RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 MORN2Q502X0 79 aa16.36■□□□□ 0.21
SDC1-205ENST00000447124 ETV3LQ6ZN32 361 aa16.36■□□□□ 0.21
SDC1-205ENST00000447124 SLC35E3Q7Z769 313 aa16.36■□□□□ 0.21
SDC1-205ENST00000447124 TGIF2LXQ8IUE1 241 aa16.36■□□□□ 0.21
SDC1-205ENST00000447124 OR52L2PQ8NGH6 319 aa16.36■□□□□ 0.21
SDC1-205ENST00000447124 CHPT1Q8WUD6 406 aa16.36■□□□□ 0.21
SDC1-205ENST00000447124 THRSPQ92748 146 aa16.36■□□□□ 0.21
SDC1-205ENST00000447124 TMED9Q9BVK6 235 aa16.36■□□□□ 0.21
SDC1-205ENST00000447124 MND1Q9BWT6 205 aa16.36■□□□□ 0.21
SDC1-205ENST00000447124 GHRLQ9UBU3 117 aa16.36■□□□□ 0.21
SDC1-205ENST00000447124 F2RL1P55085 397 aa16.35■□□□□ 0.21
SDC1-205ENST00000447124 AQP4P55087 323 aa16.35■□□□□ 0.21
SDC1-205ENST00000447124 RPL23AP62750 156 aaKnown RBP16.35■□□□□ 0.21
SDC1-205ENST00000447124 GNMTQ14749 295 aa16.35■□□□□ 0.21
SDC1-205ENST00000447124 CEACAM19Q7Z692 300 aa16.35■□□□□ 0.21
SDC1-205ENST00000447124 STPG2Q8N412 459 aa16.35■□□□□ 0.21
SDC1-205ENST00000447124 MRAPQ8TCY5 172 aa16.35■□□□□ 0.21
SDC1-205ENST00000447124 SULT4A1Q9BR01 284 aa16.35■□□□□ 0.21
SDC1-205ENST00000447124 ABCG5Q9H222 651 aa16.35■□□□□ 0.21
SDC1-205ENST00000447124 VCXQ9H320 206 aa16.35■□□□□ 0.21
SDC1-205ENST00000447124 OR2S2Q9NQN1 319 aa16.35■□□□□ 0.21
SDC1-205ENST00000447124 MOSP00540 346 aa16.34■□□□□ 0.21
SDC1-205ENST00000447124 SRMP19623 302 aa16.34■□□□□ 0.21
SDC1-205ENST00000447124 GPR12P47775 334 aa16.34■□□□□ 0.21
SDC1-205ENST00000447124 SLC35A2P78381 396 aa16.34■□□□□ 0.21
SDC1-205ENST00000447124 STEAP3Q658P3 488 aa16.34■□□□□ 0.21
SDC1-205ENST00000447124 OR2W3Q7Z3T1 314 aa16.34■□□□□ 0.21
SDC1-205ENST00000447124 LINC00482Q8N8I6 264 aa16.34■□□□□ 0.21
SDC1-205ENST00000447124 PHYHIPQ92561 330 aa16.34■□□□□ 0.21
SDC1-205ENST00000447124 S1PR3Q99500 378 aa16.34■□□□□ 0.21
SDC1-205ENST00000447124 FAAP24Q9BTP7 215 aa16.34■□□□□ 0.21
SDC1-205ENST00000447124 KCNK15Q9H427 330 aa16.34■□□□□ 0.21
SDC1-205ENST00000447124 CHATP28329 748 aa16.33■□□□□ 0.2
SDC1-205ENST00000447124 HTR2CP28335 458 aa16.33■□□□□ 0.2
SDC1-205ENST00000447124 QRFPP83859 136 aa16.33■□□□□ 0.2
SDC1-205ENST00000447124 UNC119Q13432 240 aa16.33■□□□□ 0.2
SDC1-205ENST00000447124 MED22Q15528 200 aa16.33■□□□□ 0.2
SDC1-205ENST00000447124 TMEM30BQ3MIR4 351 aa16.33■□□□□ 0.2
SDC1-205ENST00000447124 NKAPLQ5M9Q1 402 aa16.33■□□□□ 0.2
SDC1-205ENST00000447124 RBM48Q5RL73 367 aaKnown RBP16.33■□□□□ 0.2
SDC1-205ENST00000447124 GLT8D1Q68CQ7 371 aa16.33■□□□□ 0.2
SDC1-205ENST00000447124 TRAT1Q6PIZ9 186 aa16.33■□□□□ 0.2
SDC1-205ENST00000447124 MRPL41Q8IXM3 137 aaKnown RBP16.33■□□□□ 0.2
SDC1-205ENST00000447124 ODF3L1Q8IXM7 274 aa16.33■□□□□ 0.2
SDC1-205ENST00000447124 CST11Q9H112 138 aa16.33■□□□□ 0.2
SDC1-205ENST00000447124 DUSP21Q9H596 190 aa16.33■□□□□ 0.2
SDC1-205ENST00000447124 RAB9BQ9NP90 201 aa16.33■□□□□ 0.2
SDC1-205ENST00000447124 ZFP57Q9NU63 452 aa16.33■□□□□ 0.2
SDC1-205ENST00000447124 LIN7CQ9NUP9 197 aaKnown RBP16.33■□□□□ 0.2
SDC1-205ENST00000447124 SCN3BQ9NY72 215 aa16.33■□□□□ 0.2
SDC1-205ENST00000447124 UCHL1P09936 223 aa16.32■□□□□ 0.2
SDC1-205ENST00000447124 UBBP0CG47 229 aa16.32■□□□□ 0.2
SDC1-205ENST00000447124 THBS3P49746 956 aa16.32■□□□□ 0.2
SDC1-205ENST00000447124 KRTAP10-11P60412 298 aa16.32■□□□□ 0.2
SDC1-205ENST00000447124 RPS27AP62979 156 aaKnown RBP16.32■□□□□ 0.2
SDC1-205ENST00000447124 TMEM91Q6ZNR0 172 aa16.32■□□□□ 0.2
SDC1-205ENST00000447124 C6orf201Q7Z4U5 140 aa16.32■□□□□ 0.2
SDC1-205ENST00000447124 FOXRED2Q8IWF2 684 aa16.32■□□□□ 0.2
SDC1-205ENST00000447124 TMEM203Q969S6 136 aa16.32■□□□□ 0.2
SDC1-205ENST00000447124 GFI1Q99684 422 aa16.32■□□□□ 0.2
SDC1-205ENST00000447124 NICN1Q9BSH3 213 aa16.32■□□□□ 0.2
SDC1-205ENST00000447124 KCNIP1Q9NZI2 227 aa16.32■□□□□ 0.2
SDC1-205ENST00000447124 A0A0A6YYD4 124 aa16.31■□□□□ 0.2
SDC1-205ENST00000447124 TMEM14DPA8MWL7 114 aa16.31■□□□□ 0.2
SDC1-205ENST00000447124 SLC22A1O15245 554 aa16.31■□□□□ 0.2
SDC1-205ENST00000447124 LANCL1O43813 399 aa16.31■□□□□ 0.2
SDC1-205ENST00000447124 PPP1CCP36873 323 aaKnown RBP16.31■□□□□ 0.2
SDC1-205ENST00000447124 TPBGQ13641 420 aa16.31■□□□□ 0.2
SDC1-205ENST00000447124 HSD17B12Q53GQ0 312 aa16.31■□□□□ 0.2
SDC1-205ENST00000447124 LIPKQ5VXJ0 399 aa16.31■□□□□ 0.2
SDC1-205ENST00000447124 C8orf86Q6ZUL3 223 aa16.31■□□□□ 0.2
SDC1-205ENST00000447124 ZNF554Q86TJ5 538 aa16.31■□□□□ 0.2
SDC1-205ENST00000447124 FAM71E2Q8N5Q1 922 aa16.31■□□□□ 0.2
SDC1-205ENST00000447124 RCC1LQ96I51 464 aaKnown RBP16.31■□□□□ 0.2
SDC1-205ENST00000447124 RITA1Q96K30 269 aa16.31■□□□□ 0.2
SDC1-205ENST00000447124 NEDD4LQ96PU5 975 aa16.31■□□□□ 0.2
SDC1-205ENST00000447124 HSPB9Q9BQS6 159 aa16.31■□□□□ 0.2
SDC1-205ENST00000447124 TM2D1Q9BX74 207 aa16.31■□□□□ 0.2
SDC1-205ENST00000447124 AP4M1O00189 453 aa16.3■□□□□ 0.2
SDC1-205ENST00000447124 YPEL1O60688 119 aa16.3■□□□□ 0.2
SDC1-205ENST00000447124 SLC35B1P78383 322 aa16.3■□□□□ 0.2
SDC1-205ENST00000447124 HTD2P86397 168 aa16.3■□□□□ 0.2
SDC1-205ENST00000447124 LSAMPQ13449 338 aa16.3■□□□□ 0.2
SDC1-205ENST00000447124 HMGN3Q15651 99 aa16.3■□□□□ 0.2
SDC1-205ENST00000447124 PNLIPRP3Q17RR3 467 aa16.3■□□□□ 0.2
SDC1-205ENST00000447124 LCNL1Q6ZST4 164 aa16.3■□□□□ 0.2
SDC1-205ENST00000447124 COMMD1Q8N668 190 aa16.3■□□□□ 0.2
SDC1-205ENST00000447124 YPEL2Q96QA6 119 aa16.3■□□□□ 0.2
SDC1-205ENST00000447124 RASL11BQ9BPW5 248 aa16.3■□□□□ 0.2
SDC1-205ENST00000447124 TMEM59Q9BXS4 323 aa16.3■□□□□ 0.2
SDC1-205ENST00000447124 JPT1Q9UK76 154 aa16.3■□□□□ 0.2
SDC1-205ENST00000447124 DNAH9Q9NYC9 4486 aa16.29■□□□□ 0.2
SDC1-205ENST00000447124 K7EIL1 84 aa16.29■□□□□ 0.2
SDC1-205ENST00000447124 TXNL1O43396 289 aa16.29■□□□□ 0.2
SDC1-205ENST00000447124 MYF6P23409 242 aa16.29■□□□□ 0.2
SDC1-205ENST00000447124 MYCNOSP40205 109 aa16.29■□□□□ 0.2
SDC1-205ENST00000447124 RPS25P62851 125 aaKnown RBP16.29■□□□□ 0.2
SDC1-205ENST00000447124 LY6G6FQ5SQ64 297 aa16.29■□□□□ 0.2
SDC1-205ENST00000447124 OR8H1Q8NGG4 311 aa16.29■□□□□ 0.2
SDC1-205ENST00000447124 KCNG3Q8TAE7 436 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms