RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 FAM53AQ6NSI3 398 aaPredicted RBP16.06■□□□□ 0.16
COL9A3-202ENST00000452372 Q6ZPA2 131 aa16.06■□□□□ 0.16
COL9A3-202ENST00000452372 MOB1BQ7L9L4 216 aa16.06■□□□□ 0.16
COL9A3-202ENST00000452372 C5orf24Q7Z6I8 188 aa16.06■□□□□ 0.16
COL9A3-202ENST00000452372 CROCCP3Q8IVE0 287 aa16.06■□□□□ 0.16
COL9A3-202ENST00000452372 CMSS1Q9BQ75 279 aaKnown RBP16.06■□□□□ 0.16
COL9A3-202ENST00000452372 HDHD3Q9BSH5 251 aaPredicted RBP16.06■□□□□ 0.16
COL9A3-202ENST00000452372 GNG12Q9UBI6 72 aa16.06■□□□□ 0.16
COL9A3-202ENST00000452372 KCNK7Q9Y2U2 307 aa16.06■□□□□ 0.16
COL9A3-202ENST00000452372 WNK1Q9H4A3 2382 aa16.06■□□□□ 0.16
COL9A3-202ENST00000452372 A0A1W2PPE3 182 aa16.05■□□□□ 0.16
COL9A3-202ENST00000452372 NDUFA7O95182 113 aa16.05■□□□□ 0.16
COL9A3-202ENST00000452372 RPS19P39019 145 aaKnown RBP16.05■□□□□ 0.16
COL9A3-202ENST00000452372 RELBQ01201 579 aa16.05■□□□□ 0.16
COL9A3-202ENST00000452372 MADCAM1Q13477 382 aa16.05■□□□□ 0.16
COL9A3-202ENST00000452372 OLFML2AQ68BL7 652 aa16.05■□□□□ 0.16
COL9A3-202ENST00000452372 LIAT1Q6ZQX7 453 aa16.05■□□□□ 0.16
COL9A3-202ENST00000452372 OR10X1Q8NGY0 326 aa16.05■□□□□ 0.16
COL9A3-202ENST00000452372 LGALS14Q8TCE9 139 aa16.05■□□□□ 0.16
COL9A3-202ENST00000452372 GALMQ96C23 342 aa16.05■□□□□ 0.16
COL9A3-202ENST00000452372 OCSTAMPQ9BR26 566 aa16.05■□□□□ 0.16
COL9A3-202ENST00000452372 C12orf4Q9NQ89 552 aa16.05■□□□□ 0.16
COL9A3-202ENST00000452372 OR2S2Q9NQN1 319 aa16.05■□□□□ 0.16
COL9A3-202ENST00000452372 MGAT4AQ9UM21 535 aa16.05■□□□□ 0.16
COL9A3-202ENST00000452372 VWFP04275 2813 aa16.04■□□□□ 0.16
COL9A3-202ENST00000452372 MFNGO00587 321 aa16.04■□□□□ 0.16
COL9A3-202ENST00000452372 TFAP2AP05549 437 aa16.04■□□□□ 0.16
COL9A3-202ENST00000452372 BRS3P32247 399 aa16.04■□□□□ 0.16
COL9A3-202ENST00000452372 ALDH3B2P48448 385 aa16.04■□□□□ 0.16
COL9A3-202ENST00000452372 ARHGDIBP52566 201 aa16.04■□□□□ 0.16
COL9A3-202ENST00000452372 STEAP3Q658P3 488 aa16.04■□□□□ 0.16
COL9A3-202ENST00000452372 DHRS7BQ6IAN0 325 aaPredicted RBP16.04■□□□□ 0.16
COL9A3-202ENST00000452372 CCDC144NLQ6NUI1 221 aa16.04■□□□□ 0.16
COL9A3-202ENST00000452372 ZNF439Q8NDP4 499 aa16.04■□□□□ 0.16
COL9A3-202ENST00000452372 SETD6Q8TBK2 473 aa16.04■□□□□ 0.16
COL9A3-202ENST00000452372 Q9N2K0 584 aa16.04■□□□□ 0.16
COL9A3-202ENST00000452372 RAB18Q9NP72 206 aa16.04■□□□□ 0.16
COL9A3-202ENST00000452372 ABRACLQ9P1F3 81 aa16.04■□□□□ 0.16
COL9A3-202ENST00000452372 JPT1Q9UK76 154 aa16.04■□□□□ 0.16
COL9A3-202ENST00000452372 PITPNC1Q9UKF7 332 aa16.04■□□□□ 0.16
COL9A3-202ENST00000452372 TCF19Q9Y242 345 aa16.04■□□□□ 0.16
COL9A3-202ENST00000452372 ETV7Q9Y603 341 aa16.04■□□□□ 0.16
COL9A3-202ENST00000452372 A6NDX4 124 aa16.03■□□□□ 0.16
COL9A3-202ENST00000452372 SERPINE3A8MV23 424 aa16.03■□□□□ 0.16
COL9A3-202ENST00000452372 SCGNO76038 276 aa16.03■□□□□ 0.16
COL9A3-202ENST00000452372 CD3GP09693 182 aa16.03■□□□□ 0.16
COL9A3-202ENST00000452372 HIST1H1DP16402 221 aaKnown RBP16.03■□□□□ 0.16
COL9A3-202ENST00000452372 GNB3P16520 340 aa16.03■□□□□ 0.16
COL9A3-202ENST00000452372 ZNF134P52741 427 aa16.03■□□□□ 0.16
COL9A3-202ENST00000452372 RAG2P55895 527 aa16.03■□□□□ 0.16
COL9A3-202ENST00000452372 ARL6IP1Q15041 203 aa16.03■□□□□ 0.16
COL9A3-202ENST00000452372 MORN2Q502X0 79 aa16.03■□□□□ 0.16
COL9A3-202ENST00000452372 SLC25A48Q6ZT89 311 aaKnown RBP16.03■□□□□ 0.16
COL9A3-202ENST00000452372 ANKRD13BQ86YJ7 626 aa16.03■□□□□ 0.16
COL9A3-202ENST00000452372 OR52L2PQ8NGH6 319 aa16.03■□□□□ 0.16
COL9A3-202ENST00000452372 OR10V1Q8NGI7 309 aa16.03■□□□□ 0.16
COL9A3-202ENST00000452372 OR5H6Q8NGV6 325 aa16.03■□□□□ 0.16
COL9A3-202ENST00000452372 OR4F5Q8NH21 305 aa16.03■□□□□ 0.16
COL9A3-202ENST00000452372 RPEQ96AT9 228 aa16.03■□□□□ 0.16
COL9A3-202ENST00000452372 MMP24Q9Y5R2 645 aa16.03■□□□□ 0.16
COL9A3-202ENST00000452372 A0A075B6Q4 140 aa16.02■□□□□ 0.16
COL9A3-202ENST00000452372 A0A1B0GUS0 222 aa16.02■□□□□ 0.16
COL9A3-202ENST00000452372 YPEL1O60688 119 aa16.02■□□□□ 0.16
COL9A3-202ENST00000452372 MDKP21741 143 aaPredicted RBP16.02■□□□□ 0.16
COL9A3-202ENST00000452372 MNDAP41218 407 aa16.02■□□□□ 0.16
COL9A3-202ENST00000452372 NCS1P62166 190 aa16.02■□□□□ 0.16
COL9A3-202ENST00000452372 MRPS15P82914 257 aaKnown RBP16.02■□□□□ 0.16
COL9A3-202ENST00000452372 CT45A1Q5HYN5 189 aa16.02■□□□□ 0.16
COL9A3-202ENST00000452372 LY6G6FQ5SQ64 297 aa16.02■□□□□ 0.16
COL9A3-202ENST00000452372 CCBE1Q6UXH8 406 aaPredicted RBP16.02■□□□□ 0.16
COL9A3-202ENST00000452372 CT45A3Q8NHU0 189 aa16.02■□□□□ 0.16
COL9A3-202ENST00000452372 TOMM40LQ969M1 308 aa16.02■□□□□ 0.16
COL9A3-202ENST00000452372 YPEL2Q96QA6 119 aa16.02■□□□□ 0.16
COL9A3-202ENST00000452372 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.02■□□□□ 0.16
COL9A3-202ENST00000452372 RHBDL2Q9NX52 303 aa16.02■□□□□ 0.16
COL9A3-202ENST00000452372 SLC31A2O15432 143 aa16.01■□□□□ 0.15
COL9A3-202ENST00000452372 KCNAB3O43448 404 aa16.01■□□□□ 0.15
COL9A3-202ENST00000452372 CHST1O43916 411 aa16.01■□□□□ 0.15
COL9A3-202ENST00000452372 TSPAN9O75954 239 aa16.01■□□□□ 0.15
COL9A3-202ENST00000452372 RGS11O94810 467 aa16.01■□□□□ 0.15
COL9A3-202ENST00000452372 SERPINB10P48595 397 aa16.01■□□□□ 0.15
COL9A3-202ENST00000452372 RAB7AP51149 207 aa16.01■□□□□ 0.15
COL9A3-202ENST00000452372 VBP1P61758 197 aa16.01■□□□□ 0.15
COL9A3-202ENST00000452372 HLA-DRB3P79483 266 aa16.01■□□□□ 0.15
COL9A3-202ENST00000452372 DIAPH2-AS1Q14236 149 aa16.01■□□□□ 0.15
COL9A3-202ENST00000452372 GNMTQ14749 295 aa16.01■□□□□ 0.15
COL9A3-202ENST00000452372 CDNFQ49AH0 187 aa16.01■□□□□ 0.15
COL9A3-202ENST00000452372 Q6ZSV7 163 aa16.01■□□□□ 0.15
COL9A3-202ENST00000452372 IL1F10Q8WWZ1 152 aa16.01■□□□□ 0.15
COL9A3-202ENST00000452372 SLC25A46Q96AG3 418 aa16.01■□□□□ 0.15
COL9A3-202ENST00000452372 BEX1Q9HBH7 125 aa16.01■□□□□ 0.15
COL9A3-202ENST00000452372 SPATA2Q9UM82 520 aa16.01■□□□□ 0.15
COL9A3-202ENST00000452372 GAPDHP04406 335 aaKnown RBP16■□□□□ 0.15
COL9A3-202ENST00000452372 IL3RAP26951 378 aa16■□□□□ 0.15
COL9A3-202ENST00000452372 PPP1CCP36873 323 aaKnown RBP16■□□□□ 0.15
COL9A3-202ENST00000452372 ZNF816Q0VGE8 651 aaPredicted RBP16■□□□□ 0.15
COL9A3-202ENST00000452372 CTF1Q16619 201 aa16■□□□□ 0.15
COL9A3-202ENST00000452372 GPR141Q7Z602 305 aa16■□□□□ 0.15
COL9A3-202ENST00000452372 OR8H3Q8N146 312 aa16■□□□□ 0.15
COL9A3-202ENST00000452372 ST6GALNAC6Q969X2 333 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms