RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 CT45A3Q8NHU0 189 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 CCDC107Q8WV48 283 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 TSEN15Q8WW01 171 aaKnown RBP6.8□□□□□ -1.32
CAPN3-208ENST00000397204 LGALS12Q96DT0 336 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 PDCD1LG2Q9BQ51 273 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 HSPB9Q9BQS6 159 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 ALG8Q9BVK2 526 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 KLK15Q9H2R5 256 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 ZMAT4Q9H898 229 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 ISG20L2Q9H9L3 353 aaKnown RBP6.8□□□□□ -1.32
CAPN3-208ENST00000397204 IL36GQ9NZH8 169 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 ZNF107Q9UII5 783 aaPredicted RBP6.8□□□□□ -1.32
CAPN3-208ENST00000397204 OAZ3Q9UMX2 235 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 ING4Q9UNL4 249 aa6.8□□□□□ -1.32
CAPN3-208ENST00000397204 LCE6AA0A183 80 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 E9PI62 339 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 OVOL1O14753 267 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 GEMIN2O14893 280 aaKnown RBP6.79□□□□□ -1.32
CAPN3-208ENST00000397204 LANCL1O43813 399 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 ZNF780AO75290 641 aaPredicted RBP6.79□□□□□ -1.32
CAPN3-208ENST00000397204 CDRT1O95170 752 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 CD2P06729 351 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 RAB9AP51151 201 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 ZNF134P52741 427 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 ASPHD1Q5U4P2 390 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 LPCAT4Q643R3 524 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 STX19Q8N4C7 294 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 ZNF439Q8NDP4 499 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 OR51A2Q8NGJ7 313 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 GPR148Q8TDV2 347 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 DCUN1D4Q92564 292 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 Q96MT0 163 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 S100A13Q99584 98 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 FAM192AQ9GZU8 254 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 OR51J1Q9H342 316 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 GHITMQ9H3K2 345 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 GNB4Q9HAV0 340 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 SPACA1Q9HBV2 294 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 PALMDQ9NP74 551 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 TMEM138Q9NPI0 162 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 ERVK13-1Q9NX77 482 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 ERGIC3Q9Y282 383 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 ORC6Q9Y5N6 252 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 GMPPBQ9Y5P6 360 aa6.79□□□□□ -1.32
CAPN3-208ENST00000397204 IGHV3-43A0A0B4J1X8 118 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 C12orf77C9JDV5 145 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 SLC31A2O15432 143 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 HLA-DRB1P01911 266 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 ALPLP05186 524 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 FRMD6-AS1P0C7T7 363 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 IGHV3-43DP0DP04 118 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 GTF2F2P13984 249 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 ZNF93P35789 620 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-208ENST00000397204 SOX2P48431 317 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 RASSF2P50749 326 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 RAB40BQ12829 278 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 GPR176Q14439 515 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 CCDC58Q4VC31 144 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 ATAD3CQ5T2N8 411 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 C6orf183Q5T699 404 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 SYT6Q5T7P8 510 aaPredicted RBP6.78□□□□□ -1.32
CAPN3-208ENST00000397204 C1orf146Q5VVC0 180 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 LIN54Q6MZP7 749 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 TRAT1Q6PIZ9 186 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 MINDY2Q8NBR6 621 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 RHOXF1Q8NHV9 184 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 UBALD1Q8TB05 177 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 NEK7Q8TDX7 302 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 MRPS18AQ9NVS2 196 aaKnown RBP6.78□□□□□ -1.32
CAPN3-208ENST00000397204 ZNF581Q9P0T4 197 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 GNG12Q9UBI6 72 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 TRAPPC2LQ9UL33 140 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 WSB1Q9Y6I7 421 aa6.78□□□□□ -1.32
CAPN3-208ENST00000397204 TRAV41A0A0B4J266 112 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 SAC3D1A6NKF1 404 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 MCRIP1C9JLW8 97 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 LINC01619G3V211 115 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 G3V318 75 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 AIPO00170 330 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 ARPC1BO15143 372 aaKnown RBP6.77□□□□□ -1.33
CAPN3-208ENST00000397204 SAP30O75446 220 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 CA11O75493 328 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 GPX5O75715 221 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 GLAP06280 429 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 SLC2A2P11168 524 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-208ENST00000397204 SPNP16150 400 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 GNB1P62873 340 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 PPP3R1P63098 170 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 LSAMPQ13449 338 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 MMDQ15546 238 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 FAM53AQ6NSI3 398 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-208ENST00000397204 RPL22L1Q6P5R6 122 aaKnown RBP6.77□□□□□ -1.33
CAPN3-208ENST00000397204 OVCH2Q7RTZ1 564 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 ZNF554Q86TJ5 538 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 GAPTQ8N292 157 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 OR6Q1Q8NGQ2 317 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 DLX4Q92988 240 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-208ENST00000397204 TMEM106AQ96A25 262 aa6.77□□□□□ -1.33
CAPN3-208ENST00000397204 MRPS24Q96EL2 167 aaKnown RBP6.77□□□□□ -1.33
CAPN3-208ENST00000397204 OR5B12Q96R08 314 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms