RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 OOSP1A8MZH6 123 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 MFNGO00587 321 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 RGS11O94810 467 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 IGHV3-43DP0DP04 118 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 TALDO1P37837 337 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 GNG10P50151 68 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 RORCP51449 518 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 ACTG1P63261 375 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 ARFRP1Q13795 201 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 LDLRAD2Q5SZI1 272 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 OLFML2AQ68BL7 652 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 OR10X1Q8NGY0 326 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 Q9N2K0 584 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 DIABLOQ9NR28 239 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 JPT1Q9UK76 154 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 VPREB3Q9UKI3 123 aa18.68■□□□□ 0.58
SMARCB1-205ENST00000417137 H3BUX3 64 aa18.67■□□□□ 0.58
SMARCB1-205ENST00000417137 RPL15P61313 204 aaKnown RBP18.67■□□□□ 0.58
SMARCB1-205ENST00000417137 MADCAM1Q13477 382 aa18.67■□□□□ 0.58
SMARCB1-205ENST00000417137 UTF1Q5T230 341 aa18.67■□□□□ 0.58
SMARCB1-205ENST00000417137 STEAP3Q658P3 488 aa18.67■□□□□ 0.58
SMARCB1-205ENST00000417137 CCDC144NLQ6NUI1 221 aa18.67■□□□□ 0.58
SMARCB1-205ENST00000417137 CLVS1Q8IUQ0 354 aaPredicted RBP18.67■□□□□ 0.58
SMARCB1-205ENST00000417137 DYNAPQ8N1N2 210 aa18.67■□□□□ 0.58
SMARCB1-205ENST00000417137 LINC00311Q8N616 119 aa18.67■□□□□ 0.58
SMARCB1-205ENST00000417137 DCSTAMPQ9H295 470 aa18.67■□□□□ 0.58
SMARCB1-205ENST00000417137 GSTP1P09211 210 aaKnown RBP18.66■□□□□ 0.58
SMARCB1-205ENST00000417137 BRS3P32247 399 aa18.66■□□□□ 0.58
SMARCB1-205ENST00000417137 DYNLT3P51808 116 aa18.66■□□□□ 0.58
SMARCB1-205ENST00000417137 TMBIM6P55061 237 aa18.66■□□□□ 0.58
SMARCB1-205ENST00000417137 PITPNAQ00169 270 aa18.66■□□□□ 0.58
SMARCB1-205ENST00000417137 TPTE2P1Q5T6R2 138 aa18.66■□□□□ 0.58
SMARCB1-205ENST00000417137 RAB2BQ8WUD1 216 aa18.66■□□□□ 0.58
SMARCB1-205ENST00000417137 IL1F10Q8WWZ1 152 aa18.66■□□□□ 0.58
SMARCB1-205ENST00000417137 ACOT12Q8WYK0 555 aa18.66■□□□□ 0.58
SMARCB1-205ENST00000417137 GCDHQ92947 438 aaPredicted RBP18.66■□□□□ 0.58
SMARCB1-205ENST00000417137 RPEQ96AT9 228 aa18.66■□□□□ 0.58
SMARCB1-205ENST00000417137 S100A16Q96FQ6 103 aaKnown RBP18.66■□□□□ 0.58
SMARCB1-205ENST00000417137 BCL7BQ9BQE9 202 aa18.66■□□□□ 0.58
SMARCB1-205ENST00000417137 OCSTAMPQ9BR26 566 aa18.66■□□□□ 0.58
SMARCB1-205ENST00000417137 TRDCB7Z8K6 153 aa18.65■□□□□ 0.58
SMARCB1-205ENST00000417137 LY6LH3BQJ8 138 aa18.65■□□□□ 0.58
SMARCB1-205ENST00000417137 NOL3O60936 208 aaKnown RBP18.65■□□□□ 0.58
SMARCB1-205ENST00000417137 PAX6P26367 422 aa18.65■□□□□ 0.58
SMARCB1-205ENST00000417137 IL3RAP26951 378 aa18.65■□□□□ 0.58
SMARCB1-205ENST00000417137 MNDAP41218 407 aa18.65■□□□□ 0.58
SMARCB1-205ENST00000417137 HLA-DRB3P79483 266 aa18.65■□□□□ 0.58
SMARCB1-205ENST00000417137 MORN2Q502X0 79 aa18.65■□□□□ 0.58
SMARCB1-205ENST00000417137 PLA1AQ53H76 456 aa18.65■□□□□ 0.58
SMARCB1-205ENST00000417137 HACD4Q5VWC8 232 aa18.65■□□□□ 0.58
SMARCB1-205ENST00000417137 OR10V1Q8NGI7 309 aa18.65■□□□□ 0.58
SMARCB1-205ENST00000417137 AP3S1Q92572 193 aa18.65■□□□□ 0.58
SMARCB1-205ENST00000417137 SLC25A38Q96DW6 304 aa18.65■□□□□ 0.58
SMARCB1-205ENST00000417137 ABCG5Q9H222 651 aa18.65■□□□□ 0.58
SMARCB1-205ENST00000417137 A0A1W2PPE3 182 aa18.64■□□□□ 0.57
SMARCB1-205ENST00000417137 FAM181BA6NEQ2 426 aa18.64■□□□□ 0.57
SMARCB1-205ENST00000417137 GPR137BO60478 399 aa18.64■□□□□ 0.57
SMARCB1-205ENST00000417137 YPEL1O60688 119 aa18.64■□□□□ 0.57
SMARCB1-205ENST00000417137 KIR2DS4P43632 304 aa18.64■□□□□ 0.57
SMARCB1-205ENST00000417137 KIR2DS1Q14954 304 aa18.64■□□□□ 0.57
SMARCB1-205ENST00000417137 PNLIPRP3Q17RR3 467 aa18.64■□□□□ 0.57
SMARCB1-205ENST00000417137 UBE2NLQ5JXB2 153 aa18.64■□□□□ 0.57
SMARCB1-205ENST00000417137 LY6G6FQ5SQ64 297 aa18.64■□□□□ 0.57
SMARCB1-205ENST00000417137 LIAT1Q6ZQX7 453 aa18.64■□□□□ 0.57
SMARCB1-205ENST00000417137 SAMD12Q8N8I0 201 aa18.64■□□□□ 0.57
SMARCB1-205ENST00000417137 OR52L2PQ8NGH6 319 aa18.64■□□□□ 0.57
SMARCB1-205ENST00000417137 TOMM40LQ969M1 308 aa18.64■□□□□ 0.57
SMARCB1-205ENST00000417137 YPEL2Q96QA6 119 aa18.64■□□□□ 0.57
SMARCB1-205ENST00000417137 RAB18Q9NP72 206 aa18.64■□□□□ 0.57
SMARCB1-205ENST00000417137 PITPNC1Q9UKF7 332 aa18.64■□□□□ 0.57
SMARCB1-205ENST00000417137 TRAV18A0A075B6X5 111 aa18.63■□□□□ 0.57
SMARCB1-205ENST00000417137 FCGR3AP08637 254 aa18.63■□□□□ 0.57
SMARCB1-205ENST00000417137 HKR1P10072 659 aa18.63■□□□□ 0.57
SMARCB1-205ENST00000417137 RAB7AP51149 207 aa18.63■□□□□ 0.57
SMARCB1-205ENST00000417137 SRSF7Q16629 238 aaKnown RBP eCLIP18.63■□□□□ 0.57
SMARCB1-205ENST00000417137 ZNF260Q3ZCT1 412 aa18.63■□□□□ 0.57
SMARCB1-205ENST00000417137 MZT2AQ6P582 158 aa18.63■□□□□ 0.57
SMARCB1-205ENST00000417137 Q6ZPA2 131 aa18.63■□□□□ 0.57
SMARCB1-205ENST00000417137 SLC25A48Q6ZT89 311 aaKnown RBP18.63■□□□□ 0.57
SMARCB1-205ENST00000417137 CMTM3Q96MX0 182 aa18.63■□□□□ 0.57
SMARCB1-205ENST00000417137 HSPA12AO43301 675 aa18.62■□□□□ 0.57
SMARCB1-205ENST00000417137 LPLP06858 475 aa18.62■□□□□ 0.57
SMARCB1-205ENST00000417137 ZNF182P17025 639 aaPredicted RBP18.62■□□□□ 0.57
SMARCB1-205ENST00000417137 DTYMKP23919 212 aa18.62■□□□□ 0.57
SMARCB1-205ENST00000417137 ZBTB25P24278 435 aa18.62■□□□□ 0.57
SMARCB1-205ENST00000417137 PPP1CCP36873 323 aaKnown RBP18.62■□□□□ 0.57
SMARCB1-205ENST00000417137 RAB13P51153 203 aa18.62■□□□□ 0.57
SMARCB1-205ENST00000417137 GNG2P59768 71 aa18.62■□□□□ 0.57
SMARCB1-205ENST00000417137 LY6EQ16553 131 aa18.62■□□□□ 0.57
SMARCB1-205ENST00000417137 C5orf24Q7Z6I8 188 aa18.62■□□□□ 0.57
SMARCB1-205ENST00000417137 ZNF439Q8NDP4 499 aa18.62■□□□□ 0.57
SMARCB1-205ENST00000417137 OR4A4PQ8NGN8 299 aa18.62■□□□□ 0.57
SMARCB1-205ENST00000417137 PIFOQ8TCI5 191 aa18.62■□□□□ 0.57
SMARCB1-205ENST00000417137 COMMD3Q9UBI1 195 aa18.62■□□□□ 0.57
SMARCB1-205ENST00000417137 TMEM89A2RUT3 159 aa18.61■□□□□ 0.57
SMARCB1-205ENST00000417137 GAPDHP04406 335 aaKnown RBP18.61■□□□□ 0.57
SMARCB1-205ENST00000417137 SCTP09683 121 aa18.61■□□□□ 0.57
SMARCB1-205ENST00000417137 SOX6P35712 828 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms