RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 HMGN3Q15651 99 aa13.89□□□□□ -0.19
USP39-208ENST00000455732 NEDD8Q15843 81 aa13.89□□□□□ -0.19
USP39-208ENST00000455732 STEAP3Q658P3 488 aa13.89□□□□□ -0.19
USP39-208ENST00000455732 SLC25A48Q6ZT89 311 aaKnown RBP13.89□□□□□ -0.19
USP39-208ENST00000455732 TPRA1Q86W33 373 aa13.89□□□□□ -0.19
USP39-208ENST00000455732 THNSL2Q86YJ6 484 aa13.89□□□□□ -0.19
USP39-208ENST00000455732 OR2T6Q8NHC8 308 aa13.89□□□□□ -0.19
USP39-208ENST00000455732 ZNF702PQ9H963 129 aa13.89□□□□□ -0.19
USP39-208ENST00000455732 GNG12Q9UBI6 72 aa13.89□□□□□ -0.19
USP39-208ENST00000455732 JPT1Q9UK76 154 aa13.89□□□□□ -0.19
USP39-208ENST00000455732 IGHV3-43A0A0B4J1X8 118 aa13.88□□□□□ -0.19
USP39-208ENST00000455732 A0A1W2PPE3 182 aa13.88□□□□□ -0.19
USP39-208ENST00000455732 NOTOA8MTQ0 251 aa13.88□□□□□ -0.19
USP39-208ENST00000455732 KCNAB3O43448 404 aa13.88□□□□□ -0.19
USP39-208ENST00000455732 IGHV3-43DP0DP04 118 aa13.88□□□□□ -0.19
USP39-208ENST00000455732 RAB6AP20340 208 aa13.88□□□□□ -0.19
USP39-208ENST00000455732 VEGFCP49767 419 aa13.88□□□□□ -0.19
USP39-208ENST00000455732 ZNF137PP52743 207 aa13.88□□□□□ -0.19
USP39-208ENST00000455732 HABP2Q14520 560 aaPredicted RBP13.88□□□□□ -0.19
USP39-208ENST00000455732 Q6ZPA2 131 aa13.88□□□□□ -0.19
USP39-208ENST00000455732 PRR18Q8N4B5 295 aa13.88□□□□□ -0.19
USP39-208ENST00000455732 CFHR4Q92496 578 aa13.88□□□□□ -0.19
USP39-208ENST00000455732 PTX4Q96A99 478 aa13.88□□□□□ -0.19
USP39-208ENST00000455732 AKR1E2Q96JD6 320 aa13.88□□□□□ -0.19
USP39-208ENST00000455732 OR51E2Q9H255 320 aa13.88□□□□□ -0.19
USP39-208ENST00000455732 SIGLEC9Q9Y336 463 aa13.88□□□□□ -0.19
USP39-208ENST00000455732 A0A087WXM4 84 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 HSD17B6O14756 317 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 TIMM23O14925 209 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 RRP9O43818 475 aaKnown RBP13.87□□□□□ -0.19
USP39-208ENST00000455732 OR2F2O95006 317 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 FAM106CPP0CH98 169 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 CD36P16671 472 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 IL3RAP26951 378 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 PLA2G7Q13093 441 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 DIAPH2-AS1Q14236 149 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 LY6G6FQ5SQ64 297 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 FAM53AQ6NSI3 398 aaPredicted RBP13.87□□□□□ -0.19
USP39-208ENST00000455732 TSPAN14Q8NG11 270 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 ST6GALNAC6Q969X2 333 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 ARHGAP5-AS1Q96IT6 56 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 KCTD7Q96MP8 289 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 RBM14Q96PK6 669 aaKnown RBP13.87□□□□□ -0.19
USP39-208ENST00000455732 PECRQ9BY49 303 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 PRSS22Q9GZN4 317 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 CHMP1AQ9HD42 196 aaPredicted RBP13.87□□□□□ -0.19
USP39-208ENST00000455732 C12orf4Q9NQ89 552 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 OR2S2Q9NQN1 319 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 AK3Q9UIJ7 227 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 MGAT4AQ9UM21 535 aa13.87□□□□□ -0.19
USP39-208ENST00000455732 NOTCH1P46531 2555 aa13.86□□□□□ -0.19
USP39-208ENST00000455732 TRIM64CA6NLI5 447 aa13.86□□□□□ -0.19
USP39-208ENST00000455732 SLC31A2O15432 143 aa13.86□□□□□ -0.19
USP39-208ENST00000455732 GAPDHP04406 335 aaKnown RBP13.86□□□□□ -0.19
USP39-208ENST00000455732 CD24P25063 80 aa13.86□□□□□ -0.19
USP39-208ENST00000455732 MORN2Q502X0 79 aa13.86□□□□□ -0.19
USP39-208ENST00000455732 FBLN7Q53RD9 439 aa13.86□□□□□ -0.19
USP39-208ENST00000455732 CT45A1Q5HYN5 189 aa13.86□□□□□ -0.19
USP39-208ENST00000455732 PLAC9Q5JTB6 97 aa13.86□□□□□ -0.19
USP39-208ENST00000455732 Q6ZTK2 550 aa13.86□□□□□ -0.19
USP39-208ENST00000455732 OR10V1Q8NGI7 309 aa13.86□□□□□ -0.19
USP39-208ENST00000455732 OR56B4Q8NH76 319 aa13.86□□□□□ -0.19
USP39-208ENST00000455732 CT45A3Q8NHU0 189 aa13.86□□□□□ -0.19
USP39-208ENST00000455732 GALMQ96C23 342 aa13.86□□□□□ -0.19
USP39-208ENST00000455732 CHCHD6Q9BRQ6 235 aa13.86□□□□□ -0.19
USP39-208ENST00000455732 SLC25A33Q9BSK2 321 aa13.86□□□□□ -0.19
USP39-208ENST00000455732 VCX3AQ9NNX9 186 aa13.86□□□□□ -0.19
USP39-208ENST00000455732 ABRACLQ9P1F3 81 aa13.86□□□□□ -0.19
USP39-208ENST00000455732 IGHV1-3A0A0C4DH29 117 aa13.85□□□□□ -0.19
USP39-208ENST00000455732 TXNL1O43396 289 aa13.85□□□□□ -0.19
USP39-208ENST00000455732 YPEL1O60688 119 aa13.85□□□□□ -0.19
USP39-208ENST00000455732 GADD45AP24522 165 aa13.85□□□□□ -0.19
USP39-208ENST00000455732 ZNF134P52741 427 aa13.85□□□□□ -0.19
USP39-208ENST00000455732 GNMTQ14749 295 aa13.85□□□□□ -0.19
USP39-208ENST00000455732 DRAM1Q8N682 238 aa13.85□□□□□ -0.19
USP39-208ENST00000455732 CAPSLQ8WWF8 208 aa13.85□□□□□ -0.19
USP39-208ENST00000455732 YPEL2Q96QA6 119 aa13.85□□□□□ -0.19
USP39-208ENST00000455732 SERTAD4Q9NUC0 356 aa13.85□□□□□ -0.19
USP39-208ENST00000455732 A0A0B4J203 849 aa13.84□□□□□ -0.19
USP39-208ENST00000455732 M0QZ24 198 aa13.84□□□□□ -0.19
USP39-208ENST00000455732 M0QZK8 103 aa13.84□□□□□ -0.19
USP39-208ENST00000455732 RAB27BO00194 218 aa13.84□□□□□ -0.19
USP39-208ENST00000455732 RGS11O94810 467 aa13.84□□□□□ -0.19
USP39-208ENST00000455732 SNRNP70P08621 437 aaKnown RBP13.84□□□□□ -0.19
USP39-208ENST00000455732 SLC2A2P11168 524 aaPredicted RBP13.84□□□□□ -0.19
USP39-208ENST00000455732 SDC2P34741 201 aa13.84□□□□□ -0.19
USP39-208ENST00000455732 PPP1CCP36873 323 aaKnown RBP13.84□□□□□ -0.19
USP39-208ENST00000455732 BLCAPP62952 87 aa13.84□□□□□ -0.19
USP39-208ENST00000455732 EBI3Q14213 229 aa13.84□□□□□ -0.19
USP39-208ENST00000455732 TIMM50Q3ZCQ8 353 aa13.84□□□□□ -0.19
USP39-208ENST00000455732 SFXN4Q6P4A7 337 aa13.84□□□□□ -0.19
USP39-208ENST00000455732 IZUMO1Q8IYV9 350 aa13.84□□□□□ -0.19
USP39-208ENST00000455732 OR52L2PQ8NGH6 319 aa13.84□□□□□ -0.19
USP39-208ENST00000455732 OR10R2Q8NGX6 335 aa13.84□□□□□ -0.19
USP39-208ENST00000455732 RTN4IP1Q8WWV3 396 aaPredicted RBP13.84□□□□□ -0.19
USP39-208ENST00000455732 RAB3CQ96E17 227 aa13.84□□□□□ -0.19
USP39-208ENST00000455732 CMSS1Q9BQ75 279 aaKnown RBP13.84□□□□□ -0.19
USP39-208ENST00000455732 HDHD3Q9BSH5 251 aaPredicted RBP13.84□□□□□ -0.19
USP39-208ENST00000455732 ABHD14AQ9BUJ0 271 aa13.84□□□□□ -0.19
USP39-208ENST00000455732 KCNK7Q9Y2U2 307 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms