RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 IGHV2-26A0A0B4J1V2 119 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 TRAV40A0A0B4J280 105 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 MEIS3P1A6NDR6 274 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 HSPA12AO43301 675 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 MMP23AO75900 390 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 FSHBP01225 129 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 CSF1P09603 554 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 NFYBP25208 207 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 PRRX1P54821 245 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 DGCR2P98153 550 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 SCGB2A2Q13296 93 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 ABHD12Q8N2K0 398 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 BEND2Q8NDZ0 799 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 OR10J5Q8NHC4 309 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 EDARADDQ8WWZ3 215 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 MAFIPQ8WZ33 124 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 LHX4Q969G2 390 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 CREB3L1Q96BA8 519 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 SMR3AQ99954 134 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 KLK11Q9UBX7 282 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 CDC42EP3Q9UKI2 254 aa15.03■□□□□ -0
HDAC6-208ENST00000438518 CENPVL3A0A0U1RRI6 287 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 RNASEK-C17orf49H0YIS7 233 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 AVPP01185 164 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 CD40LGP29965 261 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 GDNFP39905 211 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 TAS2R19P59542 299 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 ZNF846Q147U1 533 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 HERPUD1Q15011 391 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 LTC4SQ16873 150 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 MORN2Q502X0 79 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 MIDNQ504T8 468 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 FAM120AOSQ5T036 256 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 ZNF626Q68DY1 528 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 C1orf229Q6ZS94 237 aaPredicted RBP15.02■□□□□ -0
HDAC6-208ENST00000438518 MFSD4AQ8N468 514 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 LINC00311Q8N616 119 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 TMEM229BQ8NBD8 167 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 THAP7Q9BT49 309 aaPredicted RBP15.02■□□□□ -0
HDAC6-208ENST00000438518 SUCNR1Q9BXA5 334 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 GHITMQ9H3K2 345 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 SLC23A1Q9UHI7 598 aa15.02■□□□□ -0
HDAC6-208ENST00000438518 TBL2Q9Y4P3 447 aaKnown RBP15.02■□□□□ -0
HDAC6-208ENST00000438518 AMMECR1Q9Y4X0 333 aaPredicted RBP15.02■□□□□ -0
HDAC6-208ENST00000438518 MED13LQ71F56 2210 aa15.02□□□□□ -0.01
HDAC6-208ENST00000438518 WNK2Q9Y3S1 2297 aa15.01□□□□□ -0.01
HDAC6-208ENST00000438518 IGKV1D-8A0A087WSZ0 117 aa15.01□□□□□ -0.01
HDAC6-208ENST00000438518 IGHV1-69DA0A0B4J2H0 117 aa15.01□□□□□ -0.01
HDAC6-208ENST00000438518 IGKV1-6A0A0C4DH72 117 aa15.01□□□□□ -0.01
HDAC6-208ENST00000438518 ZNF736B4DX44 427 aaPredicted RBP15.01□□□□□ -0.01
HDAC6-208ENST00000438518 TOR1AO14656 332 aa15.01□□□□□ -0.01
HDAC6-208ENST00000438518 IGLV1-47P01700 117 aa15.01□□□□□ -0.01
HDAC6-208ENST00000438518 IGHV1-69P01742 117 aa15.01□□□□□ -0.01
HDAC6-208ENST00000438518 OR3A3P47888 321 aa15.01□□□□□ -0.01
HDAC6-208ENST00000438518 AP3S2P59780 193 aa15.01□□□□□ -0.01
HDAC6-208ENST00000438518 CDK10Q15131 360 aa15.01□□□□□ -0.01
HDAC6-208ENST00000438518 PNKDQ8N490 385 aa15.01□□□□□ -0.01
HDAC6-208ENST00000438518 OR5H2Q8NGV7 314 aa15.01□□□□□ -0.01
HDAC6-208ENST00000438518 UBALD1Q8TB05 177 aa15.01□□□□□ -0.01
HDAC6-208ENST00000438518 GINS4Q9BRT9 223 aa15.01□□□□□ -0.01
HDAC6-208ENST00000438518 CCDC32Q9BV29 185 aa15.01□□□□□ -0.01
HDAC6-208ENST00000438518 NUP50Q9UKX7 468 aa15.01□□□□□ -0.01
HDAC6-208ENST00000438518 ZANQ9Y493 2812 aa15.01□□□□□ -0.01
HDAC6-208ENST00000438518 ODF3BA8MYP8 253 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 J3QR06 171 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 BET1O15155 118 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 COX7A1P24310 79 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 CEACAM6P40199 344 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 RAB7AP51149 207 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 PPP5CP53041 499 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 IGSF11Q5DX21 431 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 VAX1Q5SQQ9 334 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 MINOS1Q5TGZ0 78 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 HCP5Q6MZN7 132 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 C9orf139Q6ZV77 190 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 OVCH2Q7RTZ1 564 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 OR2AK2Q8NG84 335 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 OR52L2PQ8NGH6 319 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 ZNF69Q9UC07 566 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 PSG11Q9UQ72 335 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 MINOS1-NBL1R4GNA1 71 aa15□□□□□ -0.01
HDAC6-208ENST00000438518 IGHV3-43A0A0B4J1X8 118 aa14.99□□□□□ -0.01
HDAC6-208ENST00000438518 ANKRD20A5PA0PJZ0 165 aa14.99□□□□□ -0.01
HDAC6-208ENST00000438518 IGHV3-43DP0DP04 118 aa14.99□□□□□ -0.01
HDAC6-208ENST00000438518 IL3RAP26951 378 aa14.99□□□□□ -0.01
HDAC6-208ENST00000438518 LGALS4P56470 323 aa14.99□□□□□ -0.01
HDAC6-208ENST00000438518 DYRK1AQ13627 763 aa14.99□□□□□ -0.01
HDAC6-208ENST00000438518 MEF2DQ14814 521 aa14.99□□□□□ -0.01
HDAC6-208ENST00000438518 HLA-DRB5Q30154 266 aa14.99□□□□□ -0.01
HDAC6-208ENST00000438518 RNASE12Q5GAN4 147 aaKnown RBP14.99□□□□□ -0.01
HDAC6-208ENST00000438518 RNASE10Q5GAN6 216 aaKnown RBP14.99□□□□□ -0.01
HDAC6-208ENST00000438518 KLF17Q5JT82 389 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-208ENST00000438518 SLC25A48Q6ZT89 311 aaKnown RBP14.99□□□□□ -0.01
HDAC6-208ENST00000438518 LYSMD2Q8IV50 215 aa14.99□□□□□ -0.01
HDAC6-208ENST00000438518 ARRDC1Q8N5I2 433 aa14.99□□□□□ -0.01
HDAC6-208ENST00000438518 ZNF439Q8NDP4 499 aa14.99□□□□□ -0.01
HDAC6-208ENST00000438518 TRIM63Q969Q1 353 aa14.99□□□□□ -0.01
HDAC6-208ENST00000438518 ABHD14AQ9BUJ0 271 aa14.99□□□□□ -0.01
HDAC6-208ENST00000438518 MMP28Q9H239 520 aa14.99□□□□□ -0.01
HDAC6-208ENST00000438518 NPFFO15130 113 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms