RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 TRAV9-1A0A075B6T8 112 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 A0A0G2JRQ6 117 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 SMCO3A2RU48 225 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 LRP5LA4QPB2 252 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 ZNF850A8MQ14 1090 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 C1QTNF9BB2RNN3 333 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 C9orf172C9J069 976 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 TNFSF11O14788 317 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 LINC01565O15544 149 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 ADAM20O43506 726 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 PGLYRP1O75594 196 aaPredicted RBP2.67□□□□□ -1.98
CUL3-204ENST00000409777 HRASP01112 189 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 MMP7P09237 267 aaPredicted RBP2.67□□□□□ -1.98
CUL3-204ENST00000409777 METTL15P1P0C7V9 234 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 EN2P19622 333 aaPredicted RBP2.67□□□□□ -1.98
CUL3-204ENST00000409777 TCN2P20062 427 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 CD27P26842 260 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 YPEL3P61236 119 aaPredicted RBP2.67□□□□□ -1.98
CUL3-204ENST00000409777 RPL23AP62750 156 aaKnown RBP2.67□□□□□ -1.98
CUL3-204ENST00000409777 RPL23P62829 140 aaKnown RBP2.67□□□□□ -1.98
CUL3-204ENST00000409777 RUNX1Q01196 453 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 ARL16Q0P5N6 197 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 SLC10A1Q14973 349 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 PIGYQ3MUY2 71 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 PHLDA2Q53GA4 152 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 RIPPLY2Q5TAB7 128 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 TEX43Q6ZNM6 134 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 CMTM1Q8IZ96 169 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 OR5D18Q8NGL1 313 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 OR1F12Q8NHA8 337 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 APOBEC3DQ96AK3 386 aaPredicted RBP2.67□□□□□ -1.98
CUL3-204ENST00000409777 TMEM45BQ96B21 275 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 SPACA9Q96E40 222 aaPredicted RBP2.67□□□□□ -1.98
CUL3-204ENST00000409777 DNAJA3Q96EY1 480 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 RAX2Q96IS3 184 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 RBM14Q96PK6 669 aaKnown RBP2.67□□□□□ -1.98
CUL3-204ENST00000409777 RASL10BQ96S79 203 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 NUDT22Q9BRQ3 303 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 SNHG12Q9BXW3 62 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 WDR61Q9GZS3 305 aaKnown RBP2.67□□□□□ -1.98
CUL3-204ENST00000409777 GPR173Q9NS66 373 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 TMEM38BQ9NVV0 291 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 OR6C3Q9NZP0 311 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 MYOTQ9UBF9 498 aa2.67□□□□□ -1.98
CUL3-204ENST00000409777 MRPS18CQ9Y3D5 142 aaKnown RBP2.67□□□□□ -1.98
CUL3-204ENST00000409777 TDRD6O60522 2096 aaKnown RBP2.67□□□□□ -1.98
CUL3-204ENST00000409777 PRRC2BQ5JSZ5 2229 aaKnown RBP2.67□□□□□ -1.98
CUL3-204ENST00000409777 IGHV1OR15-9A0A0B4J2B8 117 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 EPOPA6NHQ4 379 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 MARCH11A6NNE9 402 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 ZNF716A6NP11 495 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 C22orf46C9J442 243 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 SPRY1O43609 319 aaPredicted RBP2.66□□□□□ -1.98
CUL3-204ENST00000409777 TLX3O43711 291 aaPredicted RBP2.66□□□□□ -1.98
CUL3-204ENST00000409777 CHST1O43916 411 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 SSSCA1O60232 199 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 ZIC3O60481 467 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 MMP23AO75900 390 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 ACTL6BO94805 426 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 GOSR1O95249 250 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 CD55P08174 381 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 F2RP25116 425 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 OPRM1P35372 400 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 CLDN17P56750 224 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 NXPH1P58417 271 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 LINC00310P59036 64 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 ERVFC1-1P60608 527 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 FGF12P61328 243 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 ARF1P84077 181 aaKnown RBP2.66□□□□□ -1.98
CUL3-204ENST00000409777 FOXL1Q12952 345 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 ZNF154Q13106 437 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 C1orf61Q13536 156 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 TMEM241Q24JQ0 296 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 ACOT6Q3I5F7 207 aaPredicted RBP2.66□□□□□ -1.98
CUL3-204ENST00000409777 PDLIM3Q53GG5 364 aaPredicted RBP2.66□□□□□ -1.98
CUL3-204ENST00000409777 AKIRIN2Q53H80 203 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 ZNF542PQ5EBM4 170 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 TMEM31Q5JXX7 168 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 AKR1C8PQ5T2L2 129 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 C16orf47Q6ZP98 133 aaPredicted RBP2.66□□□□□ -1.98
CUL3-204ENST00000409777 TGIF2LXQ8IUE1 241 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 AGBL5Q8NDL9 886 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 CADM4Q8NFZ8 388 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 MRPL30Q8TCC3 161 aaKnown RBP2.66□□□□□ -1.98
CUL3-204ENST00000409777 DYRK2Q92630 601 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 GPR146Q96CH1 333 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 JSRP1Q96MG2 331 aaPredicted RBP2.66□□□□□ -1.98
CUL3-204ENST00000409777 MAGT1Q9H0U3 335 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 WNT5BQ9H1J7 359 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 RIMS4Q9H426 269 aaPredicted RBP2.66□□□□□ -1.98
CUL3-204ENST00000409777 VSIRQ9H7M9 311 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 MANBALQ9NQG1 85 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 PCSK5Q92824 1860 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 MED19A0JLT2 244 aaPredicted RBP2.66□□□□□ -1.98
CUL3-204ENST00000409777 M0QZK8 103 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 TCAPO15273 167 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 NRASP01111 189 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 IGKV1D-33P01593 117 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 IGKV1-33P01594 117 aa2.66□□□□□ -1.98
CUL3-204ENST00000409777 IGKV1-5P01602 117 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms