RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 H2BFSP57053 126 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 PIGPP57054 158 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 MRPS11P82912 194 aaKnown RBP12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 COL10A1Q03692 680 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 FGL1Q08830 312 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 DCAF12L2Q5VW00 463 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 GSG1LQ6UXU4 331 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 C9orf62Q8N4C0 152 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 ASCC1Q8N9N2 400 aaKnown RBP12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 OR10J5Q8NHC4 309 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 GRPEL2Q8TAA5 225 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 CCL17Q92583 94 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 ERGIC1Q969X5 290 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 TMEM246Q9BRR3 403 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 CABLES2Q9BTV7 478 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 DNTTIP1Q9H147 329 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 GSX1Q9H4S2 264 aaPredicted RBP12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 NARFLQ9H6Q4 476 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 PCDHB10Q9UN67 800 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 DYSFO75923 2080 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 ABCA1O95477 2261 aa12.12□□□□□ -0.47
TNFRSF1A-204ENST00000440083 C5orf51A6NDU8 294 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 NDUFS8O00217 210 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 SNAPC5O75971 98 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 ZNF205O95201 554 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 TNFRSF1AP19438 455 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 S100GP29377 79 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 HOXA4Q00056 320 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 PHLDA2Q53GA4 152 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 SLC35E4Q6ICL7 350 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 FAM185AQ8N0U4 392 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 KIRREL1Q96J84 757 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 RSRP1Q9BUV0 290 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 SLA2Q9H6Q3 261 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 NAA60Q9H7X0 242 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 RAB18Q9NP72 206 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 PLSCR3Q9NRY6 295 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 RNF7Q9UBF6 113 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 KCNIP3Q9Y2W7 256 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 BOLA1Q9Y3E2 137 aa12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 SONP18583 2426 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 NSD1Q96L73 2696 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-204ENST00000440083 PSPNO60542 156 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 HLA-GP17693 338 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 RCC1P18754 421 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 IL2RGP31785 369 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 PRDX2P32119 198 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 CD80P33681 288 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 GPR6P46095 362 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 GABRA2P47869 451 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 KRTAP1-1Q07627 177 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 HMGN3Q15651 99 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 HFEQ30201 348 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 LY6G6FQ5SQ64 297 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 C6orf183Q5T699 404 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 GAPTQ8N292 157 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 GCSAMQ8N6F7 178 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 SECTM1Q8WVN6 248 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 RTN4IP1Q8WWV3 396 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 IL1F10Q8WWZ1 152 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 SLC5A7Q9GZV3 580 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 METTL8Q9H825 291 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 SEBOXQ9HB31 216 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 GCM1Q9NP62 436 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 SLC2A9Q9NRM0 540 aa12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 ANK3Q12955 4377 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1A-204ENST00000440083 SETD2Q9BYW2 2564 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 FXYD6-FXYD2A0A087WZ82 144 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 C13orf42A0A1B0GVH6 325 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 OOEPA6NGQ2 149 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 LRRC30A6NM36 301 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 GPR31O00270 319 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 HSPA12AO43301 675 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 CYB5R3P00387 301 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 PSG2P11465 335 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 USF1P22415 310 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 OR3A1P47881 315 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 SUPT4H1P63272 117 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 HERPUD1Q15011 391 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 ANKRD55Q3KP44 614 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 KRBOX4Q5JUW0 171 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 TRAT1Q6PIZ9 186 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 Q71RC1 249 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 PRR18Q8N4B5 295 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 OR11H4Q8NGC9 324 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 SUCNR1Q9BXA5 334 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 MBNL3Q9NUK0 354 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 TMEM106BQ9NUM4 274 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 KIF25Q9UIL4 384 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 PPP1R3CQ9UQK1 317 aa12.09□□□□□ -0.47
TNFRSF1A-204ENST00000440083 IGHV3OR15-7A0A075B7D8 119 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 TRBV6-7A0A0A0MS04 114 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 TRAV39A0A0B4J263 110 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 IGKV1-6A0A0C4DH72 117 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 DBX1A6NMT0 343 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 NPIPB11E5RHQ5 1161 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 G3V3Q6 166 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 TSC22D2O75157 780 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 TUSC2O75896 110 aa12.08□□□□□ -0.48
TNFRSF1A-204ENST00000440083 LY6G6DO95868 133 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms