RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 ZNF474Q6S9Z5 364 aaPredicted RBP12.24□□□□□ -0.45
HLA-DPA1-242ENST00000419277 NUP37Q8NFH4 326 aa12.24□□□□□ -0.45
HLA-DPA1-242ENST00000419277 RNASE11Q8TAA1 199 aaKnown RBP12.24□□□□□ -0.45
HLA-DPA1-242ENST00000419277 C1QTNF6Q9BXI9 259 aa12.24□□□□□ -0.45
HLA-DPA1-242ENST00000419277 HEATR1Q9H583 2144 aaKnown RBP12.24□□□□□ -0.45
HLA-DPA1-242ENST00000419277 OR1A1Q9P1Q5 309 aa12.24□□□□□ -0.45
HLA-DPA1-242ENST00000419277 BTBD17A6NE02 478 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 A8MXE2 369 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 LGALS8O00214 317 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 PSPNO60542 156 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 GZMHP20718 246 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 CEACAM6P40199 344 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 GABRA2P47869 451 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 OR3A1P47881 315 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 ARHGDIBP52566 201 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 DPPA3Q6W0C5 159 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 NARS2Q96I59 477 aaKnown RBP12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 DIRC2Q96SL1 478 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 HIPK2Q9H2X6 1198 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 RNF115Q9Y4L5 304 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 MMP24Q9Y5R2 645 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 C12orf77C9JDV5 145 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 MGST3O14880 152 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 WISP2O76076 250 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 IGLV2-14P01704 120 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 APOC3P02656 99 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 GLI4P10075 376 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 TNFSF4P23510 183 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 AKR1C2P52895 323 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 CR1LQ2VPA4 569 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 KRBOX4Q5JUW0 171 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 FAM209AQ5JX71 171 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 BTNL8Q6UX41 500 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 ZNF66Q6ZN08 573 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 TMEM252Q8N6L7 170 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 BPIFCQ8NFQ6 507 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 OR51H1Q8NH63 302 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 CD300LFQ8TDQ1 290 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 LRRC29Q8WV35 223 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 SNX22Q96L94 193 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 JPT1Q9UK76 154 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 ZDHHC8Q9ULC8 765 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 KCNS2Q9ULS6 477 aa12.23□□□□□ -0.45
HLA-DPA1-242ENST00000419277 M0R1B8 84 aa12.22□□□□□ -0.45
HLA-DPA1-242ENST00000419277 SSSCA1O60232 199 aa12.22□□□□□ -0.45
HLA-DPA1-242ENST00000419277 PSG2P11465 335 aa12.22□□□□□ -0.45
HLA-DPA1-242ENST00000419277 TDGF1P3P51864 188 aa12.22□□□□□ -0.45
HLA-DPA1-242ENST00000419277 POLR2GP62487 172 aaKnown RBP eCLIP12.22□□□□□ -0.45
HLA-DPA1-242ENST00000419277 TMEM108Q6UXF1 575 aa12.22□□□□□ -0.45
HLA-DPA1-242ENST00000419277 DRAM1Q8N682 238 aa12.22□□□□□ -0.45
HLA-DPA1-242ENST00000419277 OR2Z1Q8NG97 314 aa12.22□□□□□ -0.45
HLA-DPA1-242ENST00000419277 TSNAXQ99598 290 aaKnown RBP12.22□□□□□ -0.45
HLA-DPA1-242ENST00000419277 HSD17B10Q99714 261 aaKnown RBP12.22□□□□□ -0.45
HLA-DPA1-242ENST00000419277 MSL2Q9HCI7 577 aa12.22□□□□□ -0.45
HLA-DPA1-242ENST00000419277 RNF150Q9ULK6 438 aa12.22□□□□□ -0.45
HLA-DPA1-242ENST00000419277 ARID1AO14497 2285 aa12.21□□□□□ -0.45
HLA-DPA1-242ENST00000419277 TOR1AO14656 332 aa12.21□□□□□ -0.45
HLA-DPA1-242ENST00000419277 ITGB1BP1O14713 200 aa12.21□□□□□ -0.45
HLA-DPA1-242ENST00000419277 SNAPINO95295 136 aa12.21□□□□□ -0.45
HLA-DPA1-242ENST00000419277 HBZP02008 142 aa12.21□□□□□ -0.45
HLA-DPA1-242ENST00000419277 OR8U9P0C7N5 309 aa12.21□□□□□ -0.45
HLA-DPA1-242ENST00000419277 ZNF83P51522 516 aa12.21□□□□□ -0.45
HLA-DPA1-242ENST00000419277 DVL1P1P54792 670 aaPredicted RBP12.21□□□□□ -0.45
HLA-DPA1-242ENST00000419277 COL10A1Q03692 680 aa12.21□□□□□ -0.45
HLA-DPA1-242ENST00000419277 MST1LQ2TV78 715 aa12.21□□□□□ -0.45
HLA-DPA1-242ENST00000419277 PRAMEF6Q5VXH4 476 aa12.21□□□□□ -0.45
HLA-DPA1-242ENST00000419277 Q6ZRG5 221 aa12.21□□□□□ -0.45
HLA-DPA1-242ENST00000419277 OR8U1Q8NH10 309 aa12.21□□□□□ -0.45
HLA-DPA1-242ENST00000419277 TMEM171Q8WVE6 324 aa12.21□□□□□ -0.45
HLA-DPA1-242ENST00000419277 COQ2Q96H96 371 aa12.21□□□□□ -0.45
HLA-DPA1-242ENST00000419277 UQCC1Q9NVA1 299 aa12.21□□□□□ -0.45
HLA-DPA1-242ENST00000419277 IL19Q9UHD0 177 aa12.21□□□□□ -0.45
HLA-DPA1-242ENST00000419277 CEP250Q9BV73 2442 aa12.21□□□□□ -0.46
HLA-DPA1-242ENST00000419277 TNFSF12O43508 249 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 ZNF737O75373 536 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 FBXO24O75426 580 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 PTAFRP25105 342 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 PRDX2P32119 198 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 SULT1A1P50225 295 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 UCNP55089 124 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 HBG1P69891 147 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 HBG2P69892 147 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 RBPJQ06330 500 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 PRR18Q8N4B5 295 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 LRRC46Q96FV0 321 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 MEGF10Q96KG7 1140 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 PBDC1Q9BVG4 233 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 SMIM3Q9BZL3 60 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 NKX6-2Q9C056 277 aaPredicted RBP12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 OR6C3Q9NZP0 311 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 SVILO95425 2214 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 A0A1B0GW64 132 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 FAM90A9PA6NNJ1 464 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 SYNGR2O43760 224 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 TSPAN15O95858 294 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 CD5P06127 495 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 LPAR6P43657 344 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 ZNF826PQ6ZT77 177 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 ZNF561Q8N587 486 aa12.2□□□□□ -0.46
HLA-DPA1-242ENST00000419277 KDF1Q8NAX2 398 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms