RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 MRPL13Q9BYD1 178 aaKnown RBP13.78□□□□□ -0.2
C9orf3-206ENST00000428313 RNF114Q9Y508 228 aa13.78□□□□□ -0.2
C9orf3-206ENST00000428313 RBM7Q9Y580 266 aaKnown RBP13.78□□□□□ -0.2
C9orf3-206ENST00000428313 IGLC7A0M8Q6 106 aa13.77□□□□□ -0.21
C9orf3-206ENST00000428313 K7ERU9 68 aa13.77□□□□□ -0.21
C9orf3-206ENST00000428313 NXPH3O95157 252 aa13.77□□□□□ -0.21
C9orf3-206ENST00000428313 RPS21P63220 83 aaKnown RBP13.77□□□□□ -0.21
C9orf3-206ENST00000428313 ZNF468Q5VIY5 522 aaPredicted RBP13.77□□□□□ -0.21
C9orf3-206ENST00000428313 TMEM211Q6ICI0 200 aa13.77□□□□□ -0.21
C9orf3-206ENST00000428313 TAF15Q92804 592 aaKnown RBP eCLIP13.77□□□□□ -0.211e-6■■■■□ 22
C9orf3-206ENST00000428313 MRPL18Q9H0U6 180 aaKnown RBP13.77□□□□□ -0.21
C9orf3-206ENST00000428313 VSTM2BA6NLU5 285 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 H0Y980 276 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 FAHP16930 419 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 ARF6P62330 175 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 TLE3Q04726 772 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 VAMP3Q15836 100 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 SPIN3Q5JUX0 258 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 FAM180AQ6UWF9 173 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 PRR22Q8IZ63 422 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 SPSB1Q96BD6 273 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 CLN8Q9UBY8 286 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 MYO7BQ6PIF6 2116 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 CACNA1IQ9P0X4 2223 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 A0A1W2PRS3 328 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 IGKV1D-33P01593 117 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 IGKV1-33P01594 117 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 NBEAP1P0C6P0 100 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 APOBEC3AP31941 199 aaPredicted RBP13.76□□□□□ -0.21
C9orf3-206ENST00000428313 DLX2Q07687 328 aaPredicted RBP13.76□□□□□ -0.21
C9orf3-206ENST00000428313 ARL16Q0P5N6 197 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 ZIC4Q8N9L1 334 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 DYRK2Q92630 601 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 ADIPOR1Q96A54 375 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 SFRP2Q96HF1 295 aa13.76□□□□□ -0.21
C9orf3-206ENST00000428313 E9PLN8 166 aa13.75□□□□□ -0.21
C9orf3-206ENST00000428313 SERPINA7P05543 415 aa13.75□□□□□ -0.21
C9orf3-206ENST00000428313 CST6Q15828 149 aa13.75□□□□□ -0.21
C9orf3-206ENST00000428313 PSRC1Q6PGN9 363 aaPredicted RBP13.75□□□□□ -0.21
C9orf3-206ENST00000428313 HAPLN4Q86UW8 402 aa13.75□□□□□ -0.21
C9orf3-206ENST00000428313 SFTPA1Q8IWL2 248 aa13.75□□□□□ -0.21
C9orf3-206ENST00000428313 NRN1Q9NPD7 142 aa13.75□□□□□ -0.21
C9orf3-206ENST00000428313 SLC7A10Q9NS82 523 aa13.75□□□□□ -0.21
C9orf3-206ENST00000428313 LOC102725191A0A1B0GVB3 256 aa13.75□□□□□ -0.21
C9orf3-206ENST00000428313 MDFIC2A0A1B0GVS7 189 aa13.75□□□□□ -0.21
C9orf3-206ENST00000428313 RER1O15258 196 aa13.75□□□□□ -0.21
C9orf3-206ENST00000428313 PDE6DO43924 150 aa13.75□□□□□ -0.21
C9orf3-206ENST00000428313 HOXC12P31275 282 aa13.75□□□□□ -0.21
C9orf3-206ENST00000428313 ZNF818PQ6ZRF7 136 aa13.75□□□□□ -0.21
C9orf3-206ENST00000428313 ZNF321PQ8N8H1 164 aa13.75□□□□□ -0.21
C9orf3-206ENST00000428313 RNF24Q9Y225 148 aa13.75□□□□□ -0.21
C9orf3-206ENST00000428313 PIGLQ9Y2B2 252 aa13.75□□□□□ -0.21
C9orf3-206ENST00000428313 TBL2Q9Y4P3 447 aaKnown RBP13.75□□□□□ -0.21
C9orf3-206ENST00000428313 NOTCH4Q99466 2003 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 ATG2BQ96BY7 2078 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 TRAV34A0A0B4J273 112 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 NPPCP23582 126 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 CLDN18P56856 261 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 CLRN1P58418 232 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 LRRC10Q5BKY1 277 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 Q6ZS49 121 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 LHFPL4Q7Z7J7 247 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 SAXO1Q8IYX7 474 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 GAPTQ8N292 157 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 GATAD1Q8WUU5 269 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 TMEM234Q8WY98 164 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 TNFRSF14Q92956 283 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 VWCEQ96DN2 955 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 EMC6Q9BV81 110 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 PSENENQ9NZ42 101 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 TRBV9A0A0B4J1U6 114 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 C1QTNF9BB2RNN3 333 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 SH2D1BO14796 132 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 PAGE4O60829 102 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 HNRNPA1P09651 372 aaKnown RBP eCLIP13.74□□□□□ -0.21
C9orf3-206ENST00000428313 CBLN1P23435 193 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 S100A7P31151 101 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 PRRX1P54821 245 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 GAB4Q2WGN9 574 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 MUC15Q8N387 334 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 OR1E3Q8WZA6 343 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 UHRF2Q96PU4 802 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 OR4C12Q96R67 309 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 SLC25A22Q9H936 323 aa13.74□□□□□ -0.21
C9orf3-206ENST00000428313 C11orf94C9JXX5 98 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 SYNGR2O43760 224 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 POU2F2P09086 479 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 BMI1P35226 326 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 GABRA2P47869 451 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 CLDN17P56750 224 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 RPS18P62269 152 aaKnown RBP13.73□□□□□ -0.21
C9orf3-206ENST00000428313 SLC25A47Q6Q0C1 308 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 CADM4Q8NFZ8 388 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 KCNS1Q96KK3 526 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 A0A1W2PP55 124 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 C5orf63A6NC05 138 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 DPRXA6NFQ7 191 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 H0YIG0 161 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 DEGS1O15121 323 aa13.73□□□□□ -0.21
C9orf3-206ENST00000428313 GDF9O60383 454 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms