RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 IGHV2-26A0A0B4J1V2 119 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 A6NJ64 397 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 SCGNO76038 276 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 APOA1P02647 267 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 AMY1AP04745 511 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 AMY2AP04746 511 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 GLAP06280 429 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 ZNF44P15621 663 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 FUT3P21217 361 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 GABRR1P24046 479 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 GDNFP39905 211 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 VEGFCP49767 419 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 SCN1BQ07699 218 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 KHDC1LQ5JSQ8 128 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 UBE2NLQ5JXB2 153 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 RAB12Q6IQ22 244 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 SAMD12Q8N8I0 201 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 OR56B1Q8NGI3 324 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 OR4P4Q8NGL7 312 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 OR13D1Q8NGV5 346 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 S100A16Q96FQ6 103 aaKnown RBP10.27□□□□□ -0.77
LINC00339-202ENST00000416769 NICN1Q9BSH3 213 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 ATG5Q9H1Y0 275 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 SPACA1Q9HBV2 294 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 RHBDL2Q9NX52 303 aa10.27□□□□□ -0.77
LINC00339-202ENST00000416769 A0A0A6YYD4 124 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 hCG_1809904A0A1W2PP81 198 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 A0A1W2PPE2 198 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 A0A1W2PPH5 198 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 A0A1W2PR64 198 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 A0A1W2PRV1 198 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 FOXI3A8MTJ6 420 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-202ENST00000416769 RAB27BO00194 218 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 SLC33A1O00400 549 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-202ENST00000416769 CTDSP2O14595 271 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 SOCS1O15524 211 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 OR7C1O76099 320 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-202ENST00000416769 BLVRBP30043 206 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-202ENST00000416769 DYNLT3P51808 116 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 TMEM50BP56557 158 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 ABCA11PQ4W5N1 156 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 ATAD3CQ5T2N8 411 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 PRAMEF5Q5TYX0 476 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 SIGIRRQ6IA17 410 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 CENPVQ7Z7K6 275 aaPredicted RBP10.26□□□□□ -0.77
LINC00339-202ENST00000416769 LINC00482Q8N8I6 264 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 OR10R2Q8NGX6 335 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 SLC25A38Q96DW6 304 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 ZNF714Q96N38 554 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 NEDD4LQ96PU5 975 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 DIABLOQ9NR28 239 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 RCC2Q9P258 522 aaKnown RBP10.26□□□□□ -0.77
LINC00339-202ENST00000416769 HSF4Q9ULV5 492 aa10.26□□□□□ -0.77
LINC00339-202ENST00000416769 TRAV24A0A0B4J272 114 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 MCRIP1C9JLW8 97 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 SIRPB1O00241 398 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 RGS5O15539 181 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 PSPNO60542 156 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 HPGDSO60760 199 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 PDCD6O75340 191 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 KCNJ3P48549 501 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 CD69Q07108 199 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 EGFEM1PQ0D2K5 195 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 RBM39Q14498 530 aaKnown RBP10.25□□□□□ -0.77
LINC00339-202ENST00000416769 ARL6IP1Q15041 203 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 MRPL41Q8IXM3 137 aaKnown RBP10.25□□□□□ -0.77
LINC00339-202ENST00000416769 SUMF2Q8NBJ7 301 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 C6orf62Q9GZU0 229 aaPredicted RBP10.25□□□□□ -0.77
LINC00339-202ENST00000416769 MIXL1Q9H2W2 232 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 PLEKHJ1Q9NW61 149 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 ADAM30Q9UKF2 790 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 PITPNC1Q9UKF7 332 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 TSSC4Q9Y5U2 329 aaPredicted RBP10.25□□□□□ -0.77
LINC00339-202ENST00000416769 PEX16Q9Y5Y5 336 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 STAB2Q8WWQ8 2551 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 RYR2Q92736 4967 aa10.25□□□□□ -0.77
LINC00339-202ENST00000416769 DYNC2H1Q8NCM8 4307 aaKnown RBP10.24□□□□□ -0.77
LINC00339-202ENST00000416769 FAM25AB3EWG3 89 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 FAM25CB3EWG5 89 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 FAM25GB3EWG6 89 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 XRCC3O43542 346 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 TPPPO94811 219 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 EIF4EP06730 217 aaKnown RBP10.24□□□□□ -0.77
LINC00339-202ENST00000416769 ELK1P19419 428 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 CHATP28329 748 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 MOGAT2Q3SYC2 334 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 PAN3Q58A45 887 aaKnown RBP10.24□□□□□ -0.77
LINC00339-202ENST00000416769 GDPD3Q7L5L3 318 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 ZNF329Q86UD4 541 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 OR8H2Q8N162 312 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 RAB3CQ96E17 227 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 RCC1LQ96I51 464 aaKnown RBP10.24□□□□□ -0.77
LINC00339-202ENST00000416769 WWC2-AS2Q96NR7 200 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 DUX3Q96PT4 197 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 SLC25A33Q9BSK2 321 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 DPCDQ9BVM2 203 aaPredicted RBP10.24□□□□□ -0.77
LINC00339-202ENST00000416769 PECRQ9BY49 303 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 TMEM133Q9H2Q1 129 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 ZNF581Q9P0T4 197 aa10.24□□□□□ -0.77
LINC00339-202ENST00000416769 SESN1Q9Y6P5 492 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms