RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 OR10V1Q8NGI7 309 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 OR2T10Q8NGZ9 312 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 CT45A3Q8NHU0 189 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 MRPL30Q8TCC3 161 aaKnown RBP9.85□□□□□ -0.83
CPSF4-208ENST00000452047 CHPT1Q8WUD6 406 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 CST11Q9H112 138 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 TAF9BQ9HBM6 251 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 RAB9BQ9NP90 201 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 PLSCR3Q9NRY6 295 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 NECAP2Q9NVZ3 263 aa9.85□□□□□ -0.83
CPSF4-208ENST00000452047 LINC01548A6NM66 108 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 SERPINE3A8MV23 424 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 ZNF736B4DX44 427 aaPredicted RBP9.84□□□□□ -0.83
CPSF4-208ENST00000452047 TXNL1O43396 289 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 MPIG6BO95866 241 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 UCHL1P09936 223 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 CHATP28329 748 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 RPL23AP62750 156 aaKnown RBP9.84□□□□□ -0.83
CPSF4-208ENST00000452047 QRFPP83859 136 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 UNC119Q13432 240 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 GNMTQ14749 295 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 MED22Q15528 200 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 RBM48Q5RL73 367 aaKnown RBP9.84□□□□□ -0.83
CPSF4-208ENST00000452047 FOXB2Q5VYV0 432 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 STEAP3Q658P3 488 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 OR10K2Q6IF99 312 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 ETV3LQ6ZN32 361 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 C5orf24Q7Z6I8 188 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 STPG2Q8N412 459 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 RBMXL1Q96E39 390 aaKnown RBP9.84□□□□□ -0.83
CPSF4-208ENST00000452047 ABCG5Q9H222 651 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 KCNK15Q9H427 330 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 LIN7CQ9NUP9 197 aaKnown RBP9.84□□□□□ -0.83
CPSF4-208ENST00000452047 AURKAIP1Q9NWT8 199 aaPredicted RBP9.84□□□□□ -0.83
CPSF4-208ENST00000452047 SCN3BQ9NY72 215 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 LINC00527Q9UJ94 153 aa9.84□□□□□ -0.83
CPSF4-208ENST00000452047 NCBP2LA6PVI3 153 aaKnown RBP9.83□□□□□ -0.84
CPSF4-208ENST00000452047 SLC22A1O15245 554 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 LANCL1O43813 399 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 MOSP00540 346 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 SRMP19623 302 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 MYF6P23409 242 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 GPR12P47775 334 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 RPS27AP62979 156 aaKnown RBP9.83□□□□□ -0.84
CPSF4-208ENST00000452047 MORN2Q502X0 79 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 HSD17B12Q53GQ0 312 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 NKAPLQ5M9Q1 402 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 LIPKQ5VXJ0 399 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 GLT8D1Q68CQ7 371 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 OR2W3Q7Z3T1 314 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 CEACAM19Q7Z692 300 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 ODF3L1Q8IXM7 274 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 FAM71E2Q8N5Q1 922 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 LINC00482Q8N8I6 264 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 SULT4A1Q9BR01 284 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 TM2D1Q9BX74 207 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 TMEM59Q9BXS4 323 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 ANKRD60Q9BZ19 345 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 DUSP21Q9H596 190 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 OR2S2Q9NQN1 319 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 JPT1Q9UK76 154 aa9.83□□□□□ -0.84
CPSF4-208ENST00000452047 TMEM14DPA8MWL7 114 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 AP4M1O00189 453 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 HTR2CP28335 458 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 PPP1CCP36873 323 aaKnown RBP9.82□□□□□ -0.84
CPSF4-208ENST00000452047 HTD2P86397 168 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 LSAMPQ13449 338 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 TPBGQ13641 420 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 HMGN3Q15651 99 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 TMEM91Q6ZNR0 172 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 C18orf65Q6ZTR6 163 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 C6orf201Q7Z4U5 140 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 FOXRED2Q8IWF2 684 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 COMMD1Q8N668 190 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 OR8H1Q8NGG4 311 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 OR52L2PQ8NGH6 319 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 KCNG3Q8TAE7 436 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 UFD1Q92890 307 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 RCC1LQ96I51 464 aaKnown RBP9.82□□□□□ -0.84
CPSF4-208ENST00000452047 NEDD4LQ96PU5 975 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 S1PR3Q99500 378 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 GFI1Q99684 422 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 NICN1Q9BSH3 213 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 ABHD14AQ9BUJ0 271 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 KCNIP1Q9NZI2 227 aa9.82□□□□□ -0.84
CPSF4-208ENST00000452047 A0A0A6YYD4 124 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 BPNT1O95861 308 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 NAPSAO96009 420 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 SLC6A1P30531 599 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 THBS3P49746 956 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 F2RL1P55085 397 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 RPS25P62851 125 aaKnown RBP9.81□□□□□ -0.84
CPSF4-208ENST00000452047 SLC35B1P78383 322 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 LY6G6FQ5SQ64 297 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 C8orf86Q6ZUL3 223 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 MRPL41Q8IXM3 137 aaKnown RBP9.81□□□□□ -0.84
CPSF4-208ENST00000452047 SVOPQ8N4V2 548 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 OR51D1Q8NGF3 324 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 OR6M1Q8NGM8 313 aa9.81□□□□□ -0.84
CPSF4-208ENST00000452047 MRAPQ8TCY5 172 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms