3-204ENST00000455883 SNAI1O95863 264 aaPredicted RBP4.6□□□□□ -1.67
CSMD3-204ENST00000455883 CD74P04233 296 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 ERGP11308 486 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 ID2Q02363 134 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 PRR18Q8N4B5 295 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 OR11H1Q8NG94 326 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 OR11H2Q8NH07 326 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 KISS1RQ969F8 398 aaPredicted RBP4.6□□□□□ -1.67
CSMD3-204ENST00000455883 MS4A6AQ9H2W1 248 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 DHHO43323 396 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 GJB5O95377 273 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 GYPBP06028 91 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 MYOGP15173 224 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 HBBP68871 147 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 ACSM6Q6P461 480 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 MOGAT3Q86VF5 341 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 AICDAQ9GZX7 198 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 RNF122Q9H9V4 155 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 PRDM7Q9NQW5 492 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 TCFL5Q9UL49 500 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 SRSF2Q01130 221 aaKnown RBP4.6□□□□□ -1.67
CSMD3-204ENST00000455883 WIPI1Q5MNZ9 446 aaPredicted RBP4.6□□□□□ -1.67
CSMD3-204ENST00000455883 RGS7BPQ6MZT1 257 aaPredicted RBP4.6□□□□□ -1.67
CSMD3-204ENST00000455883 IFITM10A6NMD0 228 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 KBTBD11O94819 623 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 CRYBA1P05813 215 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 IGFBP4P22692 258 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 CYP2G1PQ6ZSU1 146 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 OR4C12Q96R67 309 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 TTTY10Q9BZA0 68 aa4.6□□□□□ -1.67
CSMD3-204ENST00000455883 MMP23AO75900 390 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 NMBP08949 121 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 PCP4P48539 62 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 MRPL43Q8N983 215 aaKnown RBP4.59□□□□□ -1.67
CSMD3-204ENST00000455883 COA4Q9NYJ1 87 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.59□□□□□ -1.67
CSMD3-204ENST00000455883 LINC00869P0C866 280 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 OR4P4Q8NGL7 312 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 OR1N2Q8NGR9 330 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 TSPAN32Q96QS1 320 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 SLC25A37Q9NYZ2 338 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 FBLN5Q9UBX5 448 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 MTCH2Q9Y6C9 303 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 A0A1B0GVG6 124 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 MPZL1O95297 269 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 B3GALT4O96024 378 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 QDPRP09417 244 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 HINT1P49773 126 aaPredicted RBP4.59□□□□□ -1.67
CSMD3-204ENST00000455883 PRTGQ2VWP7 1150 aa4.59□□□□□ -1.67
CSMD3-204ENST00000455883 C5orf30Q96GV9 206 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms