RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 FAM172BPA6NC97 362 aa12.91□□□□□ -0.34
CLTA-203ENST00000396603 GEMIN2O14893 280 aaKnown RBP12.91□□□□□ -0.34
CLTA-203ENST00000396603 AIREO43918 545 aa12.91□□□□□ -0.34
CLTA-203ENST00000396603 GADD45AP24522 165 aa12.91□□□□□ -0.34
CLTA-203ENST00000396603 MYCNOSP40205 109 aa12.91□□□□□ -0.34
CLTA-203ENST00000396603 THBS3P49746 956 aa12.91□□□□□ -0.34
CLTA-203ENST00000396603 KRTAP10-11P60412 298 aa12.91□□□□□ -0.34
CLTA-203ENST00000396603 RPL23AP62750 156 aaKnown RBP12.91□□□□□ -0.34
CLTA-203ENST00000396603 SLC35B1P78383 322 aa12.91□□□□□ -0.34
CLTA-203ENST00000396603 ATXN7L3Q14CW9 347 aaPredicted RBP12.91□□□□□ -0.34
CLTA-203ENST00000396603 ATAD3CQ5T2N8 411 aa12.91□□□□□ -0.34
CLTA-203ENST00000396603 ETV3LQ6ZN32 361 aa12.91□□□□□ -0.34
CLTA-203ENST00000396603 C5orf56Q8N8D9 126 aa12.91□□□□□ -0.34
CLTA-203ENST00000396603 NEK7Q8TDX7 302 aa12.91□□□□□ -0.34
CLTA-203ENST00000396603 B9D2Q9BPU9 175 aa12.91□□□□□ -0.34
CLTA-203ENST00000396603 DPCDQ9BVM2 203 aaPredicted RBP12.91□□□□□ -0.34
CLTA-203ENST00000396603 BANF2Q9H503 90 aa12.91□□□□□ -0.34
CLTA-203ENST00000396603 IDI2-AS1Q9NZ38 188 aa12.91□□□□□ -0.34
CLTA-203ENST00000396603 COL7A1Q02388 2944 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 TRAV24A0A0B4J272 114 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 A0A1W2PPI3 338 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 IFITM5A6NNB3 132 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 NOTOA8MTQ0 251 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 MCRIP1C9JLW8 97 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 AIPO00170 330 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 TMEM127O75204 238 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 IGHG2P01859 326 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 SNRNP70P08621 437 aaKnown RBP12.9□□□□□ -0.34
CLTA-203ENST00000396603 VSIG8P0DPA2 414 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 FUT3P21217 361 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 EBI3Q14213 229 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 C9orf152Q5JTZ5 239 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 C10orf99Q6UWK7 81 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 SUMF2Q8NBJ7 301 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 TMEM104Q8NE00 496 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 FAM46BQ96A09 425 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 FAM3DQ96BQ1 224 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 Q96M66 194 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 NEDD4LQ96PU5 975 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 RAB9BQ9NP90 201 aa12.9□□□□□ -0.34
CLTA-203ENST00000396603 MEIKINA0A087WXM9 373 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 A0A1W2PP11 408 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 WI2-2373I1.2A0A1W2PRP0 233 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 TMEM14DPA8MWL7 114 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 HSPB6O14558 160 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 CA11O75493 328 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 SMIM18P0DKX4 95 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 TMEM11P17152 192 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 NFYBP25208 207 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 GLP1RP43220 463 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 RPS27AP62979 156 aaKnown RBP12.89□□□□□ -0.35
CLTA-203ENST00000396603 P2RY14Q15391 338 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 DEFB121Q5J5C9 76 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 CROCCP3Q8IVE0 287 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 FOXRED2Q8IWF2 684 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 C8orf31Q8N9H6 132 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 OR56B4Q8NH76 319 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 YIPF6Q96EC8 236 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 P2RX4Q99571 388 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 GFI1Q99684 422 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 GON7Q9BXV9 100 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 RCC2Q9P258 522 aaKnown RBP12.89□□□□□ -0.35
CLTA-203ENST00000396603 KIF25Q9UIL4 384 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 PSG11Q9UQ72 335 aa12.89□□□□□ -0.35
CLTA-203ENST00000396603 TMEM30CPA0ZSE6 113 aa12.88□□□□□ -0.35
CLTA-203ENST00000396603 PDCD6O75340 191 aa12.88□□□□□ -0.35
CLTA-203ENST00000396603 CD69Q07108 199 aa12.88□□□□□ -0.35
CLTA-203ENST00000396603 ZNF816Q0VGE8 651 aaPredicted RBP12.88□□□□□ -0.35
CLTA-203ENST00000396603 Q3ZCU0 254 aa12.88□□□□□ -0.35
CLTA-203ENST00000396603 HES5Q5TA89 166 aa12.88□□□□□ -0.35
CLTA-203ENST00000396603 RSBN1Q5VWQ0 802 aaPredicted RBP12.88□□□□□ -0.35
CLTA-203ENST00000396603 RAB12Q6IQ22 244 aa12.88□□□□□ -0.35
CLTA-203ENST00000396603 DRAM1Q8N682 238 aa12.88□□□□□ -0.35
CLTA-203ENST00000396603 OR13A1Q8NGR1 328 aa12.88□□□□□ -0.35
CLTA-203ENST00000396603 OR13F1Q8NGS4 319 aa12.88□□□□□ -0.35
CLTA-203ENST00000396603 TM2D1Q9BX74 207 aa12.88□□□□□ -0.35
CLTA-203ENST00000396603 RAB22AQ9UL26 194 aa12.88□□□□□ -0.35
CLTA-203ENST00000396603 PEX16Q9Y5Y5 336 aa12.88□□□□□ -0.35
CLTA-203ENST00000396603 SH2D7A6NKC9 451 aaPredicted RBP12.87□□□□□ -0.35
CLTA-203ENST00000396603 SERPINE3A8MV23 424 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 RAMP3O60896 148 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 GZMHP20718 246 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 SDC2P34741 201 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 SCAND1P57086 179 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 OR10A3P58181 314 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 QRFPP83859 136 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 HES1Q14469 280 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 C2orf76Q3KRA6 126 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 GPR141Q7Z602 305 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 SLC35E3Q7Z769 313 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 TGIF2LXQ8IUE1 241 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 IZUMO1Q8IYV9 350 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 OR56B1Q8NGI3 324 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 OR52M1Q8NGK5 317 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 OR10X1Q8NGY0 326 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 WWC2-AS2Q96NR7 200 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 CENPOQ9BU64 300 aa12.87□□□□□ -0.35
CLTA-203ENST00000396603 SHISA3A0PJX4 238 aa12.86□□□□□ -0.35
CLTA-203ENST00000396603 METTL21EPA6NDL7 271 aa12.86□□□□□ -0.35
CLTA-203ENST00000396603 AP4M1O00189 453 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms