RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 SCAF4O95104 1147 aaKnown RBP10.01□□□□□ -0.81
CD44-209ENST00000433892 CNOT4O95628 575 aaKnown RBP10.01□□□□□ -0.81
CD44-209ENST00000433892 ZNF806P0C7X5 589 aa10.01□□□□□ -0.81
CD44-209ENST00000433892 IAPPP10997 89 aa10.01□□□□□ -0.81
CD44-209ENST00000433892 NQO2P16083 231 aa10.01□□□□□ -0.81
CD44-209ENST00000433892 TAGLN2P37802 199 aaKnown RBP10.01□□□□□ -0.81
CD44-209ENST00000433892 SLC10A1Q14973 349 aa10.01□□□□□ -0.81
CD44-209ENST00000433892 OR8G1Q15617 311 aa10.01□□□□□ -0.81
CD44-209ENST00000433892 WDR86Q86TI4 376 aa10.01□□□□□ -0.81
CD44-209ENST00000433892 CLDND2Q8NHS1 167 aa10.01□□□□□ -0.81
CD44-209ENST00000433892 BCL2L2Q92843 193 aaPredicted RBP10.01□□□□□ -0.81
CD44-209ENST00000433892 BCL2L14Q9BZR8 327 aa10.01□□□□□ -0.81
CD44-209ENST00000433892 UNKLQ9H9P5 680 aaKnown RBP10.01□□□□□ -0.81
CD44-209ENST00000433892 TRAPPC2LQ9UL33 140 aa10.01□□□□□ -0.81
CD44-209ENST00000433892 KCNS2Q9ULS6 477 aa10.01□□□□□ -0.81
CD44-209ENST00000433892 WSB1Q9Y6I7 421 aa10.01□□□□□ -0.81
CD44-209ENST00000433892 DFFBO76075 338 aa10□□□□□ -0.81
CD44-209ENST00000433892 OR2H2O95918 312 aa10□□□□□ -0.81
CD44-209ENST00000433892 IFNA5P01569 189 aa10□□□□□ -0.81
CD44-209ENST00000433892 CELA3BP08861 270 aa10□□□□□ -0.81
CD44-209ENST00000433892 METTL15P1P0C7V9 234 aa10□□□□□ -0.81
CD44-209ENST00000433892 UBE2KP61086 200 aa10□□□□□ -0.81
CD44-209ENST00000433892 FBXW9Q5XUX1 488 aa10□□□□□ -0.81
CD44-209ENST00000433892 ZNF429Q86V71 674 aa10□□□□□ -0.81
CD44-209ENST00000433892 YPEL4Q96NS1 127 aa10□□□□□ -0.81
CD44-209ENST00000433892 RAB40CQ96S21 281 aa10□□□□□ -0.81
CD44-209ENST00000433892 RSG1Q9BU20 258 aa10□□□□□ -0.81
CD44-209ENST00000433892 MMP24Q9Y5R2 645 aa10□□□□□ -0.81
CD44-209ENST00000433892 KIAA2026Q5HYC2 2103 aa10□□□□□ -0.81
CD44-209ENST00000433892 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10□□□□□ -0.81
CD44-209ENST00000433892 WDR1O75083 606 aa10□□□□□ -0.81
CD44-209ENST00000433892 IGKV1-5P01602 117 aa10□□□□□ -0.81
CD44-209ENST00000433892 IGHV2-5P01817 119 aa10□□□□□ -0.81
CD44-209ENST00000433892 HSPB1P04792 205 aaKnown RBP10□□□□□ -0.81
CD44-209ENST00000433892 OR8U8P0C7N1 319 aa10□□□□□ -0.81
CD44-209ENST00000433892 ZNF883P0CG24 379 aa10□□□□□ -0.81
CD44-209ENST00000433892 ERVS71-1P61550 626 aa10□□□□□ -0.81
CD44-209ENST00000433892 B2MP61769 119 aa10□□□□□ -0.81
CD44-209ENST00000433892 DLK1P80370 383 aa10□□□□□ -0.81
CD44-209ENST00000433892 ZNF506Q5JVG8 444 aa10□□□□□ -0.81
CD44-209ENST00000433892 HEPN1Q6WQI6 88 aa10□□□□□ -0.81
CD44-209ENST00000433892 SCCPDHQ8NBX0 429 aa10□□□□□ -0.81
CD44-209ENST00000433892 MUCL1Q96DR8 90 aa10□□□□□ -0.81
CD44-209ENST00000433892 MALSU1Q96EH3 234 aa10□□□□□ -0.81
CD44-209ENST00000433892 GP6Q9HCN6 339 aa10□□□□□ -0.81
CD44-209ENST00000433892 METTL1Q9UBP6 276 aaKnown RBP10□□□□□ -0.81
CD44-209ENST00000433892 KLF13Q9Y2Y9 288 aaPredicted RBP10□□□□□ -0.81
CD44-209ENST00000433892 KLRC4-KLRK1H3BQV0 150 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 CDIPTO14735 213 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 SYNGR2O43760 224 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 S100A8P05109 93 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 S100A9P06702 114 aaKnown RBP9.99□□□□□ -0.81
CD44-209ENST00000433892 SLC25A6P12236 298 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 SELEP16581 610 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 ARL16Q0P5N6 197 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 ZNF585BQ52M93 769 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 ZNF343Q6P1L6 599 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 ZNF497Q6ZNH5 498 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 RBMXL1Q96E39 390 aaKnown RBP9.99□□□□□ -0.81
CD44-209ENST00000433892 RTL8AQ9BWD3 113 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 OR2J1Q9GZK6 312 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 GNG13Q9P2W3 67 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 URGCP-MRPS24S4R325 110 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 DIDO1Q9BTC0 2240 aaKnown RBP9.99□□□□□ -0.81
CD44-209ENST00000433892 HBE1P02100 147 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 SMIM6P0DI80 62 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 MAS1LP35410 378 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 CEACAM6P40199 344 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 RPS10P46783 165 aaKnown RBP9.99□□□□□ -0.81
CD44-209ENST00000433892 RAB2AP61019 212 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 TBC1D28Q2M2D7 210 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 ALKBH6Q3KRA9 238 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 RNFT1Q5M7Z0 435 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 ATP1A1-AS1Q5TC04 95 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 MDS2Q8NDY4 140 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 NANOS1Q8WY41 292 aaKnown RBP9.99□□□□□ -0.81
CD44-209ENST00000433892 WDYHV1Q96HA8 205 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 VSIRQ9H7M9 311 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 RPRMQ9NS64 109 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 PSENENQ9NZ42 101 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 SPRR3Q9UBC9 169 aa9.99□□□□□ -0.81
CD44-209ENST00000433892 BOD1L1Q8NFC6 3051 aa9.98□□□□□ -0.81
CD44-209ENST00000433892 NPIPB11E5RHQ5 1161 aa9.98□□□□□ -0.81
CD44-209ENST00000433892 AP4M1O00189 453 aa9.98□□□□□ -0.81
CD44-209ENST00000433892 NXPH2O95156 264 aa9.98□□□□□ -0.81
CD44-209ENST00000433892 IFNA17P01571 189 aa9.98□□□□□ -0.81
CD44-209ENST00000433892 S100A12P80511 92 aa9.98□□□□□ -0.81
CD44-209ENST00000433892 LCN15Q6UWW0 184 aa9.98□□□□□ -0.81
CD44-209ENST00000433892 DPPA3Q6W0C5 159 aa9.98□□□□□ -0.81
CD44-209ENST00000433892 SCGB1C1Q8TD33 95 aa9.98□□□□□ -0.81
CD44-209ENST00000433892 LSM10Q969L4 123 aaKnown RBP9.98□□□□□ -0.81
CD44-209ENST00000433892 NIPSNAP3BQ9BS92 247 aa9.98□□□□□ -0.81
CD44-209ENST00000433892 OR14J1Q9UGF5 321 aa9.98□□□□□ -0.81
CD44-209ENST00000433892 LRP5LA4QPB2 252 aa9.98□□□□□ -0.81
CD44-209ENST00000433892 ZFP92A6NM28 416 aa9.98□□□□□ -0.81
CD44-209ENST00000433892 SMPD2O60906 423 aa9.98□□□□□ -0.81
CD44-209ENST00000433892 GRPP07492 148 aa9.98□□□□□ -0.81
CD44-209ENST00000433892 CD59P13987 128 aa9.98□□□□□ -0.81
CD44-209ENST00000433892 MDH2P40926 338 aaKnown RBP9.98□□□□□ -0.81
CD44-209ENST00000433892 CEBPDP49716 269 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms