RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 FBN3Q75N90 2809 aa10.15□□□□□ -0.78
GGPS1-203ENST00000391855 TRBV6-6A0A0A6YYG2 114 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 IGHV3-43A0A0B4J1X8 118 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 IGHV3-43DP0DP04 118 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 ZNF137PP52743 207 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 CLDN12P56749 244 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 HABP2Q14520 560 aaPredicted RBP10.15□□□□□ -0.79
GGPS1-203ENST00000391855 C2orf76Q3KRA6 126 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 HES5Q5TA89 166 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 C22orf42Q6IC83 251 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 ZNF880Q6PDB4 577 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 SLC25A48Q6ZT89 311 aaKnown RBP10.15□□□□□ -0.79
GGPS1-203ENST00000391855 TPRA1Q86W33 373 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 PRR18Q8N4B5 295 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 KLHDC1Q8N7A1 406 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 ZNF439Q8NDP4 499 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 OR56B4Q8NH76 319 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 OR1L1Q8NH94 360 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 UBALD1Q8TB05 177 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 CFHR4Q92496 578 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 GALMQ96C23 342 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 FAAP24Q9BTP7 215 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 CHMP1AQ9HD42 196 aaPredicted RBP10.15□□□□□ -0.79
GGPS1-203ENST00000391855 VCX3AQ9NNX9 186 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 C12orf4Q9NQ89 552 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 OR2S2Q9NQN1 319 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 MOB4Q9Y3A3 225 aa10.15□□□□□ -0.79
GGPS1-203ENST00000391855 A0A0A6YYD4 124 aa10.14□□□□□ -0.79
GGPS1-203ENST00000391855 A0A1W2PPE3 182 aa10.14□□□□□ -0.79
GGPS1-203ENST00000391855 FOXI3A8MTJ6 420 aaPredicted RBP10.14□□□□□ -0.79
GGPS1-203ENST00000391855 YPEL1O60688 119 aa10.14□□□□□ -0.79
GGPS1-203ENST00000391855 PEX14O75381 377 aa10.14□□□□□ -0.79
GGPS1-203ENST00000391855 RAB6AP20340 208 aa10.14□□□□□ -0.79
GGPS1-203ENST00000391855 VDAC2P45880 294 aaPredicted RBP10.14□□□□□ -0.79
GGPS1-203ENST00000391855 KRTAP10-3P60369 221 aa10.14□□□□□ -0.79
GGPS1-203ENST00000391855 IZUMO1Q8IYV9 350 aa10.14□□□□□ -0.79
GGPS1-203ENST00000391855 DRAM1Q8N682 238 aa10.14□□□□□ -0.79
GGPS1-203ENST00000391855 PTX4Q96A99 478 aa10.14□□□□□ -0.79
GGPS1-203ENST00000391855 YPEL2Q96QA6 119 aa10.14□□□□□ -0.79
GGPS1-203ENST00000391855 SERTAD4Q9NUC0 356 aa10.14□□□□□ -0.79
GGPS1-203ENST00000391855 TXNL4BQ9NX01 149 aaKnown RBP10.14□□□□□ -0.79
GGPS1-203ENST00000391855 SIGLEC9Q9Y336 463 aa10.14□□□□□ -0.79
GGPS1-203ENST00000391855 IGHV1-3A0A0C4DH29 117 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 TMEM272A0A1B0GTI8 110 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 SHISA3A0PJX4 238 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 NOTOA8MTQ0 251 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 SOCS1O15524 211 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 TNFAIP8O95379 198 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 SNRNP70P08621 437 aaKnown RBP10.13□□□□□ -0.79
GGPS1-203ENST00000391855 TMEM11P17152 192 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 GADD45AP24522 165 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 CD24P25063 80 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 VEGFCP49767 419 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 OR10A3P58181 314 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 MRPS15P82914 257 aaKnown RBP10.13□□□□□ -0.79
GGPS1-203ENST00000391855 SRSF4Q08170 494 aaKnown RBP10.13□□□□□ -0.79
GGPS1-203ENST00000391855 ARL6IP1Q15041 203 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 C2orf68Q2NKX9 166 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 TIMM50Q3ZCQ8 353 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 TREML4Q6UXN2 200 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 TGIF2LXQ8IUE1 241 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 RTN4IP1Q8WWV3 396 aaPredicted RBP10.13□□□□□ -0.79
GGPS1-203ENST00000391855 ST6GALNAC6Q969X2 333 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 KCTD7Q96MP8 289 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 ABHD14AQ9BUJ0 271 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 MMP27Q9H306 513 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 AK3Q9UIJ7 227 aa10.13□□□□□ -0.79
GGPS1-203ENST00000391855 A0A087WXM4 84 aa10.12□□□□□ -0.79
GGPS1-203ENST00000391855 METTL21EPA6NDL7 271 aa10.12□□□□□ -0.79
GGPS1-203ENST00000391855 FGF16O43320 207 aa10.12□□□□□ -0.79
GGPS1-203ENST00000391855 VSIG10L2P0DP72 767 aa10.12□□□□□ -0.79
GGPS1-203ENST00000391855 BLCAPP62952 87 aa10.12□□□□□ -0.79
GGPS1-203ENST00000391855 HLA-DRB3P79483 266 aa10.12□□□□□ -0.79
GGPS1-203ENST00000391855 EBI3Q14213 229 aa10.12□□□□□ -0.79
GGPS1-203ENST00000391855 HES1Q14469 280 aa10.12□□□□□ -0.79
GGPS1-203ENST00000391855 NEDD8Q15843 81 aa10.12□□□□□ -0.79
GGPS1-203ENST00000391855 MORN2Q502X0 79 aa10.12□□□□□ -0.79
GGPS1-203ENST00000391855 MOB3BQ86TA1 216 aa10.12□□□□□ -0.79
GGPS1-203ENST00000391855 OR10V1Q8NGI7 309 aa10.12□□□□□ -0.79
GGPS1-203ENST00000391855 SETD6Q8TBK2 473 aa10.12□□□□□ -0.79
GGPS1-203ENST00000391855 ARHGAP5-AS1Q96IT6 56 aa10.12□□□□□ -0.79
GGPS1-203ENST00000391855 CMSS1Q9BQ75 279 aaKnown RBP10.12□□□□□ -0.79
GGPS1-203ENST00000391855 PECRQ9BY49 303 aa10.12□□□□□ -0.79
GGPS1-203ENST00000391855 WNT10AQ9GZT5 417 aa10.12□□□□□ -0.79
GGPS1-203ENST00000391855 ITGB1BP1O14713 200 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 SLC31A2O15432 143 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 LANCL1O43813 399 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 SCGNO76038 276 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 IGKV1D-33P01593 117 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 IGKV1-33P01594 117 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 CD1BP29016 333 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 TMEM50BP56557 158 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 DIAPH2-AS1Q14236 149 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 CT45A1Q5HYN5 189 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 FAM71F2Q6NXP2 309 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 LYG1Q8N1E2 194 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 OR2AK2Q8NG84 335 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 OR8H1Q8NGG4 311 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 OR52L2PQ8NGH6 319 aa10.11□□□□□ -0.79
GGPS1-203ENST00000391855 OR2T10Q8NGZ9 312 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms