RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 HLA-AP01891 365 aaKnown RBP8.28□□□□□ -1.08
CCDC171-203ENST00000449575 HOXB5P09067 269 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 HOXA5P20719 270 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 PSMB6P28072 239 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 CDX1P47902 265 aaPredicted RBP8.28□□□□□ -1.08
CCDC171-203ENST00000449575 GPM6AP51674 278 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 ZNF154Q13106 437 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 CLEC12BQ2HXU8 276 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 LYG2Q86SG7 212 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 C11orf53Q8IXP5 236 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 CIARTQ8N365 385 aaPredicted RBP8.28□□□□□ -1.08
CCDC171-203ENST00000449575 ZNF383Q8NA42 475 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 TMED6Q8WW62 240 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 THRSPQ92748 146 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 SLAMF9Q96A28 289 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 SPACA5Q96QH8 159 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 S100A13Q99584 98 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 COMMD4Q9H0A8 199 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 ATG5Q9H1Y0 275 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 HRH4Q9H3N8 390 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 CACFD1Q9UGQ2 172 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 TEP1Q99973 2627 aaKnown RBP8.28□□□□□ -1.08
CCDC171-203ENST00000449575 IGKV1-27A0A075B6S5 117 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 TRBV6-7A0A0A0MS04 114 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 TSTD3H0UI37 97 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 PGAM2P15259 253 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 PLCXD3Q63HM9 321 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 FAHD2BQ6P2I3 314 aaPredicted RBP8.27□□□□□ -1.09
CCDC171-203ENST00000449575 THNSL2Q86YJ6 484 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 ZDHHC23Q8IYP9 409 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 OR8S1Q8NH09 359 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 GPX8Q8TED1 209 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 TSEN15Q8WW01 171 aaKnown RBP8.27□□□□□ -1.09
CCDC171-203ENST00000449575 FAHD2AQ96GK7 314 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 SEC22AQ96IW7 307 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 KIRREL1Q96J84 757 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 NCOR1P1Q9H4R4 102 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 GAR1Q9NY12 217 aaKnown RBP8.27□□□□□ -1.09
CCDC171-203ENST00000449575 FAM96BQ9Y3D0 163 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 TRAV18A0A075B6X5 111 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 LY86O95711 162 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 CYB5R3P00387 301 aaPredicted RBP8.27□□□□□ -1.09
CCDC171-203ENST00000449575 AMY2AP04746 511 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 HIST1H1BP16401 226 aaKnown RBP8.27□□□□□ -1.09
CCDC171-203ENST00000449575 CFPP27918 469 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 CD200P41217 278 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 PKIAP61925 76 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 ATPAF1Q5TC12 328 aaPredicted RBP8.27□□□□□ -1.09
CCDC171-203ENST00000449575 CRIP3Q6Q6R5 217 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 BATF2Q8N1L9 274 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 ARRDC1Q8N5I2 433 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 OR56B1Q8NGI3 324 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 OR51A2Q8NGJ7 313 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 DCUN1D4Q92564 292 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 SEH1LQ96EE3 360 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 C2orf88Q9BSF0 95 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 BPESC1Q9GZL8 116 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 PPP1R3CQ9UQK1 317 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 MPC1Q9Y5U8 109 aa8.27□□□□□ -1.09
CCDC171-203ENST00000449575 TRBV5-5A0A0J9YX44 114 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 ZNF732B4DXR9 585 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 RHBDL1O75783 438 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 RD3LP0DJH9 198 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 TNFSF4P23510 183 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 MAS1LP35410 378 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 MEF2DQ14814 521 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 RHEBQ15382 184 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 CEACAM21Q3KPI0 293 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 AKIRIN2Q53H80 203 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 CALHM1Q8IU99 346 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 COMMD1Q8N668 190 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 OR13C9Q8NGT0 318 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 GPR148Q8TDV2 347 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 C10orf105Q8TEF2 133 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 MITD1Q8WV92 249 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 FAM168AQ92567 244 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 RDH5Q92781 318 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 TMEM106AQ96A25 262 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 DIRC2Q96SL1 478 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 CHST5Q9GZS9 411 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 DHDHQ9UQ10 334 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 A0A0B4J2A0 478 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 FAM230AA0A1W2PPH8 454 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 C7orf77A4D0Y5 90 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 A6NLC8 198 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 DHRS7CA6NNS2 312 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 CDIPTO14735 213 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 ERCC1P07992 297 aaPredicted RBP8.26□□□□□ -1.09
CCDC171-203ENST00000449575 PYY3Q5JQD4 70 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 SLC25A42Q86VD7 318 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 ZDHHC22Q8N966 263 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 SCCPDHQ8NBX0 429 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 PRRT1Q99946 306 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 RSRP1Q9BUV0 290 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 NMES1Q9C002 83 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 SELENOIQ9C0D9 397 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 PARP11Q9NR21 331 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 CYTL1Q9NRR1 136 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 TAS2R4Q9NYW5 299 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 SHPKQ9UHJ6 478 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms